RNA–Protein interactions for RNA: ENST00000306641.1

CSPG4P1Y-201, Transcript of CSPG4 pseudogene 1 Y-linked, humanhuman

TSL 1 (best) BASIC

Gene CSPG4P1Y, Length 795 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P1Y-201ENST00000306641 OR4A5Q8NH83 315 aa8.64□□□□□ -1.03
CSPG4P1Y-201ENST00000306641 R3HDM4Q96D70 268 aa8.64□□□□□ -1.03
CSPG4P1Y-201ENST00000306641 OR4F4Q96R69 305 aa8.64□□□□□ -1.03
CSPG4P1Y-201ENST00000306641 ZNF430Q9H8G1 570 aaPredicted RBP8.64□□□□□ -1.03
CSPG4P1Y-201ENST00000306641 SLC2A8Q9NY64 477 aa8.64□□□□□ -1.03
CSPG4P1Y-201ENST00000306641 FOXA2Q9Y261 457 aaPredicted RBP8.64□□□□□ -1.03
CSPG4P1Y-201ENST00000306641 MARCH11A6NNE9 402 aa8.63□□□□□ -1.03
CSPG4P1Y-201ENST00000306641 H0Y980 276 aa8.63□□□□□ -1.03
CSPG4P1Y-201ENST00000306641 ARPC1BO15143 372 aaKnown RBP8.63□□□□□ -1.03
CSPG4P1Y-201ENST00000306641 TSPAN15O95858 294 aa8.63□□□□□ -1.03
CSPG4P1Y-201ENST00000306641 IGHG4P01861 327 aa8.63□□□□□ -1.03
CSPG4P1Y-201ENST00000306641 SERPINE2P07093 398 aa8.63□□□□□ -1.03
CSPG4P1Y-201ENST00000306641 MAS1LP35410 378 aa8.63□□□□□ -1.03
CSPG4P1Y-201ENST00000306641 LPAR6P43657 344 aa8.63□□□□□ -1.03
CSPG4P1Y-201ENST00000306641 BRWD1-AS2P59051 145 aa8.63□□□□□ -1.03
CSPG4P1Y-201ENST00000306641 RPL23AP62750 156 aaKnown RBP8.63□□□□□ -1.03
CSPG4P1Y-201ENST00000306641 CFHR3Q02985 330 aa8.63□□□□□ -1.03
CSPG4P1Y-201ENST00000306641 PJVKQ0ZLH3 352 aa8.63□□□□□ -1.03
CSPG4P1Y-201ENST00000306641 KLF9Q13886 244 aaPredicted RBP8.63□□□□□ -1.03
CSPG4P1Y-201ENST00000306641 AKIRIN2Q53H80 203 aa8.63□□□□□ -1.03
CSPG4P1Y-201ENST00000306641 PRR31Q5SQ13 230 aa8.63□□□□□ -1.03
CSPG4P1Y-201ENST00000306641 OR4A47Q6IF82 309 aa8.63□□□□□ -1.03
CSPG4P1Y-201ENST00000306641 PUSL1Q8N0Z8 303 aaKnown RBP8.63□□□□□ -1.03
CSPG4P1Y-201ENST00000306641 KLHL30-AS1Q8NEE0 82 aa8.63□□□□□ -1.03
CSPG4P1Y-201ENST00000306641 LFNGQ8NES3 379 aa8.63□□□□□ -1.03
CSPG4P1Y-201ENST00000306641 OR5M8Q8NGP6 311 aa8.63□□□□□ -1.03
CSPG4P1Y-201ENST00000306641 SRSF12Q8WXF0 261 aaKnown RBP8.63□□□□□ -1.03
CSPG4P1Y-201ENST00000306641 S100ZQ8WXG8 99 aa8.63□□□□□ -1.03
CSPG4P1Y-201ENST00000306641 TMEM68Q96MH6 324 aa8.63□□□□□ -1.03
CSPG4P1Y-201ENST00000306641 FAM212BQ9NTI7 297 aaPredicted RBP8.63□□□□□ -1.03
CSPG4P1Y-201ENST00000306641 ZFP57Q9NU63 452 aa8.63□□□□□ -1.03
CSPG4P1Y-201ENST00000306641 TMEM140Q9NV12 185 aa8.63□□□□□ -1.03
CSPG4P1Y-201ENST00000306641 BET1LQ9NYM9 111 aa8.63□□□□□ -1.03
CSPG4P1Y-201ENST00000306641 PTTG2Q9NZH5 202 aa8.63□□□□□ -1.03
CSPG4P1Y-201ENST00000306641 FBXO7Q9Y3I1 522 aa8.63□□□□□ -1.03
CSPG4P1Y-201ENST00000306641 TEX13DA0A0J9YY54 714 aaPredicted RBP8.62□□□□□ -1.03
CSPG4P1Y-201ENST00000306641 C3orf85A0A1B0GTC6 90 aa8.62□□□□□ -1.03
CSPG4P1Y-201ENST00000306641 CENPXA8MT69 81 aa8.62□□□□□ -1.03
CSPG4P1Y-201ENST00000306641 B3GALNT1O75752 331 aa8.62□□□□□ -1.03
CSPG4P1Y-201ENST00000306641 ATG12O94817 140 aa8.62□□□□□ -1.03
CSPG4P1Y-201ENST00000306641 PF4P02776 101 aa8.62□□□□□ -1.03
CSPG4P1Y-201ENST00000306641 RPLP1P05386 114 aaKnown RBP8.62□□□□□ -1.03
CSPG4P1Y-201ENST00000306641 RPA2P15927 270 aa8.62□□□□□ -1.03
CSPG4P1Y-201ENST00000306641 PPIFP30405 207 aaKnown RBP8.62□□□□□ -1.03
CSPG4P1Y-201ENST00000306641 RPL27AP46776 148 aaKnown RBP8.62□□□□□ -1.03
CSPG4P1Y-201ENST00000306641 RPL8P62917 257 aaKnown RBP8.62□□□□□ -1.03
CSPG4P1Y-201ENST00000306641 POU2AF1Q16633 256 aa8.62□□□□□ -1.03
CSPG4P1Y-201ENST00000306641 TRIM16LQ309B1 348 aa8.62□□□□□ -1.03
CSPG4P1Y-201ENST00000306641 TCTEX1D4Q5JR98 221 aa8.62□□□□□ -1.03
CSPG4P1Y-201ENST00000306641 LINC00299Q6ZSB3 139 aa8.62□□□□□ -1.03
CSPG4P1Y-201ENST00000306641 FAM110DQ8TAY7 271 aaPredicted RBP8.62□□□□□ -1.03
CSPG4P1Y-201ENST00000306641 TMEM167AQ8TBQ9 72 aa8.62□□□□□ -1.03
CSPG4P1Y-201ENST00000306641 SPIN2AQ99865 258 aa8.62□□□□□ -1.03
CSPG4P1Y-201ENST00000306641 SPIN2BQ9BPZ2 258 aa8.62□□□□□ -1.03
CSPG4P1Y-201ENST00000306641 ZNF355PQ9NSJ1 428 aa8.62□□□□□ -1.03
CSPG4P1Y-201ENST00000306641 NUBP2Q9Y5Y2 271 aa8.62□□□□□ -1.03
CSPG4P1Y-201ENST00000306641 NAP1L6A6NFF2 107 aa8.61□□□□□ -1.03
CSPG4P1Y-201ENST00000306641 MSGN1A6NI15 193 aa8.61□□□□□ -1.03
CSPG4P1Y-201ENST00000306641 SNAPC5O75971 98 aa8.61□□□□□ -1.03
CSPG4P1Y-201ENST00000306641 KRASP01116 189 aa8.61□□□□□ -1.03
CSPG4P1Y-201ENST00000306641 HLA-GP17693 338 aa8.61□□□□□ -1.03
CSPG4P1Y-201ENST00000306641 PSMB8P28062 276 aa8.61□□□□□ -1.03
CSPG4P1Y-201ENST00000306641 SLC6A1P30531 599 aa8.61□□□□□ -1.03
CSPG4P1Y-201ENST00000306641 G6PCP35575 357 aa8.61□□□□□ -1.03
CSPG4P1Y-201ENST00000306641 AKR1C2P52895 323 aa8.61□□□□□ -1.03
CSPG4P1Y-201ENST00000306641 TREML4Q6UXN2 200 aa8.61□□□□□ -1.03
CSPG4P1Y-201ENST00000306641 SLC25A42Q86VD7 318 aa8.61□□□□□ -1.03
CSPG4P1Y-201ENST00000306641 SGPP2Q8IWX5 399 aa8.61□□□□□ -1.03
CSPG4P1Y-201ENST00000306641 MINDY2Q8NBR6 621 aa8.61□□□□□ -1.03
CSPG4P1Y-201ENST00000306641 RNASE11Q8TAA1 199 aaKnown RBP8.61□□□□□ -1.03
CSPG4P1Y-201ENST00000306641 FYTTD1Q96QD9 318 aaKnown RBP8.61□□□□□ -1.03
CSPG4P1Y-201ENST00000306641 TSC22D3Q99576 134 aa8.61□□□□□ -1.03
CSPG4P1Y-201ENST00000306641 COMMD5Q9GZQ3 224 aa8.61□□□□□ -1.03
CSPG4P1Y-201ENST00000306641 NAA60Q9H7X0 242 aa8.61□□□□□ -1.03
CSPG4P1Y-201ENST00000306641 COA4Q9NYJ1 87 aa8.61□□□□□ -1.03
CSPG4P1Y-201ENST00000306641 GPR132Q9UNW8 380 aa8.61□□□□□ -1.03
CSPG4P1Y-201ENST00000306641 H3BUA1 57 aa8.6□□□□□ -1.03
CSPG4P1Y-201ENST00000306641 UPK2O00526 184 aa8.6□□□□□ -1.03
CSPG4P1Y-201ENST00000306641 IGLV1-40P01703 118 aa8.6□□□□□ -1.03
CSPG4P1Y-201ENST00000306641 APELAP0DMC3 54 aa8.6□□□□□ -1.03
CSPG4P1Y-201ENST00000306641 EGR2P11161 476 aaPredicted RBP8.6□□□□□ -1.03
CSPG4P1Y-201ENST00000306641 IL7P13232 177 aa8.6□□□□□ -1.03
CSPG4P1Y-201ENST00000306641 TPPP2P59282 170 aa8.6□□□□□ -1.03
CSPG4P1Y-201ENST00000306641 SSBP2P81877 361 aaPredicted RBP8.6□□□□□ -1.03
CSPG4P1Y-201ENST00000306641 RBMS2Q15434 407 aaKnown RBP8.6□□□□□ -1.03
CSPG4P1Y-201ENST00000306641 BAK1Q16611 211 aa8.6□□□□□ -1.03
CSPG4P1Y-201ENST00000306641 MRGPRG-AS1Q2M3A8 158 aa8.6□□□□□ -1.03
CSPG4P1Y-201ENST00000306641 ZNF585BQ52M93 769 aa8.6□□□□□ -1.03
CSPG4P1Y-201ENST00000306641 C19orf54Q5BKX5 351 aa8.6□□□□□ -1.03
CSPG4P1Y-201ENST00000306641 C10orf55Q5SWW7 151 aa8.6□□□□□ -1.03
CSPG4P1Y-201ENST00000306641 LCNL1Q6ZST4 164 aa8.6□□□□□ -1.03
CSPG4P1Y-201ENST00000306641 H2BFWTQ7Z2G1 175 aa8.6□□□□□ -1.03
CSPG4P1Y-201ENST00000306641 ZNF695Q8IW36 515 aa8.6□□□□□ -1.03
CSPG4P1Y-201ENST00000306641 RNF152Q8N8N0 203 aa8.6□□□□□ -1.03
CSPG4P1Y-201ENST00000306641 MRGPRFQ96AM1 343 aa8.6□□□□□ -1.03
CSPG4P1Y-201ENST00000306641 TP53RKQ96S44 253 aa8.6□□□□□ -1.03
CSPG4P1Y-201ENST00000306641 SLC25A21Q9BQT8 299 aaPredicted RBP8.6□□□□□ -1.03
CSPG4P1Y-201ENST00000306641 C7orf50Q9BRJ6 194 aaKnown RBP8.6□□□□□ -1.03
CSPG4P1Y-201ENST00000306641 CCDC32Q9BV29 185 aa8.6□□□□□ -1.03
CSPG4P1Y-201ENST00000306641 WDR12Q9GZL7 423 aaKnown RBP8.6□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms