RNA–Protein interactions for RNA: ENST00000312438.7

CLCF1-201, Transcript of cardiotrophin like cytokine factor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CLCF1, Length 1,844 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCF1-201ENST00000312438 HSD17B13Q7Z5P4 300 aaPredicted RBP13.56□□□□□ -0.24
CLCF1-201ENST00000312438 PUSL1Q8N0Z8 303 aaKnown RBP13.56□□□□□ -0.24
CLCF1-201ENST00000312438 EIF4E3Q8N5X7 224 aaKnown RBP13.56□□□□□ -0.24
CLCF1-201ENST00000312438 KIR3DL3Q8N743 410 aa13.56□□□□□ -0.24
CLCF1-201ENST00000312438 OR10P1Q8NGE3 313 aa13.56□□□□□ -0.24
CLCF1-201ENST00000312438 OR4P4Q8NGL7 312 aa13.56□□□□□ -0.24
CLCF1-201ENST00000312438 ZNF257Q9Y2Q1 563 aa13.56□□□□□ -0.24
CLCF1-201ENST00000312438 INSIG2Q9Y5U4 225 aa13.56□□□□□ -0.24
CLCF1-201ENST00000312438 KBTBD11O94819 623 aa13.55□□□□□ -0.24
CLCF1-201ENST00000312438 SAA1P0DJI8 122 aaPredicted RBP13.55□□□□□ -0.24
CLCF1-201ENST00000312438 VDAC2P45880 294 aaPredicted RBP13.55□□□□□ -0.24
CLCF1-201ENST00000312438 PRB3Q04118 309 aaPredicted RBP13.55□□□□□ -0.24
CLCF1-201ENST00000312438 OR8G2PQ6IF36 304 aa13.55□□□□□ -0.24
CLCF1-201ENST00000312438 LILRB2Q8N423 598 aa13.55□□□□□ -0.24
CLCF1-201ENST00000312438 VSTM2AQ8TAG5 236 aa13.55□□□□□ -0.24
CLCF1-201ENST00000312438 SCGB1C1Q8TD33 95 aa13.55□□□□□ -0.24
CLCF1-201ENST00000312438 PINX1Q96BK5 328 aaKnown RBP13.55□□□□□ -0.24
CLCF1-201ENST00000312438 RBMXL1Q96E39 390 aaKnown RBP13.55□□□□□ -0.24
CLCF1-201ENST00000312438 SH3BGRL3Q9H299 93 aa13.55□□□□□ -0.24
CLCF1-201ENST00000312438 HEYLQ9NQ87 328 aaPredicted RBP13.55□□□□□ -0.24
CLCF1-201ENST00000312438 DOPEY1Q5JWR5 2465 aa13.55□□□□□ -0.24
CLCF1-201ENST00000312438 PMS2P5A8MQ11 134 aa13.55□□□□□ -0.24
CLCF1-201ENST00000312438 FGF2P09038 288 aa13.55□□□□□ -0.24
CLCF1-201ENST00000312438 COX6B1P14854 86 aa13.55□□□□□ -0.24
CLCF1-201ENST00000312438 LGALS7P47929 136 aa13.55□□□□□ -0.24
CLCF1-201ENST00000312438 LMO4P61968 165 aa13.55□□□□□ -0.24
CLCF1-201ENST00000312438 SLC38A11Q08AI6 406 aa13.55□□□□□ -0.24
CLCF1-201ENST00000312438 SLC25A24Q6NUK1 477 aa13.55□□□□□ -0.24
CLCF1-201ENST00000312438 OR2G3Q8NGZ4 309 aa13.55□□□□□ -0.24
CLCF1-201ENST00000312438 OR4A5Q8NH83 315 aa13.55□□□□□ -0.24
CLCF1-201ENST00000312438 CLDND2Q8NHS1 167 aa13.55□□□□□ -0.24
CLCF1-201ENST00000312438 RPEQ96AT9 228 aa13.55□□□□□ -0.24
CLCF1-201ENST00000312438 MS4A7Q9GZW8 240 aaPredicted RBP13.55□□□□□ -0.24
CLCF1-201ENST00000312438 SIRT7Q9NRC8 400 aa13.55□□□□□ -0.24
CLCF1-201ENST00000312438 OR51B2Q9Y5P1 312 aa13.55□□□□□ -0.24
CLCF1-201ENST00000312438 KPTNQ9Y664 436 aa13.55□□□□□ -0.24
CLCF1-201ENST00000312438 HRNRQ86YZ3 2850 aaPredicted RBP13.54□□□□□ -0.24
CLCF1-201ENST00000312438 IGHV1-3A0A0C4DH29 117 aa13.54□□□□□ -0.24
CLCF1-201ENST00000312438 A8MXK9 166 aa13.54□□□□□ -0.24
CLCF1-201ENST00000312438 LY6LH3BQJ8 138 aa13.54□□□□□ -0.24
CLCF1-201ENST00000312438 MARC2Q969Z3 335 aa13.54□□□□□ -0.24
CLCF1-201ENST00000312438 PARD6GQ9BYG4 376 aaPredicted RBP13.54□□□□□ -0.24
CLCF1-201ENST00000312438 UNKLQ9H9P5 680 aaKnown RBP13.54□□□□□ -0.24
CLCF1-201ENST00000312438 ENY2Q9NPA8 101 aa13.54□□□□□ -0.24
CLCF1-201ENST00000312438 PARP11Q9NR21 331 aa13.54□□□□□ -0.24
CLCF1-201ENST00000312438 NUDT19A8MXV4 375 aa13.53□□□□□ -0.24
CLCF1-201ENST00000312438 UMAD1C9J7I0 102 aa13.53□□□□□ -0.24
CLCF1-201ENST00000312438 TEX46H3BTG2 121 aa13.53□□□□□ -0.24
CLCF1-201ENST00000312438 IFNA10P01566 189 aa13.53□□□□□ -0.24
CLCF1-201ENST00000312438 ARG1P05089 322 aa13.53□□□□□ -0.24
CLCF1-201ENST00000312438 HTR1DP28221 377 aa13.53□□□□□ -0.24
CLCF1-201ENST00000312438 HOXA1P49639 335 aaPredicted RBP13.53□□□□□ -0.24
CLCF1-201ENST00000312438 LRRC75BQ2VPJ9 315 aa13.53□□□□□ -0.24
CLCF1-201ENST00000312438 OR5B3Q8NH48 314 aa13.53□□□□□ -0.24
CLCF1-201ENST00000312438 DPM3Q9P2X0 92 aa13.53□□□□□ -0.24
CLCF1-201ENST00000312438 C15orf62A8K5M9 175 aa13.53□□□□□ -0.24
CLCF1-201ENST00000312438 I3L521 148 aa13.53□□□□□ -0.24
CLCF1-201ENST00000312438 NDUFS8O00217 210 aa13.53□□□□□ -0.24
CLCF1-201ENST00000312438 OR8U8P0C7N1 319 aa13.53□□□□□ -0.24
CLCF1-201ENST00000312438 USF1P22415 310 aaPredicted RBP13.53□□□□□ -0.24
CLCF1-201ENST00000312438 LCN2P80188 198 aa13.53□□□□□ -0.24
CLCF1-201ENST00000312438 PAX2Q02962 417 aa13.53□□□□□ -0.24
CLCF1-201ENST00000312438 PXDC1Q5TGL8 231 aa13.53□□□□□ -0.24
CLCF1-201ENST00000312438 MOB3BQ86TA1 216 aa13.53□□□□□ -0.24
CLCF1-201ENST00000312438 THNSL2Q86YJ6 484 aa13.53□□□□□ -0.24
CLCF1-201ENST00000312438 TMEM167AQ8TBQ9 72 aa13.53□□□□□ -0.24
CLCF1-201ENST00000312438 FAM168AQ92567 244 aa13.53□□□□□ -0.24
CLCF1-201ENST00000312438 TEX50A0A1B0GTY4 177 aa13.52□□□□□ -0.25
CLCF1-201ENST00000312438 TRIM77I1YAP6 450 aa13.52□□□□□ -0.25
CLCF1-201ENST00000312438 IGLV2-23P01705 113 aa13.52□□□□□ -0.25
CLCF1-201ENST00000312438 PRH1P02810 166 aa13.52□□□□□ -0.25
CLCF1-201ENST00000312438 CEACAM3P40198 252 aa13.52□□□□□ -0.25
CLCF1-201ENST00000312438 ATP5J2P56134 94 aa13.52□□□□□ -0.25
CLCF1-201ENST00000312438 PRCDQ00LT1 54 aa13.52□□□□□ -0.25
CLCF1-201ENST00000312438 VMA21Q3ZAQ7 101 aa13.52□□□□□ -0.25
CLCF1-201ENST00000312438 TMEM182Q6ZP80 229 aaPredicted RBP13.52□□□□□ -0.25
CLCF1-201ENST00000312438 PIMREGQ9BSJ6 248 aa13.52□□□□□ -0.25
CLCF1-201ENST00000312438 HRH4Q9H3N8 390 aa13.52□□□□□ -0.25
CLCF1-201ENST00000312438 ZFYVE26Q68DK2 2539 aa13.52□□□□□ -0.25
CLCF1-201ENST00000312438 LRBAP50851 2863 aa13.51□□□□□ -0.25
CLCF1-201ENST00000312438 IGHV3-72A0A0B4J1Y9 119 aa13.51□□□□□ -0.25
CLCF1-201ENST00000312438 IGHV2-70DA0A0C4DH43 119 aa13.51□□□□□ -0.25
CLCF1-201ENST00000312438 RAB19A4D1S5 217 aa13.51□□□□□ -0.25
CLCF1-201ENST00000312438 FOXH1O75593 365 aa13.51□□□□□ -0.25
CLCF1-201ENST00000312438 RPL8P62917 257 aaKnown RBP13.51□□□□□ -0.25
CLCF1-201ENST00000312438 TPTE2P1Q5T6R2 138 aa13.51□□□□□ -0.25
CLCF1-201ENST00000312438 HCP5Q6MZN7 132 aa13.51□□□□□ -0.25
CLCF1-201ENST00000312438 Q6ZRG5 221 aa13.51□□□□□ -0.25
CLCF1-201ENST00000312438 VMO1Q7Z5L0 202 aa13.51□□□□□ -0.25
CLCF1-201ENST00000312438 TMEM147Q9BVK8 224 aa13.51□□□□□ -0.25
CLCF1-201ENST00000312438 WDR61Q9GZS3 305 aaKnown RBP13.51□□□□□ -0.25
CLCF1-201ENST00000312438 MMP26Q9NRE1 261 aa13.51□□□□□ -0.25
CLCF1-201ENST00000312438 ZNF462Q96JM2 2506 aa13.51□□□□□ -0.25
CLCF1-201ENST00000312438 ODF3BA8MYP8 253 aa13.5□□□□□ -0.25
CLCF1-201ENST00000312438 CAMLGP49069 296 aa13.5□□□□□ -0.25
CLCF1-201ENST00000312438 F2RL1P55085 397 aa13.5□□□□□ -0.25
CLCF1-201ENST00000312438 RAB11AP62491 216 aa13.5□□□□□ -0.25
CLCF1-201ENST00000312438 RUNX1Q01196 453 aa13.5□□□□□ -0.25
CLCF1-201ENST00000312438 BTNL8Q6UX41 500 aa13.5□□□□□ -0.25
CLCF1-201ENST00000312438 IL34Q6ZMJ4 242 aa13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms