RNA–Protein interactions for RNA: ENST00000302316.12

CCDC7-202, Transcript of coiled-coil domain containing 7, humanhuman

TSL 1 (best)

Gene CCDC7, Length 2,129 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-202ENST00000302316 ZDHHC16Q969W1 377 aa10.48□□□□□ -0.73
CCDC7-202ENST00000302316 SLC25A31Q9H0C2 315 aa10.48□□□□□ -0.73
CCDC7-202ENST00000302316 BET1LQ9NYM9 111 aa10.48□□□□□ -0.73
CCDC7-202ENST00000302316 NUP50Q9UKX7 468 aa10.48□□□□□ -0.73
CCDC7-202ENST00000302316 WSB1Q9Y6I7 421 aa10.48□□□□□ -0.73
CCDC7-202ENST00000302316 MINOS1-NBL1R4GNA1 71 aa10.48□□□□□ -0.73
CCDC7-202ENST00000302316 U3KQ87 197 aa10.48□□□□□ -0.73
CCDC7-202ENST00000302316 WNK2Q9Y3S1 2297 aa10.48□□□□□ -0.73
CCDC7-202ENST00000302316 IGSF23A1L1A6 192 aa10.48□□□□□ -0.73
CCDC7-202ENST00000302316 SPDEFO95238 335 aa10.48□□□□□ -0.73
CCDC7-202ENST00000302316 UBA52P62987 128 aaKnown RBP10.48□□□□□ -0.73
CCDC7-202ENST00000302316 TMEM252Q8N6L7 170 aa10.48□□□□□ -0.73
CCDC7-202ENST00000302316 DTD1Q8TEA8 209 aa10.48□□□□□ -0.73
CCDC7-202ENST00000302316 SMIM3Q9BZL3 60 aa10.48□□□□□ -0.73
CCDC7-202ENST00000302316 PSENENQ9NZ42 101 aa10.48□□□□□ -0.73
CCDC7-202ENST00000302316 FBXL17Q9UF56 701 aa10.48□□□□□ -0.73
CCDC7-202ENST00000302316 TBL2Q9Y4P3 447 aaKnown RBP10.48□□□□□ -0.73
CCDC7-202ENST00000302316 UPK2O00526 184 aa10.47□□□□□ -0.73
CCDC7-202ENST00000302316 KBTBD11O94819 623 aa10.47□□□□□ -0.73
CCDC7-202ENST00000302316 CFDP00746 253 aaPredicted RBP10.47□□□□□ -0.73
CCDC7-202ENST00000302316 PAX6P26367 422 aa10.47□□□□□ -0.73
CCDC7-202ENST00000302316 SPCS3P61009 180 aa10.47□□□□□ -0.73
CCDC7-202ENST00000302316 SSX2Q16385 188 aa10.47□□□□□ -0.73
CCDC7-202ENST00000302316 VMA21Q3ZAQ7 101 aa10.47□□□□□ -0.73
CCDC7-202ENST00000302316 ZNF429Q86V71 674 aa10.47□□□□□ -0.73
CCDC7-202ENST00000302316 PUSL1Q8N0Z8 303 aaKnown RBP10.47□□□□□ -0.73
CCDC7-202ENST00000302316 OR52E5Q8NH55 327 aa10.47□□□□□ -0.73
CCDC7-202ENST00000302316 VSTM2AQ8TAG5 236 aa10.47□□□□□ -0.73
CCDC7-202ENST00000302316 TMEM14BQ9NUH8 114 aa10.47□□□□□ -0.73
CCDC7-202ENST00000302316 PRNDQ9UKY0 176 aa10.47□□□□□ -0.73
CCDC7-202ENST00000302316 FOXA2Q9Y261 457 aaPredicted RBP10.47□□□□□ -0.73
CCDC7-202ENST00000302316 RNF223E7ERA6 249 aa10.46□□□□□ -0.73
CCDC7-202ENST00000302316 TAAR5O14804 337 aa10.46□□□□□ -0.73
CCDC7-202ENST00000302316 IGLV2-23P01705 113 aa10.46□□□□□ -0.73
CCDC7-202ENST00000302316 IL6RP08887 468 aaPredicted RBP10.46□□□□□ -0.73
CCDC7-202ENST00000302316 LGALS7P47929 136 aa10.46□□□□□ -0.73
CCDC7-202ENST00000302316 TAS2R30P59541 319 aa10.46□□□□□ -0.73
CCDC7-202ENST00000302316 NHLH2Q02577 135 aa10.46□□□□□ -0.73
CCDC7-202ENST00000302316 CCDC144NLQ6NUI1 221 aa10.46□□□□□ -0.73
CCDC7-202ENST00000302316 ZNF767PQ75MW2 155 aa10.46□□□□□ -0.73
CCDC7-202ENST00000302316 ZNF680Q8NEM1 530 aa10.46□□□□□ -0.73
CCDC7-202ENST00000302316 ST8SIA2Q92186 375 aa10.46□□□□□ -0.73
CCDC7-202ENST00000302316 BSCL2Q96G97 398 aaPredicted RBP10.46□□□□□ -0.73
CCDC7-202ENST00000302316 SMIM8Q96KF7 97 aa10.46□□□□□ -0.73
CCDC7-202ENST00000302316 CIB3Q96Q77 187 aaPredicted RBP10.46□□□□□ -0.73
CCDC7-202ENST00000302316 HIF1ANQ9NWT6 349 aa10.46□□□□□ -0.73
CCDC7-202ENST00000302316 CACFD1Q9UGQ2 172 aa10.46□□□□□ -0.73
CCDC7-202ENST00000302316 AUP1Q9Y679 476 aa10.46□□□□□ -0.73
CCDC7-202ENST00000302316 NBPF19A0A087WUL8 3843 aa10.46□□□□□ -0.73
CCDC7-202ENST00000302316 MAP1AP78559 2803 aaPredicted RBP10.46□□□□□ -0.74
CCDC7-202ENST00000302316 OOSP1A8MZH6 123 aa10.46□□□□□ -0.74
CCDC7-202ENST00000302316 SLC25A17O43808 307 aa10.46□□□□□ -0.74
CCDC7-202ENST00000302316 CST7O76096 145 aa10.46□□□□□ -0.74
CCDC7-202ENST00000302316 IFNA7P01567 189 aa10.46□□□□□ -0.74
CCDC7-202ENST00000302316 BAXQ07812 192 aa10.46□□□□□ -0.74
CCDC7-202ENST00000302316 LOXL1Q08397 574 aaPredicted RBP10.46□□□□□ -0.74
CCDC7-202ENST00000302316 TMEM267Q0VDI3 215 aaPredicted RBP10.46□□□□□ -0.74
CCDC7-202ENST00000302316 EXOSC2Q13868 293 aaKnown RBP10.46□□□□□ -0.74
CCDC7-202ENST00000302316 SPANXN5Q5MJ07 72 aa10.46□□□□□ -0.74
CCDC7-202ENST00000302316 STX12Q86Y82 276 aa10.46□□□□□ -0.74
CCDC7-202ENST00000302316 LINC01356Q8N9X3 169 aa10.46□□□□□ -0.74
CCDC7-202ENST00000302316 MAPK1IP1LQ8NDC0 245 aa10.46□□□□□ -0.74
CCDC7-202ENST00000302316 C17orf50Q8WW18 174 aa10.46□□□□□ -0.74
CCDC7-202ENST00000302316 CFHR4Q92496 578 aa10.46□□□□□ -0.74
CCDC7-202ENST00000302316 C1orf159Q96HA4 380 aa10.46□□□□□ -0.74
CCDC7-202ENST00000302316 RITA1Q96K30 269 aa10.46□□□□□ -0.74
CCDC7-202ENST00000302316 Q96MF0 132 aa10.46□□□□□ -0.74
CCDC7-202ENST00000302316 CYTL1Q9NRR1 136 aa10.46□□□□□ -0.74
CCDC7-202ENST00000302316 TCF19Q9Y242 345 aa10.46□□□□□ -0.74
CCDC7-202ENST00000302316 OR51B2Q9Y5P1 312 aa10.46□□□□□ -0.74
CCDC7-202ENST00000302316 TRAV20A0A0B4J274 112 aa10.45□□□□□ -0.74
CCDC7-202ENST00000302316 CENPVL3A0A0U1RRI6 287 aa10.45□□□□□ -0.74
CCDC7-202ENST00000302316 VENTXO95231 258 aa10.45□□□□□ -0.74
CCDC7-202ENST00000302316 CD1BP29016 333 aa10.45□□□□□ -0.74
CCDC7-202ENST00000302316 SAA4P35542 130 aa10.45□□□□□ -0.74
CCDC7-202ENST00000302316 HOXA1P49639 335 aaPredicted RBP10.45□□□□□ -0.74
CCDC7-202ENST00000302316 DYNAPQ8N1N2 210 aa10.45□□□□□ -0.74
CCDC7-202ENST00000302316 OR4A5Q8NH83 315 aa10.45□□□□□ -0.74
CCDC7-202ENST00000302316 CLCC1Q96S66 551 aa10.45□□□□□ -0.74
CCDC7-202ENST00000302316 TSNAXQ99598 290 aaKnown RBP10.45□□□□□ -0.74
CCDC7-202ENST00000302316 REG4Q9BYZ8 158 aa10.45□□□□□ -0.74
CCDC7-202ENST00000302316 PAIP2BQ9ULR5 123 aaKnown RBP10.45□□□□□ -0.74
CCDC7-202ENST00000302316 TRAV40A0A0B4J280 105 aa10.45□□□□□ -0.74
CCDC7-202ENST00000302316 NPFFO15130 113 aa10.45□□□□□ -0.74
CCDC7-202ENST00000302316 MYOD1P15172 320 aa10.45□□□□□ -0.74
CCDC7-202ENST00000302316 HSPE1P61604 102 aaKnown RBP10.45□□□□□ -0.74
CCDC7-202ENST00000302316 HABP2Q14520 560 aaPredicted RBP10.45□□□□□ -0.74
CCDC7-202ENST00000302316 PDLIM3Q53GG5 364 aaPredicted RBP10.45□□□□□ -0.74
CCDC7-202ENST00000302316 PRSS57Q6UWY2 283 aa10.45□□□□□ -0.74
CCDC7-202ENST00000302316 TMEM217Q8N7C4 229 aa10.45□□□□□ -0.74
CCDC7-202ENST00000302316 TMEM167AQ8TBQ9 72 aa10.45□□□□□ -0.74
CCDC7-202ENST00000302316 C7orf69Q9H7B7 122 aa10.45□□□□□ -0.74
CCDC7-202ENST00000302316 IGKV1D-33P01593 117 aa10.44□□□□□ -0.74
CCDC7-202ENST00000302316 IGKV1-33P01594 117 aa10.44□□□□□ -0.74
CCDC7-202ENST00000302316 FGF2P09038 288 aa10.44□□□□□ -0.74
CCDC7-202ENST00000302316 METTL15P1P0C7V9 234 aa10.44□□□□□ -0.74
CCDC7-202ENST00000302316 TPT1P13693 172 aaKnown RBP10.44□□□□□ -0.74
CCDC7-202ENST00000302316 CNTFRP26992 372 aa10.44□□□□□ -0.74
CCDC7-202ENST00000302316 SULT1A1P50225 295 aa10.44□□□□□ -0.74
CCDC7-202ENST00000302316 RPL8P62917 257 aaKnown RBP10.44□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms