RNA–Protein interactions for RNA: ENST00000321728.11

PRKCB-202, Transcript of protein kinase C beta, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PRKCB, Length 2,689 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCB-202ENST00000321728 Q6ZN92 141 aa14.9□□□□□ -0.02
PRKCB-202ENST00000321728 C1orf174Q8IYL3 243 aa14.9□□□□□ -0.02
PRKCB-202ENST00000321728 STPG4Q8N801 248 aa14.9□□□□□ -0.02
PRKCB-202ENST00000321728 MGST2Q99735 147 aa14.9□□□□□ -0.02
PRKCB-202ENST00000321728 NRN1Q9NPD7 142 aa14.9□□□□□ -0.02
PRKCB-202ENST00000321728 KMT2EQ8IZD2 1858 aa14.9□□□□□ -0.02
PRKCB-202ENST00000321728 IGHV3-43A0A0B4J1X8 118 aa14.89□□□□□ -0.03
PRKCB-202ENST00000321728 MPDU1O75352 247 aa14.89□□□□□ -0.03
PRKCB-202ENST00000321728 HAND1O96004 215 aa14.89□□□□□ -0.03
PRKCB-202ENST00000321728 IGHV3-43DP0DP04 118 aa14.89□□□□□ -0.03
PRKCB-202ENST00000321728 CYB561P49447 251 aa14.89□□□□□ -0.03
PRKCB-202ENST00000321728 Q0VFX4 171 aa14.89□□□□□ -0.03
PRKCB-202ENST00000321728 ZNF146Q15072 292 aa14.89□□□□□ -0.03
PRKCB-202ENST00000321728 KIAA1644Q3SXP7 199 aa14.89□□□□□ -0.03
PRKCB-202ENST00000321728 ST6GALNAC3Q8NDV1 305 aa14.89□□□□□ -0.03
PRKCB-202ENST00000321728 HEYLQ9NQ87 328 aaPredicted RBP14.89□□□□□ -0.03
PRKCB-202ENST00000321728 NCOR1O75376 2440 aa14.89□□□□□ -0.03
PRKCB-202ENST00000321728 C20orf202A1L168 122 aa14.89□□□□□ -0.03
PRKCB-202ENST00000321728 CELA3AP09093 270 aa14.89□□□□□ -0.03
PRKCB-202ENST00000321728 SPINK14Q6IE38 97 aa14.89□□□□□ -0.03
PRKCB-202ENST00000321728 Q8N976 141 aa14.89□□□□□ -0.03
PRKCB-202ENST00000321728 MRGPRDQ8TDS7 321 aa14.89□□□□□ -0.03
PRKCB-202ENST00000321728 MS4A5Q9H3V2 200 aa14.89□□□□□ -0.03
PRKCB-202ENST00000321728 ZNF703Q9H7S9 590 aaPredicted RBP14.89□□□□□ -0.03
PRKCB-202ENST00000321728 ASCL3Q9NQ33 180 aa14.89□□□□□ -0.03
PRKCB-202ENST00000321728 TUBG2Q9NRH3 451 aa14.89□□□□□ -0.03
PRKCB-202ENST00000321728 UQCR10Q9UDW1 63 aa14.89□□□□□ -0.03
PRKCB-202ENST00000321728 SLC45A2Q9UMX9 530 aa14.89□□□□□ -0.03
PRKCB-202ENST00000321728 TRAV34A0A0B4J273 112 aa14.89□□□□□ -0.03
PRKCB-202ENST00000321728 DEFB108AA8MXU0 73 aa14.89□□□□□ -0.03
PRKCB-202ENST00000321728 OR5G3P0C626 314 aa14.89□□□□□ -0.03
PRKCB-202ENST00000321728 OR9G9P0C7N8 305 aa14.89□□□□□ -0.03
PRKCB-202ENST00000321728 ZNF718Q3SXZ3 478 aa14.89□□□□□ -0.03
PRKCB-202ENST00000321728 FBXW9Q5XUX1 488 aa14.89□□□□□ -0.03
PRKCB-202ENST00000321728 UHRF2Q96PU4 802 aa14.89□□□□□ -0.03
PRKCB-202ENST00000321728 GGTLC1Q9BX51 225 aa14.89□□□□□ -0.03
PRKCB-202ENST00000321728 GCHFRP30047 84 aa14.88□□□□□ -0.03
PRKCB-202ENST00000321728 GABRA2P47869 451 aa14.88□□□□□ -0.03
PRKCB-202ENST00000321728 GNG10P50151 68 aa14.88□□□□□ -0.03
PRKCB-202ENST00000321728 HNRNPA3P51991 378 aaKnown RBP14.88□□□□□ -0.03
PRKCB-202ENST00000321728 SLC35B1P78383 322 aa14.88□□□□□ -0.03
PRKCB-202ENST00000321728 EAF1Q96JC9 268 aaPredicted RBP14.88□□□□□ -0.03
PRKCB-202ENST00000321728 GNB1LQ9BYB4 327 aa14.88□□□□□ -0.03
PRKCB-202ENST00000321728 OOEPA6NGQ2 149 aa14.88□□□□□ -0.03
PRKCB-202ENST00000321728 COL8A2P25067 703 aa14.88□□□□□ -0.03
PRKCB-202ENST00000321728 CTRLP40313 264 aa14.88□□□□□ -0.03
PRKCB-202ENST00000321728 C3AR1Q16581 482 aa14.88□□□□□ -0.03
PRKCB-202ENST00000321728 RFESDQ8TAC1 157 aa14.88□□□□□ -0.03
PRKCB-202ENST00000321728 HES7Q9BYE0 225 aa14.88□□□□□ -0.03
PRKCB-202ENST00000321728 PSG11Q9UQ72 335 aa14.88□□□□□ -0.03
PRKCB-202ENST00000321728 RPP30P78346 268 aaKnown RBP14.87□□□□□ -0.03
PRKCB-202ENST00000321728 SPATA31B1PQ5VZV4 182 aa14.87□□□□□ -0.03
PRKCB-202ENST00000321728 SEPSECSQ9HD40 501 aaKnown RBP14.87□□□□□ -0.03
PRKCB-202ENST00000321728 TRBV9A0A0B4J1U6 114 aa14.87□□□□□ -0.03
PRKCB-202ENST00000321728 ZNF253O75346 499 aa14.87□□□□□ -0.03
PRKCB-202ENST00000321728 HYPMO75409 117 aa14.87□□□□□ -0.03
PRKCB-202ENST00000321728 HOXA4Q00056 320 aaPredicted RBP14.87□□□□□ -0.03
PRKCB-202ENST00000321728 PRAMEF5Q5TYX0 476 aa14.87□□□□□ -0.03
PRKCB-202ENST00000321728 PRAMEF6Q5VXH4 476 aa14.87□□□□□ -0.03
PRKCB-202ENST00000321728 RCHY1Q96PM5 261 aa14.87□□□□□ -0.03
PRKCB-202ENST00000321728 LAMTOR2Q9Y2Q5 125 aa14.87□□□□□ -0.03
PRKCB-202ENST00000321728 GPR179Q6PRD1 2367 aa14.86□□□□□ -0.03
PRKCB-202ENST00000321728 YLPM1P49750 1951 aaKnown RBP14.86□□□□□ -0.03
PRKCB-202ENST00000321728 NDUFB8O95169 186 aa14.86□□□□□ -0.03
PRKCB-202ENST00000321728 TDGF1P13385 188 aa14.86□□□□□ -0.03
PRKCB-202ENST00000321728 PTTG1IPP53801 180 aa14.86□□□□□ -0.03
PRKCB-202ENST00000321728 TPRX1Q8N7U7 411 aa14.86□□□□□ -0.03
PRKCB-202ENST00000321728 OR4A16Q8NH70 328 aa14.86□□□□□ -0.03
PRKCB-202ENST00000321728 KCNS1Q96KK3 526 aa14.86□□□□□ -0.03
PRKCB-202ENST00000321728 SFXN3Q9BWM7 321 aa14.86□□□□□ -0.03
PRKCB-202ENST00000321728 WNT10AQ9GZT5 417 aa14.86□□□□□ -0.03
PRKCB-202ENST00000321728 C12orf49Q9H741 205 aa14.86□□□□□ -0.03
PRKCB-202ENST00000321728 BOKQ9UMX3 212 aaPredicted RBP14.86□□□□□ -0.03
PRKCB-202ENST00000321728 V9GYV3 84 aa14.86□□□□□ -0.03
PRKCB-202ENST00000321728 KNTC1P50748 2209 aa14.86□□□□□ -0.03
PRKCB-202ENST00000321728 TNRC18O15417 2968 aaPredicted RBP14.86□□□□□ -0.03
PRKCB-202ENST00000321728 FOXH1O75593 365 aa14.86□□□□□ -0.03
PRKCB-202ENST00000321728 TFF1P04155 84 aa14.86□□□□□ -0.03
PRKCB-202ENST00000321728 IGLC2P0DOY2 106 aa14.86□□□□□ -0.03
PRKCB-202ENST00000321728 IGLC3P0DOY3 106 aa14.86□□□□□ -0.03
PRKCB-202ENST00000321728 SSTR5P35346 364 aa14.86□□□□□ -0.03
PRKCB-202ENST00000321728 TCL1AP56279 114 aa14.86□□□□□ -0.03
PRKCB-202ENST00000321728 OR1C1Q15619 314 aa14.86□□□□□ -0.03
PRKCB-202ENST00000321728 LTC4SQ16873 150 aa14.86□□□□□ -0.03
PRKCB-202ENST00000321728 DCAF12Q5T6F0 453 aa14.86□□□□□ -0.03
PRKCB-202ENST00000321728 CXorf67Q86X51 503 aaPredicted RBP14.86□□□□□ -0.03
PRKCB-202ENST00000321728 TCTEX1D1Q8N7M0 179 aa14.86□□□□□ -0.03
PRKCB-202ENST00000321728 MAFAQ8NHW3 353 aaPredicted RBP14.86□□□□□ -0.03
PRKCB-202ENST00000321728 HSD17B10Q99714 261 aaKnown RBP14.86□□□□□ -0.03
PRKCB-202ENST00000321728 PRR14LQ5THK1 2151 aa14.86□□□□□ -0.03
PRKCB-202ENST00000321728 A0A1W2PS18 150 aa14.85□□□□□ -0.03
PRKCB-202ENST00000321728 C9JCJ5 164 aa14.85□□□□□ -0.03
PRKCB-202ENST00000321728 FCGR3BO75015 233 aa14.85□□□□□ -0.03
PRKCB-202ENST00000321728 CLDN18P56856 261 aa14.85□□□□□ -0.03
PRKCB-202ENST00000321728 RPL19P84098 196 aaKnown RBP14.85□□□□□ -0.03
PRKCB-202ENST00000321728 PPP1R32Q7Z5V6 425 aa14.85□□□□□ -0.03
PRKCB-202ENST00000321728 MDP1Q86V88 176 aa14.85□□□□□ -0.03
PRKCB-202ENST00000321728 ABHD12Q8N2K0 398 aa14.85□□□□□ -0.03
PRKCB-202ENST00000321728 FAM234AQ9H0X4 552 aa14.85□□□□□ -0.03
PRKCB-202ENST00000321728 WNT9BO14905 357 aa14.85□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms