RNA–Protein interactions for RNA: ENST00000315491.11

TUBB3-201, Transcript of tubulin beta 3 class III, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TUBB3, Length 1,769 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-201ENST00000315491 CT45A5P0DMU8 189 aa13.06□□□□□ -0.32
TUBB3-201ENST00000315491 CT45A7P0DMV0 189 aa13.06□□□□□ -0.32
TUBB3-201ENST00000315491 CEACAM3P40198 252 aa13.06□□□□□ -0.32
TUBB3-201ENST00000315491 AKR1C2P52895 323 aa13.06□□□□□ -0.32
TUBB3-201ENST00000315491 AKR1C1Q04828 323 aa13.06□□□□□ -0.32
TUBB3-201ENST00000315491 TMEM187Q14656 261 aa13.06□□□□□ -0.32
TUBB3-201ENST00000315491 TPTE2P1Q5T6R2 138 aa13.06□□□□□ -0.32
TUBB3-201ENST00000315491 LHFPL4Q7Z7J7 247 aa13.06□□□□□ -0.32
TUBB3-201ENST00000315491 ZNF383Q8NA42 475 aa13.06□□□□□ -0.32
TUBB3-201ENST00000315491 INO80EQ8NBZ0 244 aaPredicted RBP13.06□□□□□ -0.32
TUBB3-201ENST00000315491 IGHV3OR16-10A0A075B7F0 116 aa13.05□□□□□ -0.32
TUBB3-201ENST00000315491 IGHV1-69DA0A0B4J2H0 117 aa13.05□□□□□ -0.32
TUBB3-201ENST00000315491 NPFFO15130 113 aa13.05□□□□□ -0.32
TUBB3-201ENST00000315491 IGHV1-69P01742 117 aa13.05□□□□□ -0.32
TUBB3-201ENST00000315491 GAPDHP04406 335 aaKnown RBP13.05□□□□□ -0.32
TUBB3-201ENST00000315491 UCP1P25874 307 aa13.05□□□□□ -0.32
TUBB3-201ENST00000315491 ANKRD55Q3KP44 614 aa13.05□□□□□ -0.32
TUBB3-201ENST00000315491 MIDNQ504T8 468 aa13.05□□□□□ -0.32
TUBB3-201ENST00000315491 OR2B11Q5JQS5 317 aa13.05□□□□□ -0.32
TUBB3-201ENST00000315491 GPR157Q5UAW9 335 aa13.05□□□□□ -0.32
TUBB3-201ENST00000315491 LIAT1Q6ZQX7 453 aa13.05□□□□□ -0.32
TUBB3-201ENST00000315491 DDB2Q92466 427 aa13.05□□□□□ -0.32
TUBB3-201ENST00000315491 SAT2Q96F10 170 aaPredicted RBP13.05□□□□□ -0.32
TUBB3-201ENST00000315491 PHB2Q99623 299 aa13.05□□□□□ -0.32
TUBB3-201ENST00000315491 NABP2Q9BQ15 211 aa13.05□□□□□ -0.32
TUBB3-201ENST00000315491 A0A0B4J2A0 478 aa13.04□□□□□ -0.32
TUBB3-201ENST00000315491 TXNL1O43396 289 aa13.04□□□□□ -0.32
TUBB3-201ENST00000315491 IGHV4-38-2P0DP08 117 aa13.04□□□□□ -0.32
TUBB3-201ENST00000315491 EPHA1P21709 976 aa13.04□□□□□ -0.32
TUBB3-201ENST00000315491 SRSF3P84103 164 aaKnown RBP13.04□□□□□ -0.32
TUBB3-201ENST00000315491 ZNF816Q0VGE8 651 aaPredicted RBP13.04□□□□□ -0.32
TUBB3-201ENST00000315491 TCTEX1D1Q8N7M0 179 aa13.04□□□□□ -0.32
TUBB3-201ENST00000315491 PPP1R1CQ8WVI7 109 aa13.04□□□□□ -0.32
TUBB3-201ENST00000315491 TMEM222Q9H0R3 208 aa13.04□□□□□ -0.32
TUBB3-201ENST00000315491 SHPKQ9UHJ6 478 aa13.04□□□□□ -0.32
TUBB3-201ENST00000315491 WNK2Q9Y3S1 2297 aa13.04□□□□□ -0.32
TUBB3-201ENST00000315491 AKAP9Q99996 3911 aa13.04□□□□□ -0.32
TUBB3-201ENST00000315491 ASH1LQ9NR48 2969 aaKnown RBP13.04□□□□□ -0.32
TUBB3-201ENST00000315491 SAA4P35542 130 aa13.04□□□□□ -0.32
TUBB3-201ENST00000315491 KIR2DS2P43631 304 aa13.04□□□□□ -0.32
TUBB3-201ENST00000315491 BRWD1-AS2P59051 145 aa13.04□□□□□ -0.32
TUBB3-201ENST00000315491 KLF17Q5JT82 389 aaPredicted RBP13.04□□□□□ -0.32
TUBB3-201ENST00000315491 RUSC1-AS1Q66K80 236 aa13.04□□□□□ -0.32
TUBB3-201ENST00000315491 BAP18Q8IXM2 172 aa13.04□□□□□ -0.32
TUBB3-201ENST00000315491 PIP4P2Q8N4L2 257 aa13.04□□□□□ -0.32
TUBB3-201ENST00000315491 FAM212BQ9NTI7 297 aaPredicted RBP13.04□□□□□ -0.32
TUBB3-201ENST00000315491 HILPDAQ9Y5L2 63 aa13.04□□□□□ -0.32
TUBB3-201ENST00000315491 DMRT1Q9Y5R6 373 aa13.04□□□□□ -0.32
TUBB3-201ENST00000315491 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP13.03□□□□□ -0.322e-8■■□□□ 12
TUBB3-201ENST00000315491 IGHV1-3A0A0C4DH29 117 aa13.03□□□□□ -0.32
TUBB3-201ENST00000315491 FCGR3BO75015 233 aa13.03□□□□□ -0.32
TUBB3-201ENST00000315491 SERPINE2P07093 398 aa13.03□□□□□ -0.32
TUBB3-201ENST00000315491 FAM157CP0CG43 387 aa13.03□□□□□ -0.32
TUBB3-201ENST00000315491 SRPXP78539 464 aa13.03□□□□□ -0.32
TUBB3-201ENST00000315491 ZNF585BQ52M93 769 aa13.03□□□□□ -0.32
TUBB3-201ENST00000315491 LGI3Q8N145 548 aa13.03□□□□□ -0.32
TUBB3-201ENST00000315491 OR5AN1Q8NGI8 311 aa13.03□□□□□ -0.32
TUBB3-201ENST00000315491 CD300LFQ8TDQ1 290 aa13.03□□□□□ -0.32
TUBB3-201ENST00000315491 HIST1H2BAQ96A08 127 aa13.03□□□□□ -0.32
TUBB3-201ENST00000315491 TMEM56Q96MV1 263 aa13.03□□□□□ -0.32
TUBB3-201ENST00000315491 TUBA4BQ9H853 241 aa13.03□□□□□ -0.32
TUBB3-201ENST00000315491 POMT1Q9Y6A1 747 aa13.03□□□□□ -0.32
TUBB3-201ENST00000315491 TMEM56-RWDD3S4R434 201 aa13.03□□□□□ -0.32
TUBB3-201ENST00000315491 BAHCC1Q9P281 2608 aa13.02□□□□□ -0.32
TUBB3-201ENST00000315491 OOSP1A8MZH6 123 aa13.02□□□□□ -0.32
TUBB3-201ENST00000315491 H0YJW9 148 aa13.02□□□□□ -0.32
TUBB3-201ENST00000315491 CD5LO43866 347 aa13.02□□□□□ -0.32
TUBB3-201ENST00000315491 RAMP3O60896 148 aa13.02□□□□□ -0.32
TUBB3-201ENST00000315491 CDS2O95674 445 aa13.02□□□□□ -0.32
TUBB3-201ENST00000315491 APOA2P02652 100 aa13.02□□□□□ -0.32
TUBB3-201ENST00000315491 MT-ND4LP03901 98 aa13.02□□□□□ -0.32
TUBB3-201ENST00000315491 LPAR6P43657 344 aa13.02□□□□□ -0.32
TUBB3-201ENST00000315491 CAV2P51636 162 aa13.02□□□□□ -0.32
TUBB3-201ENST00000315491 KRTAP1-1Q07627 177 aa13.02□□□□□ -0.32
TUBB3-201ENST00000315491 SSX2Q16385 188 aa13.02□□□□□ -0.32
TUBB3-201ENST00000315491 MOB3BQ86TA1 216 aa13.02□□□□□ -0.32
TUBB3-201ENST00000315491 ZNF695Q8IW36 515 aa13.02□□□□□ -0.32
TUBB3-201ENST00000315491 LRTM2Q8N967 370 aa13.02□□□□□ -0.32
TUBB3-201ENST00000315491 MALSU1Q96EH3 234 aa13.02□□□□□ -0.32
TUBB3-201ENST00000315491 C18orf12Q96KH6 178 aa13.02□□□□□ -0.32
TUBB3-201ENST00000315491 SLC35D1Q9NTN3 355 aa13.02□□□□□ -0.32
TUBB3-201ENST00000315491 A0A1W2PPI3 338 aa13.02□□□□□ -0.33
TUBB3-201ENST00000315491 RBFOX2O43251 390 aaKnown RBP eCLIP13.02□□□□□ -0.33
TUBB3-201ENST00000315491 TMEM268Q5VZI3 342 aa13.02□□□□□ -0.33
TUBB3-201ENST00000315491 CCDC144NLQ6NUI1 221 aa13.02□□□□□ -0.33
TUBB3-201ENST00000315491 BRD3OSQ6XYD6 125 aa13.02□□□□□ -0.33
TUBB3-201ENST00000315491 SELENOHQ8IZQ5 122 aaKnown RBP13.02□□□□□ -0.33
TUBB3-201ENST00000315491 AJUBAQ96IF1 538 aa13.02□□□□□ -0.33
TUBB3-201ENST00000315491 CYTL1Q9NRR1 136 aa13.02□□□□□ -0.33
TUBB3-201ENST00000315491 CREBBPQ92793 2442 aa13.01□□□□□ -0.33
TUBB3-201ENST00000315491 DBX1A6NMT0 343 aa13.01□□□□□ -0.33
TUBB3-201ENST00000315491 RTL8BQ17RB0 113 aa13.01□□□□□ -0.33
TUBB3-201ENST00000315491 DYNAPQ8N1N2 210 aa13.01□□□□□ -0.33
TUBB3-201ENST00000315491 LILRB2Q8N423 598 aa13.01□□□□□ -0.33
TUBB3-201ENST00000315491 OR4S2Q8NH73 311 aa13.01□□□□□ -0.33
TUBB3-201ENST00000315491 IL22RA2Q969J5 263 aa13.01□□□□□ -0.33
TUBB3-201ENST00000315491 SMIM8Q96KF7 97 aa13.01□□□□□ -0.33
TUBB3-201ENST00000315491 TMPRSS5Q9H3S3 457 aa13.01□□□□□ -0.33
TUBB3-201ENST00000315491 ITPR3Q14573 2671 aa13□□□□□ -0.33
TUBB3-201ENST00000315491 S1PR2O95136 353 aa13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 62.6 ms