RNA–Protein interactions for RNA: ENST00000315285.7

SPAST-201, Transcript of spastin, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene SPAST, Length 5,117 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPAST-201ENST00000315285 F8VVB4 439 aa11.67□□□□□ -0.54
SPAST-201ENST00000315285 F8VWA3 439 aa11.67□□□□□ -0.54
SPAST-201ENST00000315285 DDTP30046 118 aa11.67□□□□□ -0.54
SPAST-201ENST00000315285 GLRXP35754 106 aa11.67□□□□□ -0.54
SPAST-201ENST00000315285 PSG7Q13046 419 aa11.67□□□□□ -0.54
SPAST-201ENST00000315285 SFRP2Q96HF1 295 aa11.67□□□□□ -0.54
SPAST-201ENST00000315285 VENTXO95231 258 aa11.66□□□□□ -0.54
SPAST-201ENST00000315285 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa11.66□□□□□ -0.54
SPAST-201ENST00000315285 EFNA2O43921 213 aa11.66□□□□□ -0.54
SPAST-201ENST00000315285 C18orf12Q96KH6 178 aa11.66□□□□□ -0.54
SPAST-201ENST00000315285 IFITM10A6NMD0 228 aa11.66□□□□□ -0.54
SPAST-201ENST00000315285 OR51G1Q8NGK1 321 aa11.66□□□□□ -0.54
SPAST-201ENST00000315285 OR13A1Q8NGR1 328 aa11.66□□□□□ -0.54
SPAST-201ENST00000315285 TMEM186Q96B77 213 aa11.66□□□□□ -0.54
SPAST-201ENST00000315285 ELOVL1Q9BW60 279 aa11.66□□□□□ -0.54
SPAST-201ENST00000315285 IGKV1D-13A0A0B4J2D9 117 aa11.66□□□□□ -0.54
SPAST-201ENST00000315285 IGKV1-13P0DP09 117 aa11.66□□□□□ -0.54
SPAST-201ENST00000315285 IGKV1D-8A0A087WSZ0 117 aa11.65□□□□□ -0.54
SPAST-201ENST00000315285 TRBV6-7A0A0A0MS04 114 aa11.65□□□□□ -0.54
SPAST-201ENST00000315285 CA2P00918 260 aa11.65□□□□□ -0.54
SPAST-201ENST00000315285 CYP2G1PQ6ZSU1 146 aa11.65□□□□□ -0.54
SPAST-201ENST00000315285 GATAD1Q8WUU5 269 aa11.65□□□□□ -0.54
SPAST-201ENST00000315285 KLHDC3Q9BQ90 382 aa11.65□□□□□ -0.54
SPAST-201ENST00000315285 GGACTQ9BVM4 153 aa11.65□□□□□ -0.54
SPAST-201ENST00000315285 HSPB7Q9UBY9 170 aa11.65□□□□□ -0.54
SPAST-201ENST00000315285 CD40P25942 277 aa11.65□□□□□ -0.54
SPAST-201ENST00000315285 ATP5IP56385 69 aaPredicted RBP11.65□□□□□ -0.54
SPAST-201ENST00000315285 TIMM23BQ5SRD1 257 aa11.65□□□□□ -0.54
SPAST-201ENST00000315285 NPIPB3Q92617 1050 aa11.65□□□□□ -0.54
SPAST-201ENST00000315285 TMEM189A5PLL7 270 aa11.65□□□□□ -0.54
SPAST-201ENST00000315285 AMY1AP04745 511 aa11.65□□□□□ -0.54
SPAST-201ENST00000315285 LHX2P50458 406 aa11.65□□□□□ -0.54
SPAST-201ENST00000315285 CLDN18P56856 261 aa11.65□□□□□ -0.54
SPAST-201ENST00000315285 OR4B1Q8NGF8 309 aa11.65□□□□□ -0.54
SPAST-201ENST00000315285 SLC25A33Q9BSK2 321 aa11.65□□□□□ -0.54
SPAST-201ENST00000315285 DMRT1Q9Y5R6 373 aa11.65□□□□□ -0.54
SPAST-201ENST00000315285 TRPM7Q96QT4 1865 aa11.65□□□□□ -0.55
SPAST-201ENST00000315285 RRHO14718 337 aa11.65□□□□□ -0.55
SPAST-201ENST00000315285 REG1AP05451 166 aa11.65□□□□□ -0.55
SPAST-201ENST00000315285 UCNP55089 124 aa11.65□□□□□ -0.55
SPAST-201ENST00000315285 COL5A1-AS1Q5SY13 56 aa11.65□□□□□ -0.55
SPAST-201ENST00000315285 TMEM208Q9BTX3 173 aa11.65□□□□□ -0.55
SPAST-201ENST00000315285 MRPL37Q9BZE1 423 aaKnown RBP11.65□□□□□ -0.55
SPAST-201ENST00000315285 FGF16O43320 207 aa11.64□□□□□ -0.55
SPAST-201ENST00000315285 IL6RP08887 468 aaPredicted RBP11.64□□□□□ -0.55
SPAST-201ENST00000315285 COMPP49747 757 aaPredicted RBP11.64□□□□□ -0.55
SPAST-201ENST00000315285 SRSF3P84103 164 aaKnown RBP11.64□□□□□ -0.55
SPAST-201ENST00000315285 TFF3Q07654 80 aa11.64□□□□□ -0.55
SPAST-201ENST00000315285 KIAA1644Q3SXP7 199 aa11.64□□□□□ -0.55
SPAST-201ENST00000315285 TMEM177Q53S58 311 aa11.64□□□□□ -0.55
SPAST-201ENST00000315285 ZNF525Q8N782 197 aa11.64□□□□□ -0.55
SPAST-201ENST00000315285 WDR31Q8NA23 367 aa11.64□□□□□ -0.55
SPAST-201ENST00000315285 CLDND2Q8NHS1 167 aa11.64□□□□□ -0.55
SPAST-201ENST00000315285 CDC42EP3Q9UKI2 254 aa11.64□□□□□ -0.55
SPAST-201ENST00000315285 PLXNA3P51805 1871 aa11.64□□□□□ -0.55
SPAST-201ENST00000315285 LOC389332A0A1B0GUA5 103 aa11.64□□□□□ -0.55
SPAST-201ENST00000315285 IGHV3-48P01763 117 aa11.64□□□□□ -0.55
SPAST-201ENST00000315285 SRIP30626 198 aa11.64□□□□□ -0.55
SPAST-201ENST00000315285 PCSK4Q6UW60 755 aa11.64□□□□□ -0.55
SPAST-201ENST00000315285 MRPL32Q9BYC8 188 aaKnown RBP11.64□□□□□ -0.55
SPAST-201ENST00000315285 GRIFINA4D1Z8 144 aa11.64□□□□□ -0.55
SPAST-201ENST00000315285 SPANXN1Q5VSR9 72 aa11.64□□□□□ -0.55
SPAST-201ENST00000315285 C1orf162Q8NEQ5 155 aaPredicted RBP11.64□□□□□ -0.55
SPAST-201ENST00000315285 PLPPR1Q8TBJ4 325 aa11.64□□□□□ -0.55
SPAST-201ENST00000315285 WFIKKN1Q96NZ8 548 aa11.64□□□□□ -0.55
SPAST-201ENST00000315285 CELA3BP08861 270 aa11.64□□□□□ -0.55
SPAST-201ENST00000315285 DEPPQ9NTK1 212 aa11.64□□□□□ -0.55
SPAST-201ENST00000315285 PPIAL4CA0A0B4J2A2 164 aa11.63□□□□□ -0.55
SPAST-201ENST00000315285 SH2D7A6NKC9 451 aaPredicted RBP11.63□□□□□ -0.55
SPAST-201ENST00000315285 PPIAL4GP0DN37 164 aa11.63□□□□□ -0.55
SPAST-201ENST00000315285 IGHV1-2P23083 117 aa11.63□□□□□ -0.55
SPAST-201ENST00000315285 CENPWQ5EE01 88 aa11.63□□□□□ -0.55
SPAST-201ENST00000315285 DPF1Q92782 380 aa11.63□□□□□ -0.55
SPAST-201ENST00000315285 DCTN5Q9BTE1 182 aa11.63□□□□□ -0.55
SPAST-201ENST00000315285 SCN8AQ9UQD0 1980 aa11.63□□□□□ -0.55
SPAST-201ENST00000315285 LDLRAD4O15165 306 aa11.63□□□□□ -0.55
SPAST-201ENST00000315285 TNFSF10P50591 281 aa11.63□□□□□ -0.55
SPAST-201ENST00000315285 RELBQ01201 579 aa11.63□□□□□ -0.55
SPAST-201ENST00000315285 SCGB1D4Q6XE38 83 aa11.63□□□□□ -0.55
SPAST-201ENST00000315285 A6NDN8 102 aa11.63□□□□□ -0.55
SPAST-201ENST00000315285 KLF7O75840 302 aaPredicted RBP11.63□□□□□ -0.55
SPAST-201ENST00000315285 SPATA45Q537H7 98 aa11.63□□□□□ -0.55
SPAST-201ENST00000315285 C17orf82Q86X59 251 aaPredicted RBP11.63□□□□□ -0.55
SPAST-201ENST00000315285 TMEM183AQ8IXX5 376 aa11.63□□□□□ -0.55
SPAST-201ENST00000315285 TMEM171Q8WVE6 324 aa11.63□□□□□ -0.55
SPAST-201ENST00000315285 TRBV23-1A0A0A0MS06 115 aa11.63□□□□□ -0.55
SPAST-201ENST00000315285 CLPSP04118 112 aa11.63□□□□□ -0.55
SPAST-201ENST00000315285 MGPP08493 103 aa11.63□□□□□ -0.55
SPAST-201ENST00000315285 RPL7P18124 248 aaKnown RBP11.63□□□□□ -0.55
SPAST-201ENST00000315285 TWIST1Q15672 202 aa11.63□□□□□ -0.55
SPAST-201ENST00000315285 PGLYRP4Q96LB8 373 aa11.63□□□□□ -0.55
SPAST-201ENST00000315285 SGK494Q96LW2 274 aa11.63□□□□□ -0.55
SPAST-201ENST00000315285 RABAC1Q9UI14 185 aa11.63□□□□□ -0.55
SPAST-201ENST00000315285 IGHV2OR16-5A0A0B4J2B6 119 aa11.62□□□□□ -0.55
SPAST-201ENST00000315285 IQCF6A8MYZ5 107 aa11.62□□□□□ -0.55
SPAST-201ENST00000315285 CRYGSP22914 178 aa11.62□□□□□ -0.55
SPAST-201ENST00000315285 FCGR2BP31994 310 aaPredicted RBP11.62□□□□□ -0.55
SPAST-201ENST00000315285 KIR2DL2P43627 348 aaPredicted RBP11.62□□□□□ -0.55
SPAST-201ENST00000315285 PMCHL1Q16048 86 aa11.62□□□□□ -0.55
SPAST-201ENST00000315285 RNF115Q9Y4L5 304 aa11.62□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms