RNA–Protein interactions for RNA: ENST00000309017.7

PTPN7-201, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PTPN7, Length 3,765 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-201ENST00000309017 TMEM144Q7Z5S9 345 aa9.33□□□□□ -0.92
PTPN7-201ENST00000309017 PPP1R32Q7Z5V6 425 aa9.33□□□□□ -0.92
PTPN7-201ENST00000309017 LPAR2Q9HBW0 351 aa9.33□□□□□ -0.92
PTPN7-201ENST00000309017 WDR83OSQ9Y284 106 aa9.33□□□□□ -0.92
PTPN7-201ENST00000309017 OOEPA6NGQ2 149 aa9.33□□□□□ -0.92
PTPN7-201ENST00000309017 TMPRSS2O15393 492 aa9.33□□□□□ -0.92
PTPN7-201ENST00000309017 IGHEP01854 428 aa9.33□□□□□ -0.92
PTPN7-201ENST00000309017 PCP4P48539 62 aa9.33□□□□□ -0.92
PTPN7-201ENST00000309017 COL5A1-AS1Q5SY13 56 aa9.33□□□□□ -0.92
PTPN7-201ENST00000309017 CACNA1BQ00975 2339 aa9.32□□□□□ -0.92
PTPN7-201ENST00000309017 TRBV20OR9-2A0A075B6H5 130 aa9.32□□□□□ -0.92
PTPN7-201ENST00000309017 MGST1P10620 155 aaKnown RBP9.32□□□□□ -0.92
PTPN7-201ENST00000309017 HLA-DRB5Q30154 266 aa9.32□□□□□ -0.92
PTPN7-201ENST00000309017 ALKBH6Q3KRA9 238 aa9.32□□□□□ -0.92
PTPN7-201ENST00000309017 ABHD12Q8N2K0 398 aa9.32□□□□□ -0.92
PTPN7-201ENST00000309017 STARD4Q96DR4 205 aa9.32□□□□□ -0.92
PTPN7-201ENST00000309017 PLEKHA3Q9HB20 300 aa9.32□□□□□ -0.92
PTPN7-201ENST00000309017 C15orf62A8K5M9 175 aa9.32□□□□□ -0.92
PTPN7-201ENST00000309017 PMS2P5A8MQ11 134 aa9.32□□□□□ -0.92
PTPN7-201ENST00000309017 F2Z2F3 143 aa9.32□□□□□ -0.92
PTPN7-201ENST00000309017 RAB31Q13636 194 aa9.32□□□□□ -0.92
PTPN7-201ENST00000309017 MMD2Q8IY49 270 aa9.32□□□□□ -0.92
PTPN7-201ENST00000309017 OR2M7Q8NG81 312 aa9.32□□□□□ -0.92
PTPN7-201ENST00000309017 OR4P4Q8NGL7 312 aa9.32□□□□□ -0.92
PTPN7-201ENST00000309017 FAM173AQ9BQD7 235 aa9.32□□□□□ -0.92
PTPN7-201ENST00000309017 ENY2Q9NPA8 101 aa9.32□□□□□ -0.92
PTPN7-201ENST00000309017 IL36BQ9NZH7 164 aa9.32□□□□□ -0.92
PTPN7-201ENST00000309017 KIAA1549Q9HCM3 1950 aa9.32□□□□□ -0.92
PTPN7-201ENST00000309017 M0R1X1 148 aa9.32□□□□□ -0.92
PTPN7-201ENST00000309017 SPINT2O43291 252 aa9.32□□□□□ -0.92
PTPN7-201ENST00000309017 ZNF253O75346 499 aa9.32□□□□□ -0.92
PTPN7-201ENST00000309017 SFTPCP11686 197 aa9.32□□□□□ -0.92
PTPN7-201ENST00000309017 OR1C1Q15619 314 aa9.32□□□□□ -0.92
PTPN7-201ENST00000309017 Q6ZN92 141 aa9.32□□□□□ -0.92
PTPN7-201ENST00000309017 MS4A5Q9H3V2 200 aa9.32□□□□□ -0.92
PTPN7-201ENST00000309017 ABI3Q9P2A4 366 aa9.32□□□□□ -0.92
PTPN7-201ENST00000309017 WIPI2Q9Y4P8 454 aa9.32□□□□□ -0.92
PTPN7-201ENST00000309017 CHD8Q9HCK8 2581 aa9.31□□□□□ -0.92
PTPN7-201ENST00000309017 BRS3P32247 399 aa9.31□□□□□ -0.92
PTPN7-201ENST00000309017 LHX2P50458 406 aa9.31□□□□□ -0.92
PTPN7-201ENST00000309017 RAB7AP51149 207 aa9.31□□□□□ -0.92
PTPN7-201ENST00000309017 HNRNPA3P51991 378 aaKnown RBP9.31□□□□□ -0.92
PTPN7-201ENST00000309017 SPATA45Q537H7 98 aa9.31□□□□□ -0.92
PTPN7-201ENST00000309017 KRTCAP3Q53RY4 240 aa9.31□□□□□ -0.92
PTPN7-201ENST00000309017 DCAF12Q5T6F0 453 aa9.31□□□□□ -0.92
PTPN7-201ENST00000309017 WDR86Q86TI4 376 aa9.31□□□□□ -0.92
PTPN7-201ENST00000309017 MBNL3Q9NUK0 354 aaKnown RBP9.31□□□□□ -0.92
PTPN7-201ENST00000309017 IGKV3D-15A0A087WSY6 115 aa9.31□□□□□ -0.92
PTPN7-201ENST00000309017 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP9.31□□□□□ -0.92
PTPN7-201ENST00000309017 LINC00473A8K010 186 aa9.31□□□□□ -0.92
PTPN7-201ENST00000309017 WNT2P09544 360 aa9.31□□□□□ -0.92
PTPN7-201ENST00000309017 OR9G9P0C7N8 305 aa9.31□□□□□ -0.92
PTPN7-201ENST00000309017 FXYD3Q14802 87 aa9.31□□□□□ -0.92
PTPN7-201ENST00000309017 TPTE2P1Q5T6R2 138 aa9.31□□□□□ -0.92
PTPN7-201ENST00000309017 MRPL54Q6P161 138 aaKnown RBP9.31□□□□□ -0.92
PTPN7-201ENST00000309017 GCNT2Q8N0V5 402 aa9.31□□□□□ -0.92
PTPN7-201ENST00000309017 SLC25A40Q8TBP6 338 aa9.31□□□□□ -0.92
PTPN7-201ENST00000309017 C20orf144Q9BQM9 153 aa9.31□□□□□ -0.92
PTPN7-201ENST00000309017 LOXL2Q9Y4K0 774 aa9.31□□□□□ -0.92
PTPN7-201ENST00000309017 TBL2Q9Y4P3 447 aaKnown RBP9.31□□□□□ -0.92
PTPN7-201ENST00000309017 PPIAL4AQ9Y536 164 aa9.31□□□□□ -0.92
PTPN7-201ENST00000309017 CELA3BP08861 270 aa9.3□□□□□ -0.92
PTPN7-201ENST00000309017 GNG4P50150 75 aa9.3□□□□□ -0.92
PTPN7-201ENST00000309017 MMDQ15546 238 aa9.3□□□□□ -0.92
PTPN7-201ENST00000309017 HSD17B10Q99714 261 aaKnown RBP9.3□□□□□ -0.92
PTPN7-201ENST00000309017 OPN3Q9H1Y3 402 aaPredicted RBP9.3□□□□□ -0.92
PTPN7-201ENST00000309017 FZR1Q9UM11 496 aa9.3□□□□□ -0.92
PTPN7-201ENST00000309017 RRHO14718 337 aa9.3□□□□□ -0.92
PTPN7-201ENST00000309017 GCHFRP30047 84 aa9.3□□□□□ -0.92
PTPN7-201ENST00000309017 CHRNB4P30926 498 aa9.3□□□□□ -0.92
PTPN7-201ENST00000309017 DUSP3P51452 185 aaPredicted RBP9.3□□□□□ -0.92
PTPN7-201ENST00000309017 CLDN18P56856 261 aa9.3□□□□□ -0.92
PTPN7-201ENST00000309017 RHOBP62745 196 aa9.3□□□□□ -0.92
PTPN7-201ENST00000309017 TREML4Q6UXN2 200 aa9.3□□□□□ -0.92
PTPN7-201ENST00000309017 DCTN5Q9BTE1 182 aa9.3□□□□□ -0.92
PTPN7-201ENST00000309017 DNAJC4Q9NNZ3 241 aa9.3□□□□□ -0.92
PTPN7-201ENST00000309017 FOXJ2Q9P0K8 574 aa9.3□□□□□ -0.92
PTPN7-201ENST00000309017 CEP192Q8TEP8 1941 aa9.3□□□□□ -0.92
PTPN7-201ENST00000309017 PATE3B3GLJ2 98 aa9.3□□□□□ -0.92
PTPN7-201ENST00000309017 YPEL3P61236 119 aaPredicted RBP9.3□□□□□ -0.92
PTPN7-201ENST00000309017 ARG2P78540 354 aa9.3□□□□□ -0.92
PTPN7-201ENST00000309017 ATOH7Q8N100 152 aa9.3□□□□□ -0.92
PTPN7-201ENST00000309017 OR4B1Q8NGF8 309 aa9.3□□□□□ -0.92
PTPN7-201ENST00000309017 BORCS7Q96B45 105 aa9.3□□□□□ -0.92
PTPN7-201ENST00000309017 C5orf30Q96GV9 206 aa9.3□□□□□ -0.92
PTPN7-201ENST00000309017 LRFN3Q9BTN0 628 aa9.3□□□□□ -0.92
PTPN7-201ENST00000309017 YTHDF2Q9Y5A9 579 aaKnown RBP9.3□□□□□ -0.92
PTPN7-201ENST00000309017 DCHS1Q96JQ0 3298 aa9.3□□□□□ -0.92
PTPN7-201ENST00000309017 ADAMTS20P59510 1910 aa9.29□□□□□ -0.92
PTPN7-201ENST00000309017 OR7C2O60412 319 aa9.29□□□□□ -0.92
PTPN7-201ENST00000309017 MPDU1O75352 247 aa9.29□□□□□ -0.92
PTPN7-201ENST00000309017 FRMD6-AS1P0C7T7 363 aa9.29□□□□□ -0.92
PTPN7-201ENST00000309017 TIGITQ495A1 244 aa9.29□□□□□ -0.92
PTPN7-201ENST00000309017 SPATA31B1PQ5VZV4 182 aa9.29□□□□□ -0.92
PTPN7-201ENST00000309017 TEX43Q6ZNM6 134 aa9.29□□□□□ -0.92
PTPN7-201ENST00000309017 DOLPP1Q86YN1 238 aa9.29□□□□□ -0.92
PTPN7-201ENST00000309017 CT55Q8WUE5 264 aa9.29□□□□□ -0.92
PTPN7-201ENST00000309017 TXNDC17Q9BRA2 123 aa9.29□□□□□ -0.92
PTPN7-201ENST00000309017 DEFB127Q9H1M4 99 aa9.29□□□□□ -0.92
PTPN7-201ENST00000309017 ZNF703Q9H7S9 590 aaPredicted RBP9.29□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms