RNA–Protein interactions for RNA: ENST00000309428.9

RETREG3-201, Transcript of reticulophagy regulator family member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RETREG3, Length 3,759 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG3-201ENST00000309428 DLL3Q9NYJ7 618 aa10.68□□□□□ -0.7
RETREG3-201ENST00000309428 DKK1O94907 266 aa10.68□□□□□ -0.7
RETREG3-201ENST00000309428 SSTR5P35346 364 aa10.68□□□□□ -0.7
RETREG3-201ENST00000309428 RAB7AP51149 207 aa10.68□□□□□ -0.7
RETREG3-201ENST00000309428 CD81P60033 236 aa10.68□□□□□ -0.7
RETREG3-201ENST00000309428 FGF12P61328 243 aa10.68□□□□□ -0.7
RETREG3-201ENST00000309428 COTL1Q14019 142 aa10.68□□□□□ -0.7
RETREG3-201ENST00000309428 ABHD12Q8N2K0 398 aa10.68□□□□□ -0.7
RETREG3-201ENST00000309428 KCNMB1Q16558 191 aa10.67□□□□□ -0.7
RETREG3-201ENST00000309428 OR6C3Q9NZP0 311 aa10.67□□□□□ -0.7
RETREG3-201ENST00000309428 CPAMD8Q8IZJ3 1885 aa10.67□□□□□ -0.7
RETREG3-201ENST00000309428 C10orf142B7Z368 130 aa10.67□□□□□ -0.7
RETREG3-201ENST00000309428 ARL14EPLP0DKL9 152 aa10.67□□□□□ -0.7
RETREG3-201ENST00000309428 APELAP0DMC3 54 aa10.67□□□□□ -0.7
RETREG3-201ENST00000309428 GZMHP20718 246 aa10.67□□□□□ -0.7
RETREG3-201ENST00000309428 MPV17P39210 176 aa10.67□□□□□ -0.7
RETREG3-201ENST00000309428 FOXF2Q12947 444 aa10.67□□□□□ -0.7
RETREG3-201ENST00000309428 DRAM1Q8N682 238 aa10.67□□□□□ -0.7
RETREG3-201ENST00000309428 SPRR3Q9UBC9 169 aa10.67□□□□□ -0.7
RETREG3-201ENST00000309428 OR2H2O95918 312 aa10.67□□□□□ -0.7
RETREG3-201ENST00000309428 GFRA1P56159 465 aa10.67□□□□□ -0.7
RETREG3-201ENST00000309428 LBHQ53QV2 105 aaPredicted RBP10.67□□□□□ -0.7
RETREG3-201ENST00000309428 Q6ZPA2 131 aa10.67□□□□□ -0.7
RETREG3-201ENST00000309428 SMG1Q96Q15 3661 aaKnown RBP10.66□□□□□ -0.7
RETREG3-201ENST00000309428 FAM157AC9JC47 383 aa10.66□□□□□ -0.7
RETREG3-201ENST00000309428 RAMP3O60896 148 aa10.66□□□□□ -0.7
RETREG3-201ENST00000309428 CISD2Q8N5K1 135 aaKnown RBP10.66□□□□□ -0.7
RETREG3-201ENST00000309428 SLC24A4Q8NFF2 622 aa10.66□□□□□ -0.7
RETREG3-201ENST00000309428 TMEM208Q9BTX3 173 aa10.66□□□□□ -0.7
RETREG3-201ENST00000309428 POLDIP2Q9Y2S7 368 aa10.66□□□□□ -0.7
RETREG3-201ENST00000309428 SCO2A0A1W2PP80 73 aa10.66□□□□□ -0.7
RETREG3-201ENST00000309428 RAB29O14966 203 aa10.66□□□□□ -0.7
RETREG3-201ENST00000309428 PLAUP00749 431 aa10.66□□□□□ -0.7
RETREG3-201ENST00000309428 ZNF137PP52743 207 aa10.66□□□□□ -0.7
RETREG3-201ENST00000309428 RANP62826 216 aaKnown RBP10.66□□□□□ -0.7
RETREG3-201ENST00000309428 CEACAM21Q3KPI0 293 aa10.66□□□□□ -0.7
RETREG3-201ENST00000309428 SCCPDHQ8NBX0 429 aa10.66□□□□□ -0.7
RETREG3-201ENST00000309428 PLPPR1Q8TBJ4 325 aa10.66□□□□□ -0.7
RETREG3-201ENST00000309428 ZNF391Q9UJN7 358 aa10.66□□□□□ -0.7
RETREG3-201ENST00000309428 CD1BP29016 333 aa10.66□□□□□ -0.7
RETREG3-201ENST00000309428 ADMP35318 185 aa10.66□□□□□ -0.7
RETREG3-201ENST00000309428 OR8B8Q15620 311 aa10.66□□□□□ -0.7
RETREG3-201ENST00000309428 FBXW9Q5XUX1 488 aa10.66□□□□□ -0.7
RETREG3-201ENST00000309428 TMEM178AQ8NBL3 297 aa10.66□□□□□ -0.7
RETREG3-201ENST00000309428 OR5A2Q8NGI9 324 aa10.66□□□□□ -0.7
RETREG3-201ENST00000309428 R3HDM4Q96D70 268 aa10.66□□□□□ -0.7
RETREG3-201ENST00000309428 DAZAP1Q96EP5 407 aaKnown RBP10.66□□□□□ -0.7
RETREG3-201ENST00000309428 B4E171 279 aa10.65□□□□□ -0.7
RETREG3-201ENST00000309428 CD59P13987 128 aa10.65□□□□□ -0.7
RETREG3-201ENST00000309428 SRIP30626 198 aa10.65□□□□□ -0.7
RETREG3-201ENST00000309428 ARR3P36575 388 aa10.65□□□□□ -0.7
RETREG3-201ENST00000309428 TSPAN7P41732 249 aa10.65□□□□□ -0.7
RETREG3-201ENST00000309428 BLNKQ8WV28 456 aa10.65□□□□□ -0.7
RETREG3-201ENST00000309428 C10orf35Q96D05 121 aa10.65□□□□□ -0.7
RETREG3-201ENST00000309428 S1PR3Q99500 378 aa10.65□□□□□ -0.7
RETREG3-201ENST00000309428 ZFYVE26Q68DK2 2539 aa10.65□□□□□ -0.7
RETREG3-201ENST00000309428 MALRD1Q5VYJ5 2156 aa10.65□□□□□ -0.7
RETREG3-201ENST00000309428 TRBV24-1A0A075B6N3 115 aa10.65□□□□□ -0.7
RETREG3-201ENST00000309428 IGKV1-6A0A0C4DH72 117 aa10.65□□□□□ -0.7
RETREG3-201ENST00000309428 CEACAM18A8MTB9 384 aa10.65□□□□□ -0.7
RETREG3-201ENST00000309428 M0R2Z0 102 aa10.65□□□□□ -0.7
RETREG3-201ENST00000309428 RPEL1Q2QD12 228 aa10.65□□□□□ -0.7
RETREG3-201ENST00000309428 LRRC75BQ2VPJ9 315 aa10.65□□□□□ -0.7
RETREG3-201ENST00000309428 ASPHD1Q5U4P2 390 aa10.65□□□□□ -0.7
RETREG3-201ENST00000309428 Q6ZVH6 145 aa10.65□□□□□ -0.7
RETREG3-201ENST00000309428 OR2D3Q8NGH3 330 aa10.65□□□□□ -0.7
RETREG3-201ENST00000309428 OR5R1Q8NH85 324 aa10.65□□□□□ -0.7
RETREG3-201ENST00000309428 WDYHV1Q96HA8 205 aa10.65□□□□□ -0.7
RETREG3-201ENST00000309428 P2RX4Q99571 388 aa10.65□□□□□ -0.7
RETREG3-201ENST00000309428 C2orf88Q9BSF0 95 aa10.65□□□□□ -0.7
RETREG3-201ENST00000309428 WASHC3Q9Y3C0 194 aa10.65□□□□□ -0.7
RETREG3-201ENST00000309428 CDX4O14627 284 aaPredicted RBP10.65□□□□□ -0.71
RETREG3-201ENST00000309428 MFAP2P55001 183 aa10.65□□□□□ -0.71
RETREG3-201ENST00000309428 PQLC2Q6ZP29 291 aa10.65□□□□□ -0.71
RETREG3-201ENST00000309428 ZCCHC14Q8WYQ9 949 aaKnown RBP10.65□□□□□ -0.71
RETREG3-201ENST00000309428 REPIN1Q9BWE0 567 aaKnown RBP10.65□□□□□ -0.71
RETREG3-201ENST00000309428 METRNQ9UJH8 293 aa10.65□□□□□ -0.71
RETREG3-201ENST00000309428 CENPEQ02224 2701 aa10.64□□□□□ -0.71
RETREG3-201ENST00000309428 SNAI2O43623 268 aa10.64□□□□□ -0.71
RETREG3-201ENST00000309428 IL18BPO95998 194 aa10.64□□□□□ -0.71
RETREG3-201ENST00000309428 RPL31P62899 125 aaKnown RBP10.64□□□□□ -0.71
RETREG3-201ENST00000309428 RPRMLQ8N4K4 120 aa10.64□□□□□ -0.71
RETREG3-201ENST00000309428 KLHDC1Q8N7A1 406 aa10.64□□□□□ -0.71
RETREG3-201ENST00000309428 TMEM170AQ8WVE7 144 aa10.64□□□□□ -0.71
RETREG3-201ENST00000309428 SFRP2Q96HF1 295 aa10.64□□□□□ -0.71
RETREG3-201ENST00000309428 TMEM56Q96MV1 263 aa10.64□□□□□ -0.71
RETREG3-201ENST00000309428 BET1LQ9NYM9 111 aa10.64□□□□□ -0.71
RETREG3-201ENST00000309428 PXMP4Q9Y6I8 212 aa10.64□□□□□ -0.71
RETREG3-201ENST00000309428 TMEM56-RWDD3S4R434 201 aa10.64□□□□□ -0.71
RETREG3-201ENST00000309428 TRAV24A0A0B4J272 114 aa10.64□□□□□ -0.71
RETREG3-201ENST00000309428 TMEM30CPA0ZSE6 113 aa10.64□□□□□ -0.71
RETREG3-201ENST00000309428 ODAMA1E959 279 aa10.64□□□□□ -0.71
RETREG3-201ENST00000309428 M0QZK8 103 aa10.64□□□□□ -0.71
RETREG3-201ENST00000309428 ENSAO43768 121 aaKnown RBP10.64□□□□□ -0.71
RETREG3-201ENST00000309428 GGCTO75223 188 aaKnown RBP10.64□□□□□ -0.71
RETREG3-201ENST00000309428 CRYBB3P26998 211 aa10.64□□□□□ -0.71
RETREG3-201ENST00000309428 ABLIM2Q6H8Q1 611 aa10.64□□□□□ -0.71
RETREG3-201ENST00000309428 RBMXL3Q8N7X1 1067 aaKnown RBP10.64□□□□□ -0.71
RETREG3-201ENST00000309428 KLK10O43240 276 aa10.64□□□□□ -0.71
RETREG3-201ENST00000309428 GATA2P23769 480 aaPredicted RBP10.64□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 57.1 ms