RNA–Protein interactions for RNA: ENST00000306324.3

HOXD4-201, Transcript of homeobox D4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXD4, Length 1,464 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD4-201ENST00000306324 GRPEL2Q8TAA5 225 aa17.6■□□□□ 0.41
HOXD4-201ENST00000306324 FAM103A1Q9BTL3 118 aaKnown RBP17.6■□□□□ 0.41
HOXD4-201ENST00000306324 ZNF747Q9BV97 191 aa17.6■□□□□ 0.41
HOXD4-201ENST00000306324 PSMB11A5LHX3 300 aa17.59■□□□□ 0.41
HOXD4-201ENST00000306324 ACTL6BO94805 426 aa17.59■□□□□ 0.41
HOXD4-201ENST00000306324 IGF1P05019 195 aa17.59■□□□□ 0.41
HOXD4-201ENST00000306324 OR5AC1P0C628 307 aa17.59■□□□□ 0.41
HOXD4-201ENST00000306324 VDAC1P21796 283 aa17.59■□□□□ 0.41
HOXD4-201ENST00000306324 POU2AF1Q16633 256 aa17.59■□□□□ 0.41
HOXD4-201ENST00000306324 TRIM16LQ309B1 348 aa17.59■□□□□ 0.41
HOXD4-201ENST00000306324 ZNF329Q86UD4 541 aa17.59■□□□□ 0.41
HOXD4-201ENST00000306324 MMD2Q8IY49 270 aa17.59■□□□□ 0.41
HOXD4-201ENST00000306324 TMEM167AQ8TBQ9 72 aa17.59■□□□□ 0.41
HOXD4-201ENST00000306324 ARPC1AQ92747 370 aa17.59■□□□□ 0.41
HOXD4-201ENST00000306324 TMEM140Q9NV12 185 aa17.59■□□□□ 0.41
HOXD4-201ENST00000306324 BET1LQ9NYM9 111 aa17.59■□□□□ 0.41
HOXD4-201ENST00000306324 FBXO7Q9Y3I1 522 aa17.59■□□□□ 0.41
HOXD4-201ENST00000306324 WSB1Q9Y6I7 421 aa17.59■□□□□ 0.41
HOXD4-201ENST00000306324 TET2Q6N021 2002 aaPredicted RBP17.58■□□□□ 0.41
HOXD4-201ENST00000306324 ARPC1BO15143 372 aaKnown RBP17.58■□□□□ 0.41
HOXD4-201ENST00000306324 B3GALNT1O75752 331 aa17.58■□□□□ 0.41
HOXD4-201ENST00000306324 NDUFB6O95139 128 aa17.58■□□□□ 0.41
HOXD4-201ENST00000306324 SSBP2P81877 361 aaPredicted RBP17.58■□□□□ 0.41
HOXD4-201ENST00000306324 ECSCRQ19T08 205 aa17.58■□□□□ 0.41
HOXD4-201ENST00000306324 C10orf99Q6UWK7 81 aa17.58■□□□□ 0.41
HOXD4-201ENST00000306324 OR5AU1Q8NGC0 362 aa17.58■□□□□ 0.41
HOXD4-201ENST00000306324 GON7Q9BXV9 100 aa17.58■□□□□ 0.41
HOXD4-201ENST00000306324 TBC1D24Q9ULP9 559 aa17.58■□□□□ 0.41
HOXD4-201ENST00000306324 KCNIP3Q9Y2W7 256 aa17.58■□□□□ 0.41
HOXD4-201ENST00000306324 ANK2Q01484 3957 aa17.58■□□□□ 0.4
HOXD4-201ENST00000306324 G3V318 75 aa17.57■□□□□ 0.4
HOXD4-201ENST00000306324 IGKV1-39P01597 117 aa17.57■□□□□ 0.4
HOXD4-201ENST00000306324 IGKV1D-39P04432 117 aa17.57■□□□□ 0.4
HOXD4-201ENST00000306324 UCP1P25874 307 aa17.57■□□□□ 0.4
HOXD4-201ENST00000306324 SLC35B1P78383 322 aa17.57■□□□□ 0.4
HOXD4-201ENST00000306324 IFITM3Q01628 133 aa17.57■□□□□ 0.4
HOXD4-201ENST00000306324 CENPSQ8N2Z9 138 aa17.57■□□□□ 0.4
HOXD4-201ENST00000306324 OR4A5Q8NH83 315 aa17.57■□□□□ 0.4
HOXD4-201ENST00000306324 DNHD1Q96M86 4753 aa17.57■□□□□ 0.4
HOXD4-201ENST00000306324 HIST2H2BDQ6DRA6 164 aa17.56■□□□□ 0.4
HOXD4-201ENST00000306324 WIPF2Q8TF74 440 aaPredicted RBP17.56■□□□□ 0.4
HOXD4-201ENST00000306324 GLYATL2Q8WU03 294 aa17.56■□□□□ 0.4
HOXD4-201ENST00000306324 TMEM222Q9H0R3 208 aa17.56■□□□□ 0.4
HOXD4-201ENST00000306324 FLVCR2Q9UPI3 526 aa17.56■□□□□ 0.4
HOXD4-201ENST00000306324 TRAV3A0A0B4J244 114 aa17.56■□□□□ 0.4
HOXD4-201ENST00000306324 TRAV41A0A0B4J266 112 aa17.56■□□□□ 0.4
HOXD4-201ENST00000306324 FBXO24O75426 580 aa17.56■□□□□ 0.4
HOXD4-201ENST00000306324 EGR2P11161 476 aaPredicted RBP17.56■□□□□ 0.4
HOXD4-201ENST00000306324 RPL8P62917 257 aaKnown RBP17.56■□□□□ 0.4
HOXD4-201ENST00000306324 ASAH1Q13510 395 aa17.56■□□□□ 0.4
HOXD4-201ENST00000306324 TMEM128Q5BJH2 165 aa17.56■□□□□ 0.4
HOXD4-201ENST00000306324 MZT2BQ6NZ67 158 aa17.56■□□□□ 0.4
HOXD4-201ENST00000306324 SHISA2Q6UWI4 295 aa17.56■□□□□ 0.4
HOXD4-201ENST00000306324 LFNGQ8NES3 379 aa17.56■□□□□ 0.4
HOXD4-201ENST00000306324 SGMS2Q8NHU3 365 aa17.56■□□□□ 0.4
HOXD4-201ENST00000306324 SEC22AQ96IW7 307 aa17.56■□□□□ 0.4
HOXD4-201ENST00000306324 CITED1Q99966 193 aa17.56■□□□□ 0.4
HOXD4-201ENST00000306324 UPK2O00526 184 aa17.55■□□□□ 0.4
HOXD4-201ENST00000306324 CD28P10747 220 aa17.55■□□□□ 0.4
HOXD4-201ENST00000306324 AKR1C2P52895 323 aa17.55■□□□□ 0.4
HOXD4-201ENST00000306324 SUPT4H1P63272 117 aaKnown RBP17.55■□□□□ 0.4
HOXD4-201ENST00000306324 DHODHQ02127 395 aa17.55■□□□□ 0.4
HOXD4-201ENST00000306324 TMEM267Q0VDI3 215 aaPredicted RBP17.55■□□□□ 0.4
HOXD4-201ENST00000306324 C10orf55Q5SWW7 151 aa17.55■□□□□ 0.4
HOXD4-201ENST00000306324 UNQ5815/PRO19632Q6UWF5 114 aa17.55■□□□□ 0.4
HOXD4-201ENST00000306324 H2BFWTQ7Z2G1 175 aa17.55■□□□□ 0.4
HOXD4-201ENST00000306324 OR4X2Q8NGF9 303 aa17.55■□□□□ 0.4
HOXD4-201ENST00000306324 SRSF12Q8WXF0 261 aaKnown RBP17.55■□□□□ 0.4
HOXD4-201ENST00000306324 GALNT14Q96FL9 552 aa17.55■□□□□ 0.4
HOXD4-201ENST00000306324 PHB2Q99623 299 aa17.55■□□□□ 0.4
HOXD4-201ENST00000306324 ZNF580Q9UK33 172 aa17.55■□□□□ 0.4
HOXD4-201ENST00000306324 IL6RP08887 468 aaPredicted RBP17.54■□□□□ 0.4
HOXD4-201ENST00000306324 ANXA3P12429 323 aa17.54■□□□□ 0.4
HOXD4-201ENST00000306324 HLA-GP17693 338 aa17.54■□□□□ 0.4
HOXD4-201ENST00000306324 VAMP1P23763 118 aa17.54■□□□□ 0.4
HOXD4-201ENST00000306324 TSC22D3Q99576 134 aa17.54■□□□□ 0.4
HOXD4-201ENST00000306324 PRR13Q9NZ81 148 aa17.54■□□□□ 0.4
HOXD4-201ENST00000306324 NUBP2Q9Y5Y2 271 aa17.54■□□□□ 0.4
HOXD4-201ENST00000306324 FAM240BA0A1B0GVZ2 78 aa17.53■□□□□ 0.4
HOXD4-201ENST00000306324 SNAPC5O75971 98 aa17.53■□□□□ 0.4
HOXD4-201ENST00000306324 ATG12O94817 140 aa17.53■□□□□ 0.4
HOXD4-201ENST00000306324 CDS2O95674 445 aa17.53■□□□□ 0.4
HOXD4-201ENST00000306324 OPN1MWP04001 364 aa17.53■□□□□ 0.4
HOXD4-201ENST00000306324 OR9G9P0C7N8 305 aa17.53■□□□□ 0.4
HOXD4-201ENST00000306324 APELAP0DMC3 54 aa17.53■□□□□ 0.4
HOXD4-201ENST00000306324 OPN1MW2P0DN77 364 aa17.53■□□□□ 0.4
HOXD4-201ENST00000306324 OPN1MW3P0DN78 364 aa17.53■□□□□ 0.4
HOXD4-201ENST00000306324 MYOD1P15172 320 aa17.53■□□□□ 0.4
HOXD4-201ENST00000306324 SLC6A1P30531 599 aa17.53■□□□□ 0.4
HOXD4-201ENST00000306324 MAS1LP35410 378 aa17.53■□□□□ 0.4
HOXD4-201ENST00000306324 CRIP2P52943 208 aaPredicted RBP17.53■□□□□ 0.4
HOXD4-201ENST00000306324 TMEM187Q14656 261 aa17.53■□□□□ 0.4
HOXD4-201ENST00000306324 SLC25A42Q86VD7 318 aa17.53■□□□□ 0.4
HOXD4-201ENST00000306324 ZNF695Q8IW36 515 aa17.53■□□□□ 0.4
HOXD4-201ENST00000306324 RNASE11Q8TAA1 199 aaKnown RBP17.53■□□□□ 0.4
HOXD4-201ENST00000306324 LHFPL5Q8TAF8 219 aa17.53■□□□□ 0.4
HOXD4-201ENST00000306324 NSG2Q9Y328 171 aa17.53■□□□□ 0.4
HOXD4-201ENST00000306324 A0A1W2PN81 502 aa17.52■□□□□ 0.4
HOXD4-201ENST00000306324 MSGN1A6NI15 193 aa17.52■□□□□ 0.4
HOXD4-201ENST00000306324 IGKV1-5P01602 117 aa17.52■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms