RNA–Protein interactions for RNA: ENST00000317173.8

MSRA-201, Transcript of methionine sulfoxide reductase A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSRA, Length 1,536 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSRA-201ENST00000317173 AARDQ4LEZ3 155 aa11.31□□□□□ -0.6
MSRA-201ENST00000317173 KLF17Q5JT82 389 aaPredicted RBP11.31□□□□□ -0.6
MSRA-201ENST00000317173 OR4A47Q6IF82 309 aa11.31□□□□□ -0.6
MSRA-201ENST00000317173 Q6ZRM9 215 aa11.31□□□□□ -0.6
MSRA-201ENST00000317173 NOXA1Q86UR1 476 aa11.31□□□□□ -0.6
MSRA-201ENST00000317173 THNSL2Q86YJ6 484 aa11.31□□□□□ -0.6
MSRA-201ENST00000317173 FOXRED2Q8IWF2 684 aa11.31□□□□□ -0.6
MSRA-201ENST00000317173 PUSL1Q8N0Z8 303 aaKnown RBP11.31□□□□□ -0.6
MSRA-201ENST00000317173 NANPQ8TBE9 248 aa11.31□□□□□ -0.6
MSRA-201ENST00000317173 WDR89Q96FK6 387 aaPredicted RBP11.31□□□□□ -0.6
MSRA-201ENST00000317173 MEGF9Q9H1U4 602 aa11.31□□□□□ -0.6
MSRA-201ENST00000317173 IGHV3-72A0A0B4J1Y9 119 aa11.3□□□□□ -0.6
MSRA-201ENST00000317173 MOSP00540 346 aa11.3□□□□□ -0.6
MSRA-201ENST00000317173 RLN2P04090 185 aa11.3□□□□□ -0.6
MSRA-201ENST00000317173 SLC25A4P12235 298 aa11.3□□□□□ -0.6
MSRA-201ENST00000317173 RAB32Q13637 225 aa11.3□□□□□ -0.6
MSRA-201ENST00000317173 RUSC1-AS1Q66K80 236 aa11.3□□□□□ -0.6
MSRA-201ENST00000317173 C11orf87Q6NUJ2 197 aa11.3□□□□□ -0.6
MSRA-201ENST00000317173 ZNF429Q86V71 674 aa11.3□□□□□ -0.6
MSRA-201ENST00000317173 DYNAPQ8N1N2 210 aa11.3□□□□□ -0.6
MSRA-201ENST00000317173 TEX45Q8NA69 505 aa11.3□□□□□ -0.6
MSRA-201ENST00000317173 OR2T10Q8NGZ9 312 aa11.3□□□□□ -0.6
MSRA-201ENST00000317173 THAP6Q8TBB0 222 aa11.3□□□□□ -0.6
MSRA-201ENST00000317173 POMT1Q9Y6A1 747 aa11.3□□□□□ -0.6
MSRA-201ENST00000317173 TRAV14DV4A0A0A6YYC5 116 aa11.3□□□□□ -0.6
MSRA-201ENST00000317173 SRRM4A7MD48 611 aaKnown RBP11.3□□□□□ -0.6
MSRA-201ENST00000317173 MBPP02686 304 aaPredicted RBP11.3□□□□□ -0.6
MSRA-201ENST00000317173 FBP1P09467 338 aa11.3□□□□□ -0.6
MSRA-201ENST00000317173 FAM106CPP0CH98 169 aa11.3□□□□□ -0.6
MSRA-201ENST00000317173 SAA1P0DJI8 122 aaPredicted RBP11.3□□□□□ -0.6
MSRA-201ENST00000317173 LYL1P12980 280 aa11.3□□□□□ -0.6
MSRA-201ENST00000317173 AANATQ16613 207 aa11.3□□□□□ -0.6
MSRA-201ENST00000317173 LRRC37A5PQ49AS3 106 aa11.3□□□□□ -0.6
MSRA-201ENST00000317173 PRSS54Q6PEW0 395 aa11.3□□□□□ -0.6
MSRA-201ENST00000317173 C9orf139Q6ZV77 190 aa11.3□□□□□ -0.6
MSRA-201ENST00000317173 SSX9Q7RTT3 188 aa11.3□□□□□ -0.6
MSRA-201ENST00000317173 VKORC1L1Q8N0U8 176 aa11.3□□□□□ -0.6
MSRA-201ENST00000317173 OR52E5Q8NH55 327 aa11.3□□□□□ -0.6
MSRA-201ENST00000317173 OR4A16Q8NH70 328 aa11.3□□□□□ -0.6
MSRA-201ENST00000317173 C17orf50Q8WW18 174 aa11.3□□□□□ -0.6
MSRA-201ENST00000317173 FKBP11Q9NYL4 201 aa11.3□□□□□ -0.6
MSRA-201ENST00000317173 NUP50Q9UKX7 468 aa11.3□□□□□ -0.6
MSRA-201ENST00000317173 PRNDQ9UKY0 176 aa11.3□□□□□ -0.6
MSRA-201ENST00000317173 FAM96BQ9Y3D0 163 aa11.3□□□□□ -0.6
MSRA-201ENST00000317173 C15orf61A6NNL5 157 aa11.29□□□□□ -0.6
MSRA-201ENST00000317173 HMSDA8MTL9 139 aa11.29□□□□□ -0.6
MSRA-201ENST00000317173 SMLR1H3BR10 107 aa11.29□□□□□ -0.6
MSRA-201ENST00000317173 BOLA2-SMG1P6H3BVE0 249 aa11.29□□□□□ -0.6
MSRA-201ENST00000317173 K7EPK0 472 aa11.29□□□□□ -0.6
MSRA-201ENST00000317173 UPK2O00526 184 aa11.29□□□□□ -0.6
MSRA-201ENST00000317173 MED6O75586 246 aa11.29□□□□□ -0.6
MSRA-201ENST00000317173 KBTBD11O94819 623 aa11.29□□□□□ -0.6
MSRA-201ENST00000317173 LY86O95711 162 aa11.29□□□□□ -0.6
MSRA-201ENST00000317173 SCGB1D2O95969 90 aa11.29□□□□□ -0.6
MSRA-201ENST00000317173 IGKV1D-33P01593 117 aa11.29□□□□□ -0.6
MSRA-201ENST00000317173 IGKV1-33P01594 117 aa11.29□□□□□ -0.6
MSRA-201ENST00000317173 IGLV2-23P01705 113 aa11.29□□□□□ -0.6
MSRA-201ENST00000317173 OR9G9P0C7N8 305 aa11.29□□□□□ -0.6
MSRA-201ENST00000317173 SRP14P37108 136 aaKnown RBP11.29□□□□□ -0.6
MSRA-201ENST00000317173 S100A10P60903 97 aa11.29□□□□□ -0.6
MSRA-201ENST00000317173 RELBQ01201 579 aa11.29□□□□□ -0.6
MSRA-201ENST00000317173 IZUMO4Q1ZYL8 232 aa11.29□□□□□ -0.6
MSRA-201ENST00000317173 PDLIM3Q53GG5 364 aaPredicted RBP11.29□□□□□ -0.6
MSRA-201ENST00000317173 Q5BKY6 102 aa11.29□□□□□ -0.6
MSRA-201ENST00000317173 TMEM65Q6PI78 240 aa11.29□□□□□ -0.6
MSRA-201ENST00000317173 BRD3OSQ6XYD6 125 aa11.29□□□□□ -0.6
MSRA-201ENST00000317173 IL17RELQ6ZVW7 336 aa11.29□□□□□ -0.6
MSRA-201ENST00000317173 FAM71E2Q8N5Q1 922 aa11.29□□□□□ -0.6
MSRA-201ENST00000317173 OR8H1Q8NGG4 311 aa11.29□□□□□ -0.6
MSRA-201ENST00000317173 TMEM167AQ8TBQ9 72 aa11.29□□□□□ -0.6
MSRA-201ENST00000317173 EAF1Q96JC9 268 aaPredicted RBP11.29□□□□□ -0.6
MSRA-201ENST00000317173 HSPB7Q9UBY9 170 aa11.29□□□□□ -0.6
MSRA-201ENST00000317173 FOXA2Q9Y261 457 aaPredicted RBP11.29□□□□□ -0.6
MSRA-201ENST00000317173 ATRQ13535 2644 aa11.28□□□□□ -0.6
MSRA-201ENST00000317173 IGHV3OR16-10A0A075B7F0 116 aa11.28□□□□□ -0.6
MSRA-201ENST00000317173 A0A0U1RQK1 487 aa11.28□□□□□ -0.6
MSRA-201ENST00000317173 WRBO00258 174 aa11.28□□□□□ -0.6
MSRA-201ENST00000317173 RBMXL2O75526 392 aaKnown RBP11.28□□□□□ -0.6
MSRA-201ENST00000317173 DEDDO75618 318 aa11.28□□□□□ -0.6
MSRA-201ENST00000317173 SNRNP70P08621 437 aaKnown RBP11.28□□□□□ -0.6
MSRA-201ENST00000317173 PVALBP20472 110 aaPredicted RBP11.28□□□□□ -0.6
MSRA-201ENST00000317173 EIF2B2P49770 351 aaKnown RBP11.28□□□□□ -0.6
MSRA-201ENST00000317173 CXorf66Q5JRM2 361 aaPredicted RBP11.28□□□□□ -0.6
MSRA-201ENST00000317173 Q8N6K4 173 aa11.28□□□□□ -0.6
MSRA-201ENST00000317173 NPBQ8NG41 125 aa11.28□□□□□ -0.6
MSRA-201ENST00000317173 TMEM14BQ9NUH8 114 aa11.28□□□□□ -0.6
MSRA-201ENST00000317173 ZNF257Q9Y2Q1 563 aa11.28□□□□□ -0.6
MSRA-201ENST00000317173 E5RGE8 158 aa11.27□□□□□ -0.61
MSRA-201ENST00000317173 NDUFA3O95167 84 aa11.27□□□□□ -0.61
MSRA-201ENST00000317173 CRYGBP07316 175 aa11.27□□□□□ -0.61
MSRA-201ENST00000317173 TNFRSF9Q07011 255 aa11.27□□□□□ -0.61
MSRA-201ENST00000317173 SCGB2A2Q13296 93 aa11.27□□□□□ -0.61
MSRA-201ENST00000317173 HES1Q14469 280 aa11.27□□□□□ -0.61
MSRA-201ENST00000317173 PSG5Q15238 335 aa11.27□□□□□ -0.61
MSRA-201ENST00000317173 OR11H4Q8NGC9 324 aa11.27□□□□□ -0.61
MSRA-201ENST00000317173 OR5B3Q8NH48 314 aa11.27□□□□□ -0.61
MSRA-201ENST00000317173 RAB40CQ96S21 281 aa11.27□□□□□ -0.61
MSRA-201ENST00000317173 RNF126Q9BV68 326 aa11.27□□□□□ -0.61
MSRA-201ENST00000317173 C1RLQ9NZP8 487 aa11.27□□□□□ -0.61
MSRA-201ENST00000317173 KIAA1456Q9P272 454 aa11.27□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms