RNA–Protein interactions for RNA: ENST00000337392.9

CLPTM1-201, Transcript of CLPTM1, transmembrane protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLPTM1, Length 2,604 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1-201ENST00000337392 ELOVL5Q9NYP7 299 aa18.99■□□□□ 0.63
CLPTM1-201ENST00000337392 SHISA9B4DS77 424 aa18.98■□□□□ 0.63
CLPTM1-201ENST00000337392 FAM90A26D6RGX4 464 aa18.98■□□□□ 0.63
CLPTM1-201ENST00000337392 HINT2Q9BX68 163 aa18.98■□□□□ 0.63
CLPTM1-201ENST00000337392 SMCO3A2RU48 225 aa18.98■□□□□ 0.63
CLPTM1-201ENST00000337392 UBE2CO00762 179 aa18.98■□□□□ 0.63
CLPTM1-201ENST00000337392 HPRT1P00492 218 aa18.98■□□□□ 0.63
CLPTM1-201ENST00000337392 MRPS11P82912 194 aaKnown RBP18.98■□□□□ 0.63
CLPTM1-201ENST00000337392 RELQ04864 619 aaPredicted RBP18.98■□□□□ 0.63
CLPTM1-201ENST00000337392 OR4A16Q8NH70 328 aa18.98■□□□□ 0.63
CLPTM1-201ENST00000337392 SLC25A10Q9UBX3 287 aaPredicted RBP18.98■□□□□ 0.63
CLPTM1-201ENST00000337392 PIEZO1Q92508 2521 aa18.98■□□□□ 0.63
CLPTM1-201ENST00000337392 OR10P1Q8NGE3 313 aa18.97■□□□□ 0.63
CLPTM1-201ENST00000337392 LFNGQ8NES3 379 aa18.97■□□□□ 0.63
CLPTM1-201ENST00000337392 TMEM170AQ8WVE7 144 aa18.97■□□□□ 0.63
CLPTM1-201ENST00000337392 ZCCHC14Q8WYQ9 949 aaKnown RBP18.97■□□□□ 0.63
CLPTM1-201ENST00000337392 DDB2Q92466 427 aa18.97■□□□□ 0.63
CLPTM1-201ENST00000337392 MSRB2Q9Y3D2 182 aa18.97■□□□□ 0.63
CLPTM1-201ENST00000337392 hCG_1809904A0A1W2PP81 198 aa18.96■□□□□ 0.63
CLPTM1-201ENST00000337392 A0A1W2PR64 198 aa18.96■□□□□ 0.63
CLPTM1-201ENST00000337392 A0A1W2PRV1 198 aa18.96■□□□□ 0.63
CLPTM1-201ENST00000337392 IFNA10P01566 189 aa18.96■□□□□ 0.63
CLPTM1-201ENST00000337392 RELBQ01201 579 aa18.96■□□□□ 0.63
CLPTM1-201ENST00000337392 RHOVQ96L33 236 aa18.96■□□□□ 0.63
CLPTM1-201ENST00000337392 PFDN5Q99471 154 aa18.96■□□□□ 0.63
CLPTM1-201ENST00000337392 RPL31P62899 125 aaKnown RBP18.96■□□□□ 0.63
CLPTM1-201ENST00000337392 FAM24BQ8N5W8 94 aa18.96■□□□□ 0.63
CLPTM1-201ENST00000337392 CTSZQ9UBR2 303 aa18.96■□□□□ 0.63
CLPTM1-201ENST00000337392 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP18.95■□□□□ 0.62
CLPTM1-201ENST00000337392 H3BQ15 152 aa18.95■□□□□ 0.62
CLPTM1-201ENST00000337392 LY6HO94772 140 aa18.95■□□□□ 0.62
CLPTM1-201ENST00000337392 RAB11AP62491 216 aa18.95■□□□□ 0.62
CLPTM1-201ENST00000337392 C21orf62-AS1Q17RA5 79 aa18.95■□□□□ 0.62
CLPTM1-201ENST00000337392 FAM122AQ96E09 287 aa18.95■□□□□ 0.62
CLPTM1-201ENST00000337392 HEYLQ9NQ87 328 aaPredicted RBP18.95■□□□□ 0.62
CLPTM1-201ENST00000337392 PIGBOS1A0A0B4J2F0 54 aa18.95■□□□□ 0.62
CLPTM1-201ENST00000337392 SRRM4A7MD48 611 aaKnown RBP18.95■□□□□ 0.62
CLPTM1-201ENST00000337392 ZNF439Q8NDP4 499 aa18.95■□□□□ 0.62
CLPTM1-201ENST00000337392 RNASE6Q93091 150 aaKnown RBP18.95■□□□□ 0.62
CLPTM1-201ENST00000337392 DYNLRB1Q9NP97 96 aa18.95■□□□□ 0.62
CLPTM1-201ENST00000337392 IDI2-AS1Q9NZ38 188 aa18.95■□□□□ 0.62
CLPTM1-201ENST00000337392 CFAP46Q8IYW2 2715 aa18.95■□□□□ 0.62
CLPTM1-201ENST00000337392 MAP1LC3B2A6NCE7 125 aa18.94■□□□□ 0.62
CLPTM1-201ENST00000337392 TNFRSF1AP19438 455 aa18.94■□□□□ 0.62
CLPTM1-201ENST00000337392 OR4A47Q6IF82 309 aa18.94■□□□□ 0.62
CLPTM1-201ENST00000337392 MAP1LC3BQ9GZQ8 125 aa18.94■□□□□ 0.62
CLPTM1-201ENST00000337392 SIAH2O43255 324 aa18.94■□□□□ 0.62
CLPTM1-201ENST00000337392 TEX36Q5VZQ5 186 aa18.94■□□□□ 0.62
CLPTM1-201ENST00000337392 NPCDR1Q9BY65 106 aa18.94■□□□□ 0.62
CLPTM1-201ENST00000337392 URGCP-MRPS24S4R325 110 aa18.94■□□□□ 0.62
CLPTM1-201ENST00000337392 TMEM178BH3BS89 294 aa18.93■□□□□ 0.62
CLPTM1-201ENST00000337392 NQO2P16083 231 aa18.93■□□□□ 0.62
CLPTM1-201ENST00000337392 RAB39BQ96DA2 213 aa18.93■□□□□ 0.62
CLPTM1-201ENST00000337392 CRYBG3Q68DQ2 2970 aa18.93■□□□□ 0.62
CLPTM1-201ENST00000337392 SOX15O60248 233 aa18.93■□□□□ 0.62
CLPTM1-201ENST00000337392 SFTPCP11686 197 aa18.93■□□□□ 0.62
CLPTM1-201ENST00000337392 RAB5BP61020 215 aa18.93■□□□□ 0.62
CLPTM1-201ENST00000337392 FFAR4Q5NUL3 377 aa18.93■□□□□ 0.62
CLPTM1-201ENST00000337392 TMEM200BQ69YZ2 307 aa18.93■□□□□ 0.62
CLPTM1-201ENST00000337392 ZNF343Q6P1L6 599 aa18.93■□□□□ 0.62
CLPTM1-201ENST00000337392 PKD1L2Q7Z442 2459 aa18.93■□□□□ 0.62
CLPTM1-201ENST00000337392 CT45A6P0DMU7 189 aa18.92■□□□□ 0.62
CLPTM1-201ENST00000337392 CT45A5P0DMU8 189 aa18.92■□□□□ 0.62
CLPTM1-201ENST00000337392 CT45A7P0DMV0 189 aa18.92■□□□□ 0.62
CLPTM1-201ENST00000337392 ERVK-16P61578 105 aa18.92■□□□□ 0.62
CLPTM1-201ENST00000337392 TMEM41BQ5BJD5 291 aa18.92■□□□□ 0.62
CLPTM1-201ENST00000337392 HIST1H2BAQ96A08 127 aa18.92■□□□□ 0.62
CLPTM1-201ENST00000337392 TMEM147Q9BVK8 224 aa18.92■□□□□ 0.62
CLPTM1-201ENST00000337392 SMCO4Q9NRQ5 59 aa18.92■□□□□ 0.62
CLPTM1-201ENST00000337392 TMEM106BQ9NUM4 274 aa18.92■□□□□ 0.62
CLPTM1-201ENST00000337392 CSMD2Q7Z408 3487 aa18.92■□□□□ 0.62
CLPTM1-201ENST00000337392 PPIAL4EA0A075B759 164 aa18.92■□□□□ 0.62
CLPTM1-201ENST00000337392 PPIAL4DF5H284 164 aa18.92■□□□□ 0.62
CLPTM1-201ENST00000337392 PPIAL4FP0DN26 164 aa18.92■□□□□ 0.62
CLPTM1-201ENST00000337392 ZNF506Q5JVG8 444 aa18.92■□□□□ 0.62
CLPTM1-201ENST00000337392 ZNF429Q86V71 674 aa18.92■□□□□ 0.62
CLPTM1-201ENST00000337392 LHX4Q969G2 390 aa18.92■□□□□ 0.62
CLPTM1-201ENST00000337392 LAMP3Q9UQV4 416 aa18.92■□□□□ 0.62
CLPTM1-201ENST00000337392 PPIAL4AQ9Y536 164 aa18.92■□□□□ 0.62
CLPTM1-201ENST00000337392 TRAV38-1A0A0B4J264 116 aa18.91■□□□□ 0.62
CLPTM1-201ENST00000337392 LOC102723971A0A1B0GUV8 181 aa18.91■□□□□ 0.62
CLPTM1-201ENST00000337392 DEFA6Q01524 100 aa18.91■□□□□ 0.62
CLPTM1-201ENST00000337392 RNF212Q495C1 297 aa18.91■□□□□ 0.62
CLPTM1-201ENST00000337392 PSMG3Q9BT73 122 aaPredicted RBP18.91■□□□□ 0.62
CLPTM1-201ENST00000337392 RPUSD1Q9UJJ7 312 aaKnown RBP18.91■□□□□ 0.62
CLPTM1-201ENST00000337392 TCF19Q9Y242 345 aa18.91■□□□□ 0.62
CLPTM1-201ENST00000337392 DMRT1Q9Y5R6 373 aa18.91■□□□□ 0.62
CLPTM1-201ENST00000337392 TMPRSS3P57727 454 aa18.91■□□□□ 0.62
CLPTM1-201ENST00000337392 MOB3BQ86TA1 216 aa18.91■□□□□ 0.62
CLPTM1-201ENST00000337392 Q8N7P7 452 aa18.91■□□□□ 0.62
CLPTM1-201ENST00000337392 TMEM68Q96MH6 324 aa18.91■□□□□ 0.62
CLPTM1-201ENST00000337392 PATZ1Q9HBE1 687 aaKnown RBP18.91■□□□□ 0.62
CLPTM1-201ENST00000337392 SLC39A9Q9NUM3 307 aa18.91■□□□□ 0.62
CLPTM1-201ENST00000337392 WNK2Q9Y3S1 2297 aa18.91■□□□□ 0.62
CLPTM1-201ENST00000337392 UTP20O75691 2785 aaKnown RBP18.9■□□□□ 0.62
CLPTM1-201ENST00000337392 CLN5O75503 358 aa18.9■□□□□ 0.62
CLPTM1-201ENST00000337392 FABP9Q0Z7S8 132 aa18.9■□□□□ 0.62
CLPTM1-201ENST00000337392 CCL21O00585 134 aa18.9■□□□□ 0.62
CLPTM1-201ENST00000337392 OR10G4Q8NGN3 311 aa18.9■□□□□ 0.62
CLPTM1-201ENST00000337392 OR10G9Q8NGN4 311 aa18.9■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms