RNA–Protein interactions for RNA: ENST00000315286.12

CCDC43-201, Transcript of coiled-coil domain containing 43, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC43, Length 2,082 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC43-201ENST00000315286 A0A1B0GW64 132 aa14.97□□□□□ -0.01
CCDC43-201ENST00000315286 BTBD17A6NE02 478 aa14.97□□□□□ -0.01
CCDC43-201ENST00000315286 FSTL3O95633 263 aa14.97□□□□□ -0.01
CCDC43-201ENST00000315286 IFNA10P01566 189 aa14.97□□□□□ -0.01
CCDC43-201ENST00000315286 IGHV1-8P0DP01 117 aa14.97□□□□□ -0.01
CCDC43-201ENST00000315286 DIAPH2-AS1Q14236 149 aa14.97□□□□□ -0.01
CCDC43-201ENST00000315286 VWC2Q2TAL6 325 aa14.97□□□□□ -0.01
CCDC43-201ENST00000315286 DHRS7BQ6IAN0 325 aaPredicted RBP14.97□□□□□ -0.01
CCDC43-201ENST00000315286 CENPVQ7Z7K6 275 aaPredicted RBP14.97□□□□□ -0.01
CCDC43-201ENST00000315286 ABHD12Q8N2K0 398 aa14.97□□□□□ -0.01
CCDC43-201ENST00000315286 LINC00311Q8N616 119 aa14.97□□□□□ -0.01
CCDC43-201ENST00000315286 RAB1BQ9H0U4 201 aa14.97□□□□□ -0.01
CCDC43-201ENST00000315286 FOXA2Q9Y261 457 aaPredicted RBP14.97□□□□□ -0.01
CCDC43-201ENST00000315286 A0A087X0M5 115 aa14.96□□□□□ -0.01
CCDC43-201ENST00000315286 TRBV23-1A0A0A0MS06 115 aa14.96□□□□□ -0.01
CCDC43-201ENST00000315286 A0A1B0GX30 115 aa14.96□□□□□ -0.01
CCDC43-201ENST00000315286 RRHO14718 337 aa14.96□□□□□ -0.01
CCDC43-201ENST00000315286 SOD3P08294 240 aa14.96□□□□□ -0.01
CCDC43-201ENST00000315286 IL6RP08887 468 aaPredicted RBP14.96□□□□□ -0.01
CCDC43-201ENST00000315286 MYOD1P15172 320 aa14.96□□□□□ -0.01
CCDC43-201ENST00000315286 NPBWR1P48145 328 aa14.96□□□□□ -0.01
CCDC43-201ENST00000315286 ELLP55199 621 aaPredicted RBP14.96□□□□□ -0.01
CCDC43-201ENST00000315286 ZNF726P1Q15940 193 aa14.96□□□□□ -0.01
CCDC43-201ENST00000315286 C11orf71Q6IPW1 123 aa14.96□□□□□ -0.01
CCDC43-201ENST00000315286 C8orf31Q8N9H6 132 aa14.96□□□□□ -0.01
CCDC43-201ENST00000315286 TIMM9Q9Y5J7 89 aa14.96□□□□□ -0.01
CCDC43-201ENST00000315286 RBFOX3A6NFN3 312 aa14.96□□□□□ -0.02
CCDC43-201ENST00000315286 TSPAN4O14817 238 aa14.96□□□□□ -0.02
CCDC43-201ENST00000315286 SNAPINO95295 136 aa14.96□□□□□ -0.02
CCDC43-201ENST00000315286 FGF7P21781 194 aa14.96□□□□□ -0.02
CCDC43-201ENST00000315286 GNLYP22749 145 aa14.96□□□□□ -0.02
CCDC43-201ENST00000315286 HSPE1P61604 102 aaKnown RBP14.96□□□□□ -0.02
CCDC43-201ENST00000315286 KIAA1456Q9P272 454 aa14.96□□□□□ -0.02
CCDC43-201ENST00000315286 H0YJW9 148 aa14.95□□□□□ -0.02
CCDC43-201ENST00000315286 H7C2Y5 167 aa14.95□□□□□ -0.02
CCDC43-201ENST00000315286 HOXA1P49639 335 aaPredicted RBP14.95□□□□□ -0.02
CCDC43-201ENST00000315286 RPP30P78346 268 aaKnown RBP14.95□□□□□ -0.02
CCDC43-201ENST00000315286 OR5AN1Q8NGI8 311 aa14.95□□□□□ -0.02
CCDC43-201ENST00000315286 OR9G1Q8NH87 305 aa14.95□□□□□ -0.02
CCDC43-201ENST00000315286 TMEM170AQ8WVE7 144 aa14.95□□□□□ -0.02
CCDC43-201ENST00000315286 ST6GALNAC6Q969X2 333 aa14.95□□□□□ -0.02
CCDC43-201ENST00000315286 TRAV1-1A0A0B4J248 108 aa14.94□□□□□ -0.02
CCDC43-201ENST00000315286 UPK2O00526 184 aa14.94□□□□□ -0.02
CCDC43-201ENST00000315286 HBE1P02100 147 aa14.94□□□□□ -0.02
CCDC43-201ENST00000315286 MDKP21741 143 aaPredicted RBP14.94□□□□□ -0.02
CCDC43-201ENST00000315286 PLA2G5P39877 138 aa14.94□□□□□ -0.02
CCDC43-201ENST00000315286 HAGHQ16775 308 aa14.94□□□□□ -0.02
CCDC43-201ENST00000315286 C4orf17Q53FE4 359 aa14.94□□□□□ -0.02
CCDC43-201ENST00000315286 TMEM41BQ5BJD5 291 aa14.94□□□□□ -0.02
CCDC43-201ENST00000315286 ETV3LQ6ZN32 361 aa14.94□□□□□ -0.02
CCDC43-201ENST00000315286 SSX7Q7RTT5 188 aa14.94□□□□□ -0.02
CCDC43-201ENST00000315286 TMEM186Q96B77 213 aa14.94□□□□□ -0.02
CCDC43-201ENST00000315286 RCC1LQ96I51 464 aaKnown RBP14.94□□□□□ -0.02
CCDC43-201ENST00000315286 OR51B2Q9Y5P1 312 aa14.94□□□□□ -0.02
CCDC43-201ENST00000315286 KPTNQ9Y664 436 aa14.94□□□□□ -0.02
CCDC43-201ENST00000315286 APOA2P02652 100 aa14.94□□□□□ -0.02
CCDC43-201ENST00000315286 ACSM6Q6P461 480 aa14.94□□□□□ -0.02
CCDC43-201ENST00000315286 ITLN2Q8WWU7 325 aaPredicted RBP14.94□□□□□ -0.02
CCDC43-201ENST00000315286 MBD3L1Q8WWY6 194 aa14.94□□□□□ -0.02
CCDC43-201ENST00000315286 NABP2Q9BQ15 211 aa14.94□□□□□ -0.02
CCDC43-201ENST00000315286 SLC35B3Q9H1N7 401 aa14.94□□□□□ -0.02
CCDC43-201ENST00000315286 TMEM133Q9H2Q1 129 aa14.94□□□□□ -0.02
CCDC43-201ENST00000315286 A0A1W2PPR1 153 aa14.93□□□□□ -0.02
CCDC43-201ENST00000315286 IGKV1D-33P01593 117 aa14.93□□□□□ -0.02
CCDC43-201ENST00000315286 IGKV1-33P01594 117 aa14.93□□□□□ -0.02
CCDC43-201ENST00000315286 DLX1P56177 255 aa14.93□□□□□ -0.02
CCDC43-201ENST00000315286 RAB2AP61019 212 aa14.93□□□□□ -0.02
CCDC43-201ENST00000315286 TMEM88Q6PEY1 159 aa14.93□□□□□ -0.02
CCDC43-201ENST00000315286 LCN15Q6UWW0 184 aa14.93□□□□□ -0.02
CCDC43-201ENST00000315286 OSR1Q8TAX0 266 aaPredicted RBP14.93□□□□□ -0.02
CCDC43-201ENST00000315286 NPCDR1Q9BY65 106 aa14.93□□□□□ -0.02
CCDC43-201ENST00000315286 PRNDQ9UKY0 176 aa14.93□□□□□ -0.02
CCDC43-201ENST00000315286 SCAF4O95104 1147 aaKnown RBP14.93□□□□□ -0.02
CCDC43-201ENST00000315286 SAA1P0DJI8 122 aaPredicted RBP14.93□□□□□ -0.02
CCDC43-201ENST00000315286 CD1BP29016 333 aa14.93□□□□□ -0.02
CCDC43-201ENST00000315286 FAM71F2Q6NXP2 309 aa14.93□□□□□ -0.02
CCDC43-201ENST00000315286 CLDND2Q8NHS1 167 aa14.93□□□□□ -0.02
CCDC43-201ENST00000315286 HINT2Q9BX68 163 aa14.93□□□□□ -0.02
CCDC43-201ENST00000315286 PRSS46E5RG02 174 aa14.92□□□□□ -0.02
CCDC43-201ENST00000315286 EIF3GO75821 320 aaKnown RBP eCLIP14.92□□□□□ -0.02
CCDC43-201ENST00000315286 KBTBD11O94819 623 aa14.92□□□□□ -0.02
CCDC43-201ENST00000315286 OPN1MWP04001 364 aa14.92□□□□□ -0.02
CCDC43-201ENST00000315286 OPN1MW2P0DN77 364 aa14.92□□□□□ -0.02
CCDC43-201ENST00000315286 OPN1MW3P0DN78 364 aa14.92□□□□□ -0.02
CCDC43-201ENST00000315286 OR13C7P0DN81 318 aa14.92□□□□□ -0.02
CCDC43-201ENST00000315286 ZNF137PP52743 207 aa14.92□□□□□ -0.02
CCDC43-201ENST00000315286 RPP25LQ8N5L8 163 aaKnown RBP14.92□□□□□ -0.02
CCDC43-201ENST00000315286 CLRN3Q8NCR9 226 aa14.92□□□□□ -0.02
CCDC43-201ENST00000315286 HARBI1Q96MB7 349 aa14.92□□□□□ -0.02
CCDC43-201ENST00000315286 AIFM2Q9BRQ8 373 aa14.92□□□□□ -0.02
CCDC43-201ENST00000315286 SMDT1Q9H4I9 107 aa14.92□□□□□ -0.02
CCDC43-201ENST00000315286 BET1LQ9NYM9 111 aa14.92□□□□□ -0.02
CCDC43-201ENST00000315286 TACC2O95359 2948 aa14.92□□□□□ -0.02
CCDC43-201ENST00000315286 FGF8P55075 233 aaPredicted RBP14.91□□□□□ -0.02
CCDC43-201ENST00000315286 PRB3Q04118 309 aaPredicted RBP14.91□□□□□ -0.02
CCDC43-201ENST00000315286 TMEM177Q53S58 311 aa14.91□□□□□ -0.02
CCDC43-201ENST00000315286 ZNF787Q6DD87 383 aa14.91□□□□□ -0.02
CCDC43-201ENST00000315286 LHX4Q969G2 390 aa14.91□□□□□ -0.02
CCDC43-201ENST00000315286 FLYWCH2Q96CP2 140 aaKnown RBP14.91□□□□□ -0.02
CCDC43-201ENST00000315286 WDR83OSQ9Y284 106 aa14.91□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 63.4 ms