RNA–Protein interactions for RNA: ENST00000302303.5

RFX3-201, Transcript of regulatory factor X3, humanhuman

TSL 1 (best) BASIC

Gene RFX3, Length 1,522 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX3-201ENST00000302303 FBN1P35555 2871 aaKnown RBP7.51□□□□□ -1.21
RFX3-201ENST00000302303 PLXNB1O43157 2135 aa7.51□□□□□ -1.21
RFX3-201ENST00000302303 FAM181BA6NEQ2 426 aa7.51□□□□□ -1.21
RFX3-201ENST00000302303 UPK2O00526 184 aa7.51□□□□□ -1.21
RFX3-201ENST00000302303 FGF16O43320 207 aa7.51□□□□□ -1.21
RFX3-201ENST00000302303 PITX3O75364 302 aa7.51□□□□□ -1.21
RFX3-201ENST00000302303 SPDEFO95238 335 aa7.51□□□□□ -1.21
RFX3-201ENST00000302303 DHFRP00374 187 aa7.51□□□□□ -1.21
RFX3-201ENST00000302303 HRASP01112 189 aa7.51□□□□□ -1.21
RFX3-201ENST00000302303 HLA-GP17693 338 aa7.51□□□□□ -1.21
RFX3-201ENST00000302303 NDPQ00604 133 aa7.51□□□□□ -1.21
RFX3-201ENST00000302303 SCGB2A2Q13296 93 aa7.51□□□□□ -1.21
RFX3-201ENST00000302303 AARDQ4LEZ3 155 aa7.51□□□□□ -1.21
RFX3-201ENST00000302303 C16orf82Q7Z2V1 217 aa7.51□□□□□ -1.21
RFX3-201ENST00000302303 PPP1R27Q86WC6 154 aa7.51□□□□□ -1.21
RFX3-201ENST00000302303 LGI3Q8N145 548 aa7.51□□□□□ -1.21
RFX3-201ENST00000302303 ZNF418Q8TF45 676 aaPredicted RBP7.51□□□□□ -1.21
RFX3-201ENST00000302303 LSM10Q969L4 123 aaKnown RBP7.51□□□□□ -1.21
RFX3-201ENST00000302303 WDR89Q96FK6 387 aaPredicted RBP7.51□□□□□ -1.21
RFX3-201ENST00000302303 TSNAXQ99598 290 aaKnown RBP7.51□□□□□ -1.21
RFX3-201ENST00000302303 HSPB9Q9BQS6 159 aa7.51□□□□□ -1.21
RFX3-201ENST00000302303 TMEM140Q9NV12 185 aa7.51□□□□□ -1.21
RFX3-201ENST00000302303 METTL1Q9UBP6 276 aaKnown RBP7.51□□□□□ -1.21
RFX3-201ENST00000302303 PITPNC1Q9UKF7 332 aa7.51□□□□□ -1.21
RFX3-201ENST00000302303 NSG2Q9Y328 171 aa7.51□□□□□ -1.21
RFX3-201ENST00000302303 MOB4Q9Y3A3 225 aa7.51□□□□□ -1.21
RFX3-201ENST00000302303 FBXO7Q9Y3I1 522 aa7.51□□□□□ -1.21
RFX3-201ENST00000302303 TNCP24821 2201 aa7.51□□□□□ -1.21
RFX3-201ENST00000302303 IGHV7-81A0A0B4J1V7 117 aa7.5□□□□□ -1.21
RFX3-201ENST00000302303 A0A1B0GVG6 124 aa7.5□□□□□ -1.21
RFX3-201ENST00000302303 NCBP2LA6PVI3 153 aaKnown RBP7.5□□□□□ -1.21
RFX3-201ENST00000302303 KBTBD11O94819 623 aa7.5□□□□□ -1.21
RFX3-201ENST00000302303 OR2A4O95047 310 aa7.5□□□□□ -1.21
RFX3-201ENST00000302303 VDAC1P21796 283 aa7.5□□□□□ -1.21
RFX3-201ENST00000302303 IL15RAQ13261 267 aa7.5□□□□□ -1.21
RFX3-201ENST00000302303 PRSS8Q16651 343 aa7.5□□□□□ -1.21
RFX3-201ENST00000302303 GGNBP1Q5YKI7 109 aa7.5□□□□□ -1.21
RFX3-201ENST00000302303 RBMS3Q6XE24 437 aaKnown RBP7.5□□□□□ -1.21
RFX3-201ENST00000302303 ZNF695Q8IW36 515 aa7.5□□□□□ -1.21
RFX3-201ENST00000302303 Q8N2B8 174 aa7.5□□□□□ -1.21
RFX3-201ENST00000302303 C12orf45Q8N5I9 185 aaPredicted RBP7.5□□□□□ -1.21
RFX3-201ENST00000302303 OR10C1Q96KK4 312 aa7.5□□□□□ -1.21
RFX3-201ENST00000302303 OR2A7Q96R45 310 aa7.5□□□□□ -1.21
RFX3-201ENST00000302303 ZNF430Q9H8G1 570 aaPredicted RBP7.5□□□□□ -1.21
RFX3-201ENST00000302303 ZNF702PQ9H963 129 aa7.5□□□□□ -1.21
RFX3-201ENST00000302303 MMP24Q9Y5R2 645 aa7.5□□□□□ -1.21
RFX3-201ENST00000302303 SETD2Q9BYW2 2564 aaPredicted RBP7.49□□□□□ -1.21
RFX3-201ENST00000302303 CCSO14618 274 aa7.49□□□□□ -1.21
RFX3-201ENST00000302303 TCF21O43680 179 aa7.49□□□□□ -1.21
RFX3-201ENST00000302303 HLA-DRB1P01911 266 aa7.49□□□□□ -1.21
RFX3-201ENST00000302303 HOXB5P09067 269 aa7.49□□□□□ -1.21
RFX3-201ENST00000302303 ANXA3P12429 323 aa7.49□□□□□ -1.21
RFX3-201ENST00000302303 CX3CL1P78423 397 aa7.49□□□□□ -1.21
RFX3-201ENST00000302303 CBX3Q13185 183 aa7.49□□□□□ -1.21
RFX3-201ENST00000302303 C10orf55Q5SWW7 151 aa7.49□□□□□ -1.21
RFX3-201ENST00000302303 ZNF562Q6V9R5 426 aa7.49□□□□□ -1.21
RFX3-201ENST00000302303 DMBX1Q8NFW5 382 aa7.49□□□□□ -1.21
RFX3-201ENST00000302303 CLCC1Q96S66 551 aa7.49□□□□□ -1.21
RFX3-201ENST00000302303 PHB2Q99623 299 aa7.49□□□□□ -1.21
RFX3-201ENST00000302303 OR51J1Q9H342 316 aa7.49□□□□□ -1.21
RFX3-201ENST00000302303 TMEM14BQ9NUH8 114 aa7.49□□□□□ -1.21
RFX3-201ENST00000302303 C1RLQ9NZP8 487 aa7.49□□□□□ -1.21
RFX3-201ENST00000302303 TEX50A0A1B0GTY4 177 aa7.48□□□□□ -1.21
RFX3-201ENST00000302303 DUXBA0A1W2PPF3 345 aa7.48□□□□□ -1.21
RFX3-201ENST00000302303 CREBL2O60519 120 aaPredicted RBP7.48□□□□□ -1.21
RFX3-201ENST00000302303 TSPAN9O75954 239 aa7.48□□□□□ -1.21
RFX3-201ENST00000302303 CA2P00918 260 aa7.48□□□□□ -1.21
RFX3-201ENST00000302303 IGHG2P01859 326 aa7.48□□□□□ -1.21
RFX3-201ENST00000302303 FGF2P09038 288 aa7.48□□□□□ -1.21
RFX3-201ENST00000302303 CXCL3P19876 107 aa7.48□□□□□ -1.21
RFX3-201ENST00000302303 H2BFSP57053 126 aa7.48□□□□□ -1.21
RFX3-201ENST00000302303 SRPXP78539 464 aa7.48□□□□□ -1.21
RFX3-201ENST00000302303 VMA21Q3ZAQ7 101 aa7.48□□□□□ -1.21
RFX3-201ENST00000302303 C19orf54Q5BKX5 351 aa7.48□□□□□ -1.21
RFX3-201ENST00000302303 ASPHD1Q5U4P2 390 aa7.48□□□□□ -1.21
RFX3-201ENST00000302303 Q6ZSV7 163 aa7.48□□□□□ -1.21
RFX3-201ENST00000302303 H2BFWTQ7Z2G1 175 aa7.48□□□□□ -1.21
RFX3-201ENST00000302303 OR11H7Q8NGC8 314 aa7.48□□□□□ -1.21
RFX3-201ENST00000302303 OR4A5Q8NH83 315 aa7.48□□□□□ -1.21
RFX3-201ENST00000302303 COQ8AQ8NI60 647 aa7.48□□□□□ -1.21
RFX3-201ENST00000302303 RANBP3Q9H6Z4 567 aaPredicted RBP7.48□□□□□ -1.21
RFX3-201ENST00000302303 GPN1Q9HCN4 374 aaPredicted RBP7.48□□□□□ -1.21
RFX3-201ENST00000302303 RAB18Q9NP72 206 aa7.48□□□□□ -1.21
RFX3-201ENST00000302303 SERTAD4Q9NUC0 356 aa7.48□□□□□ -1.21
RFX3-201ENST00000302303 TMED3Q9Y3Q3 217 aa7.48□□□□□ -1.21
RFX3-201ENST00000302303 TET2Q6N021 2002 aaPredicted RBP7.48□□□□□ -1.21
RFX3-201ENST00000302303 BTBD17A6NE02 478 aa7.47□□□□□ -1.21
RFX3-201ENST00000302303 C15orf61A6NNL5 157 aa7.47□□□□□ -1.21
RFX3-201ENST00000302303 TEX22C9J3V5 150 aa7.47□□□□□ -1.21
RFX3-201ENST00000302303 M0QZK8 103 aa7.47□□□□□ -1.21
RFX3-201ENST00000302303 SIX6O95475 246 aa7.47□□□□□ -1.21
RFX3-201ENST00000302303 SULT1A3P0DMM9 295 aa7.47□□□□□ -1.21
RFX3-201ENST00000302303 SULT1A4P0DMN0 295 aa7.47□□□□□ -1.21
RFX3-201ENST00000302303 SLC25A6P12236 298 aa7.47□□□□□ -1.21
RFX3-201ENST00000302303 COMPP49747 757 aaPredicted RBP7.47□□□□□ -1.21
RFX3-201ENST00000302303 OR2B8PP59922 312 aa7.47□□□□□ -1.21
RFX3-201ENST00000302303 RPL8P62917 257 aaKnown RBP7.47□□□□□ -1.21
RFX3-201ENST00000302303 PDLIM3Q53GG5 364 aaPredicted RBP7.47□□□□□ -1.21
RFX3-201ENST00000302303 C11orf87Q6NUJ2 197 aa7.47□□□□□ -1.21
RFX3-201ENST00000302303 ZNF429Q86V71 674 aa7.47□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 72.8 ms