RNA–Protein interactions for RNA: ENST00000324685.10

RNF40-201, Transcript of ring finger protein 40, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RNF40, Length 5,634 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-201ENST00000324685 NPCDR1Q9BY65 106 aa17.9■□□□□ 0.46
RNF40-201ENST00000324685 FOXI3A8MTJ6 420 aaPredicted RBP17.9■□□□□ 0.46
RNF40-201ENST00000324685 H7C1H1 209 aa17.9■□□□□ 0.46
RNF40-201ENST00000324685 PQLC2LA1A4F0 135 aa17.9■□□□□ 0.46
RNF40-201ENST00000324685 B9A039 149 aa17.9■□□□□ 0.46
RNF40-201ENST00000324685 IL36BQ9NZH7 164 aa17.9■□□□□ 0.46
RNF40-201ENST00000324685 LY6EQ16553 131 aa17.9■□□□□ 0.46
RNF40-201ENST00000324685 ZNF436-AS1Q8NC38 126 aaPredicted RBP17.9■□□□□ 0.46
RNF40-201ENST00000324685 SSBP3Q9BWW4 388 aaPredicted RBP17.9■□□□□ 0.46
RNF40-201ENST00000324685 PILRBQ9UKJ0 227 aa17.9■□□□□ 0.46
RNF40-201ENST00000324685 DPRXA6NFQ7 191 aa17.89■□□□□ 0.45
RNF40-201ENST00000324685 RECKO95980 971 aa17.89■□□□□ 0.45
RNF40-201ENST00000324685 MESP2Q0VG99 397 aa17.89■□□□□ 0.45
RNF40-201ENST00000324685 CDCP2Q5VXM1 449 aa17.89■□□□□ 0.45
RNF40-201ENST00000324685 ZIC3O60481 467 aa17.89■□□□□ 0.45
RNF40-201ENST00000324685 STAG3L3P0CL85 134 aa17.89■□□□□ 0.45
RNF40-201ENST00000324685 ATOH7Q8N100 152 aa17.89■□□□□ 0.45
RNF40-201ENST00000324685 RRHO14718 337 aa17.89■□□□□ 0.45
RNF40-201ENST00000324685 TSPAN13O95857 204 aa17.89■□□□□ 0.45
RNF40-201ENST00000324685 FHITP49789 147 aa17.89■□□□□ 0.45
RNF40-201ENST00000324685 MOSP00540 346 aa17.89■□□□□ 0.45
RNF40-201ENST00000324685 PLAURQ03405 335 aa17.89■□□□□ 0.45
RNF40-201ENST00000324685 SGK494Q96LW2 274 aa17.89■□□□□ 0.45
RNF40-201ENST00000324685 TIMP4Q99727 224 aa17.89■□□□□ 0.45
RNF40-201ENST00000324685 FOXH1O75593 365 aa17.88■□□□□ 0.45
RNF40-201ENST00000324685 KLRB1Q12918 225 aa17.88■□□□□ 0.45
RNF40-201ENST00000324685 TM2D1Q9BX74 207 aa17.88■□□□□ 0.45
RNF40-201ENST00000324685 SOX21Q9Y651 276 aaPredicted RBP17.88■□□□□ 0.45
RNF40-201ENST00000324685 SIPA1L3O60292 1781 aaPredicted RBP17.88■□□□□ 0.45
RNF40-201ENST00000324685 IFI27L2Q9H2X8 130 aa17.88■□□□□ 0.45
RNF40-201ENST00000324685 CHODLQ9H9P2 273 aa17.88■□□□□ 0.45
RNF40-201ENST00000324685 CARHSP1Q9Y2V2 147 aaKnown RBP17.88■□□□□ 0.45
RNF40-201ENST00000324685 NPIPB7O75200 414 aa17.88■□□□□ 0.45
RNF40-201ENST00000324685 PEAR1Q5VY43 1037 aaPredicted RBP17.88■□□□□ 0.45
RNF40-201ENST00000324685 OSR1Q8TAX0 266 aaPredicted RBP17.88■□□□□ 0.45
RNF40-201ENST00000324685 TMEM101Q96IK0 257 aa17.88■□□□□ 0.45
RNF40-201ENST00000324685 CBLN1P23435 193 aa17.87■□□□□ 0.45
RNF40-201ENST00000324685 SUMO2P61956 95 aaKnown RBP17.87■□□□□ 0.45
RNF40-201ENST00000324685 NUP37Q8NFH4 326 aa17.87■□□□□ 0.45
RNF40-201ENST00000324685 WDYHV1Q96HA8 205 aa17.87■□□□□ 0.45
RNF40-201ENST00000324685 TMEM160Q9NX00 188 aa17.87■□□□□ 0.45
RNF40-201ENST00000324685 PRELID3AQ96N28 172 aa17.87■□□□□ 0.45
RNF40-201ENST00000324685 GP6Q9HCN6 339 aa17.87■□□□□ 0.45
RNF40-201ENST00000324685 EFNB1P98172 346 aa17.87■□□□□ 0.45
RNF40-201ENST00000324685 ACSF3Q4G176 576 aaPredicted RBP17.87■□□□□ 0.45
RNF40-201ENST00000324685 Q5BKY6 102 aa17.87■□□□□ 0.45
RNF40-201ENST00000324685 WFIKKN1Q96NZ8 548 aa17.87■□□□□ 0.45
RNF40-201ENST00000324685 GREM1O60565 184 aa17.87■□□□□ 0.45
RNF40-201ENST00000324685 ASIPP42127 132 aa17.87■□□□□ 0.45
RNF40-201ENST00000324685 NEUROG1Q92886 237 aa17.87■□□□□ 0.45
RNF40-201ENST00000324685 FAM131CQ96AQ9 280 aa17.87■□□□□ 0.45
RNF40-201ENST00000324685 FMC1Q96HJ9 113 aa17.87■□□□□ 0.45
RNF40-201ENST00000324685 RCC1LQ96I51 464 aaKnown RBP17.87■□□□□ 0.45
RNF40-201ENST00000324685 A0A1B0GW15 77 aa17.87■□□□□ 0.45
RNF40-201ENST00000324685 CEACAM4O75871 244 aa17.87■□□□□ 0.45
RNF40-201ENST00000324685 STARD6P59095 220 aa17.87■□□□□ 0.45
RNF40-201ENST00000324685 TCF23Q7RTU1 214 aa17.87■□□□□ 0.45
RNF40-201ENST00000324685 DCTN5Q9BTE1 182 aa17.87■□□□□ 0.45
RNF40-201ENST00000324685 C1QTNF9BB2RNN3 333 aa17.86■□□□□ 0.45
RNF40-201ENST00000324685 OR13C6PQ8NH95 151 aa17.86■□□□□ 0.45
RNF40-201ENST00000324685 SCARF2Q96GP6 870 aaPredicted RBP17.86■□□□□ 0.45
RNF40-201ENST00000324685 BEX4Q9NWD9 120 aaPredicted RBP17.86■□□□□ 0.45
RNF40-201ENST00000324685 TRAV9-1A0A075B6T8 112 aa17.86■□□□□ 0.45
RNF40-201ENST00000324685 TM4SF5O14894 197 aa17.86■□□□□ 0.45
RNF40-201ENST00000324685 ATP5LO75964 103 aa17.86■□□□□ 0.45
RNF40-201ENST00000324685 CRYBA2P53672 197 aa17.86■□□□□ 0.45
RNF40-201ENST00000324685 KLF4O43474 513 aa17.86■□□□□ 0.45
RNF40-201ENST00000324685 EGR4Q05215 589 aa17.86■□□□□ 0.45
RNF40-201ENST00000324685 ICAM4Q14773 271 aa17.86■□□□□ 0.45
RNF40-201ENST00000324685 PSMG4Q5JS54 123 aa17.86■□□□□ 0.45
RNF40-201ENST00000324685 ACP7Q6ZNF0 438 aa17.86■□□□□ 0.45
RNF40-201ENST00000324685 TEX45Q8NA69 505 aa17.86■□□□□ 0.45
RNF40-201ENST00000324685 RPL39P5Q59GN2 51 aa17.85■□□□□ 0.45
RNF40-201ENST00000324685 Q6ZT83 130 aa17.85■□□□□ 0.45
RNF40-201ENST00000324685 TRIP11Q15643 1979 aa17.85■□□□□ 0.45
RNF40-201ENST00000324685 TBR1Q16650 682 aa17.85■□□□□ 0.45
RNF40-201ENST00000324685 TTC9CQ8N5M4 171 aa17.85■□□□□ 0.45
RNF40-201ENST00000324685 CENPVQ7Z7K6 275 aaPredicted RBP17.85■□□□□ 0.45
RNF40-201ENST00000324685 MRPL16Q9NX20 251 aaKnown RBP17.85■□□□□ 0.45
RNF40-201ENST00000324685 TMEM170BQ5T4T1 132 aa17.85■□□□□ 0.45
RNF40-201ENST00000324685 IGKV3OR2-268A0A0C4DH90 116 aa17.84■□□□□ 0.45
RNF40-201ENST00000324685 LRTM2Q8N967 370 aa17.84■□□□□ 0.45
RNF40-201ENST00000324685 ATP5J2P56134 94 aa17.84■□□□□ 0.45
RNF40-201ENST00000324685 TNFRSF18Q9Y5U5 241 aa17.84■□□□□ 0.45
RNF40-201ENST00000324685 RPRMQ9NS64 109 aa17.84■□□□□ 0.45
RNF40-201ENST00000324685 FOXD3Q9UJU5 478 aaPredicted RBP17.84■□□□□ 0.45
RNF40-201ENST00000324685 TRPM6Q9BX84 2022 aa17.84■□□□□ 0.45
RNF40-201ENST00000324685 NBEAP1P0C6P0 100 aa17.84■□□□□ 0.45
RNF40-201ENST00000324685 CTAG1AP78358 180 aa17.84■□□□□ 0.45
RNF40-201ENST00000324685 C10orf126Q8N4M7 172 aa17.84■□□□□ 0.45
RNF40-201ENST00000324685 DNASE2BQ8WZ79 361 aa17.84■□□□□ 0.45
RNF40-201ENST00000324685 SPOCK3Q9BQ16 436 aa17.84■□□□□ 0.45
RNF40-201ENST00000324685 C2orf88Q9BSF0 95 aa17.84■□□□□ 0.45
RNF40-201ENST00000324685 PEX7O00628 323 aa17.83■□□□□ 0.45
RNF40-201ENST00000324685 RTN4RL2Q86UN3 420 aa17.83■□□□□ 0.45
RNF40-201ENST00000324685 KCNS1Q96KK3 526 aa17.83■□□□□ 0.45
RNF40-201ENST00000324685 CCL19Q99731 98 aa17.83■□□□□ 0.45
RNF40-201ENST00000324685 JKAMPQ9P055 326 aa17.83■□□□□ 0.45
RNF40-201ENST00000324685 Q6AWC8 147 aa17.83■□□□□ 0.44
RNF40-201ENST00000324685 TRAV8-6A0A0B4J262 113 aa17.83■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 10.3 ms