RNA–Protein interactions for RNA: ENST00000334490.5

C9orf47-201, Transcript of chromosome 9 open reading frame 47, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene C9orf47, Length 4,829 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf47-201ENST00000334490 CCL1P22362 96 aa12.64□□□□□ -0.39
C9orf47-201ENST00000334490 PEAR1Q5VY43 1037 aaPredicted RBP12.64□□□□□ -0.39
C9orf47-201ENST00000334490 HSD17B13Q7Z5P4 300 aaPredicted RBP12.64□□□□□ -0.39
C9orf47-201ENST00000334490 WDFY1Q8IWB7 410 aa12.64□□□□□ -0.39
C9orf47-201ENST00000334490 TUBD1Q9UJT1 453 aa12.64□□□□□ -0.39
C9orf47-201ENST00000334490 TFF1P04155 84 aa12.64□□□□□ -0.39
C9orf47-201ENST00000334490 PMCHP20382 165 aa12.64□□□□□ -0.39
C9orf47-201ENST00000334490 HOXA4Q00056 320 aaPredicted RBP12.64□□□□□ -0.39
C9orf47-201ENST00000334490 LYRM2Q9NU23 88 aaPredicted RBP12.64□□□□□ -0.39
C9orf47-201ENST00000334490 TANC1Q9C0D5 1861 aa12.63□□□□□ -0.39
C9orf47-201ENST00000334490 DGAT2L7PQ6IED9 249 aa12.63□□□□□ -0.39
C9orf47-201ENST00000334490 C11orf42Q8N5U0 333 aa12.63□□□□□ -0.39
C9orf47-201ENST00000334490 NPIPB3Q92617 1050 aa12.63□□□□□ -0.39
C9orf47-201ENST00000334490 AURKAIP1Q9NWT8 199 aaPredicted RBP12.63□□□□□ -0.39
C9orf47-201ENST00000334490 B3GALT5-AS1P59052 145 aa12.63□□□□□ -0.39
C9orf47-201ENST00000334490 KRTDAPP60985 99 aa12.63□□□□□ -0.39
C9orf47-201ENST00000334490 LAMTOR1Q6IAA8 161 aa12.63□□□□□ -0.39
C9orf47-201ENST00000334490 SLC16A13Q7RTY0 426 aa12.63□□□□□ -0.39
C9orf47-201ENST00000334490 RTN4RL2Q86UN3 420 aa12.63□□□□□ -0.39
C9orf47-201ENST00000334490 PAQR4Q8N4S7 273 aaPredicted RBP12.63□□□□□ -0.39
C9orf47-201ENST00000334490 SLC25A15Q9Y619 301 aa12.63□□□□□ -0.39
C9orf47-201ENST00000334490 ZNF146Q15072 292 aa12.63□□□□□ -0.39
C9orf47-201ENST00000334490 ZNF418Q8TF45 676 aaPredicted RBP12.63□□□□□ -0.39
C9orf47-201ENST00000334490 FAM210BQ96KR6 192 aa12.63□□□□□ -0.39
C9orf47-201ENST00000334490 C1QL1O75973 258 aa12.63□□□□□ -0.39
C9orf47-201ENST00000334490 TMEM78Q5T7P6 136 aa12.63□□□□□ -0.39
C9orf47-201ENST00000334490 RNASEKQ6P5S7 137 aaKnown RBP12.63□□□□□ -0.39
C9orf47-201ENST00000334490 H1FOOQ8IZA3 346 aaPredicted RBP12.63□□□□□ -0.39
C9orf47-201ENST00000334490 ARL2-SNX15V9GYD0 113 aa12.63□□□□□ -0.39
C9orf47-201ENST00000334490 TRGV3P03979 118 aa12.62□□□□□ -0.39
C9orf47-201ENST00000334490 PRNTQ86SH4 94 aa12.62□□□□□ -0.39
C9orf47-201ENST00000334490 TMEM218A2RU14 115 aa12.62□□□□□ -0.39
C9orf47-201ENST00000334490 C17orf98A8MV24 154 aa12.62□□□□□ -0.39
C9orf47-201ENST00000334490 CXCL2P19875 107 aa12.62□□□□□ -0.39
C9orf47-201ENST00000334490 CA7P43166 264 aa12.62□□□□□ -0.39
C9orf47-201ENST00000334490 HIST1H3AP68431 136 aa12.62□□□□□ -0.39
C9orf47-201ENST00000334490 ZNF672Q499Z4 452 aaPredicted RBP12.62□□□□□ -0.39
C9orf47-201ENST00000334490 ZNF436-AS1Q8NC38 126 aaPredicted RBP12.62□□□□□ -0.39
C9orf47-201ENST00000334490 MRPL20Q9BYC9 149 aaKnown RBP12.62□□□□□ -0.39
C9orf47-201ENST00000334490 PHF3Q92576 2039 aaKnown RBP12.62□□□□□ -0.39
C9orf47-201ENST00000334490 ZNF738Q8NE65 137 aa12.62□□□□□ -0.39
C9orf47-201ENST00000334490 PIEZO1Q92508 2521 aa12.62□□□□□ -0.39
C9orf47-201ENST00000334490 PF4P02776 101 aa12.62□□□□□ -0.39
C9orf47-201ENST00000334490 HKR1P10072 659 aa12.62□□□□□ -0.39
C9orf47-201ENST00000334490 PRR30Q53SZ7 412 aaPredicted RBP12.62□□□□□ -0.39
C9orf47-201ENST00000334490 CHAC2Q8WUX2 184 aa12.62□□□□□ -0.39
C9orf47-201ENST00000334490 EEF1AKMT3Q96AZ1 226 aa12.62□□□□□ -0.39
C9orf47-201ENST00000334490 DNAJC4Q9NNZ3 241 aa12.62□□□□□ -0.39
C9orf47-201ENST00000334490 TMEM56-RWDD3S4R434 201 aa12.62□□□□□ -0.39
C9orf47-201ENST00000334490 TMEM8BA6NDV4 472 aa12.61□□□□□ -0.39
C9orf47-201ENST00000334490 OR2T8A6NH00 312 aa12.61□□□□□ -0.39
C9orf47-201ENST00000334490 CGB1A6NKQ9 187 aa12.61□□□□□ -0.39
C9orf47-201ENST00000334490 OR10J6PQ8NGY7 276 aa12.61□□□□□ -0.39
C9orf47-201ENST00000334490 CLDN16Q9Y5I7 305 aa12.61□□□□□ -0.39
C9orf47-201ENST00000334490 PQLC2Q6ZP29 291 aa12.61□□□□□ -0.39
C9orf47-201ENST00000334490 H2BFSP57053 126 aa12.61□□□□□ -0.39
C9orf47-201ENST00000334490 AWAT1Q58HT5 328 aa12.61□□□□□ -0.39
C9orf47-201ENST00000334490 ANGPTL6Q8NI99 470 aa12.61□□□□□ -0.39
C9orf47-201ENST00000334490 TECTAO75443 2155 aa12.61□□□□□ -0.39
C9orf47-201ENST00000334490 C1QTNF9BB2RNN3 333 aa12.6□□□□□ -0.39
C9orf47-201ENST00000334490 CSN3P07498 182 aa12.6□□□□□ -0.39
C9orf47-201ENST00000334490 C1QTNF9P0C862 333 aa12.6□□□□□ -0.39
C9orf47-201ENST00000334490 DPPA3Q6W0C5 159 aa12.6□□□□□ -0.39
C9orf47-201ENST00000334490 OR4B1Q8NGF8 309 aa12.6□□□□□ -0.39
C9orf47-201ENST00000334490 PGPA6NDG6 321 aa12.6□□□□□ -0.39
C9orf47-201ENST00000334490 WDR73Q6P4I2 378 aa12.6□□□□□ -0.39
C9orf47-201ENST00000334490 SMIM8Q96KF7 97 aa12.6□□□□□ -0.39
C9orf47-201ENST00000334490 NIT2Q9NQR4 276 aa12.6□□□□□ -0.39
C9orf47-201ENST00000334490 PLSCR2Q9NRY7 297 aa12.6□□□□□ -0.39
C9orf47-201ENST00000334490 SPG11Q96JI7 2443 aa12.6□□□□□ -0.39
C9orf47-201ENST00000334490 NPPCP23582 126 aa12.6□□□□□ -0.39
C9orf47-201ENST00000334490 DEFA6Q01524 100 aa12.6□□□□□ -0.39
C9orf47-201ENST00000334490 NHLRC2Q8NBF2 726 aa12.6□□□□□ -0.39
C9orf47-201ENST00000334490 IGHV3OR16-13A0A075B7E8 117 aa12.6□□□□□ -0.39
C9orf47-201ENST00000334490 IGHV3-74A0A0B4J1X5 117 aa12.6□□□□□ -0.39
C9orf47-201ENST00000334490 HLA-DRB5Q30154 266 aa12.6□□□□□ -0.39
C9orf47-201ENST00000334490 MRPL54Q6P161 138 aaKnown RBP12.6□□□□□ -0.39
C9orf47-201ENST00000334490 YTHDF2Q9Y5A9 579 aaKnown RBP12.6□□□□□ -0.39
C9orf47-201ENST00000334490 RIGQ13278 110 aa12.59□□□□□ -0.39
C9orf47-201ENST00000334490 OR4A47Q6IF82 309 aa12.59□□□□□ -0.39
C9orf47-201ENST00000334490 NR2C2APQ86WQ0 139 aa12.59□□□□□ -0.39
C9orf47-201ENST00000334490 CLRN3Q8NCR9 226 aa12.59□□□□□ -0.39
C9orf47-201ENST00000334490 CFDP00746 253 aaPredicted RBP12.59□□□□□ -0.39
C9orf47-201ENST00000334490 BCL2P10415 239 aa12.59□□□□□ -0.39
C9orf47-201ENST00000334490 EFNA4P52798 201 aa12.59□□□□□ -0.39
C9orf47-201ENST00000334490 FAM74A3Q4VXF1 159 aa12.59□□□□□ -0.39
C9orf47-201ENST00000334490 PTPRDP23468 1912 aa12.59□□□□□ -0.39
C9orf47-201ENST00000334490 TRAV24A0A0B4J272 114 aa12.59□□□□□ -0.39
C9orf47-201ENST00000334490 J3QRE1 110 aa12.59□□□□□ -0.39
C9orf47-201ENST00000334490 MOSP00540 346 aa12.59□□□□□ -0.39
C9orf47-201ENST00000334490 CA2P00918 260 aa12.59□□□□□ -0.39
C9orf47-201ENST00000334490 DLK1P80370 383 aa12.59□□□□□ -0.39
C9orf47-201ENST00000334490 ZNF474Q6S9Z5 364 aaPredicted RBP12.59□□□□□ -0.39
C9orf47-201ENST00000334490 PIP4P1Q86T03 277 aa12.59□□□□□ -0.39
C9orf47-201ENST00000334490 DTX1Q86Y01 620 aa12.59□□□□□ -0.39
C9orf47-201ENST00000334490 ZGRF1Q86YA3 2104 aa12.59□□□□□ -0.39
C9orf47-201ENST00000334490 GBGT1Q8N5D6 347 aa12.59□□□□□ -0.39
C9orf47-201ENST00000334490 OR2D3Q8NGH3 330 aa12.59□□□□□ -0.39
C9orf47-201ENST00000334490 TMEM133Q9H2Q1 129 aa12.59□□□□□ -0.39
C9orf47-201ENST00000334490 S4R3C0 116 aa12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms