RNA–Protein interactions for RNA: ENST00000300648.6

GCN1-201, Transcript of GCN1, eIF2 alpha kinase activator homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GCN1, Length 8,675 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCN1-201ENST00000300648 CENPWQ5EE01 88 aa9.72□□□□□ -0.85
GCN1-201ENST00000300648 FGFRL1Q8N441 504 aa9.72□□□□□ -0.85
GCN1-201ENST00000300648 POC1AQ8NBT0 407 aa9.72□□□□□ -0.85
GCN1-201ENST00000300648 MGST2Q99735 147 aa9.72□□□□□ -0.85
GCN1-201ENST00000300648 NDUFAF3Q9BU61 184 aa9.72□□□□□ -0.85
GCN1-201ENST00000300648 GSN-AS1Q9NRJ2 163 aa9.72□□□□□ -0.85
GCN1-201ENST00000300648 TBL2Q9Y4P3 447 aaKnown RBP9.72□□□□□ -0.85
GCN1-201ENST00000300648 EFNB1P98172 346 aa9.72□□□□□ -0.85
GCN1-201ENST00000300648 RUNX1Q01196 453 aa9.72□□□□□ -0.85
GCN1-201ENST00000300648 DMRTC1Q5HYR2 192 aa9.72□□□□□ -0.85
GCN1-201ENST00000300648 DERL1Q9BUN8 251 aa9.72□□□□□ -0.85
GCN1-201ENST00000300648 SSBP4Q9BWG4 385 aaPredicted RBP9.72□□□□□ -0.85
GCN1-201ENST00000300648 FOXQ1Q9C009 403 aa9.72□□□□□ -0.85
GCN1-201ENST00000300648 H0YL77 283 aa9.72□□□□□ -0.85
GCN1-201ENST00000300648 CACNG8Q8WXS5 425 aa9.72□□□□□ -0.85
GCN1-201ENST00000300648 GPR146Q96CH1 333 aa9.72□□□□□ -0.85
GCN1-201ENST00000300648 Q96M66 194 aa9.72□□□□□ -0.85
GCN1-201ENST00000300648 OVOL2Q9BRP0 275 aa9.72□□□□□ -0.85
GCN1-201ENST00000300648 SPCS1Q9Y6A9 102 aa9.72□□□□□ -0.85
GCN1-201ENST00000300648 SLC25A20O43772 301 aa9.71□□□□□ -0.85
GCN1-201ENST00000300648 PGLYRP1O75594 196 aaPredicted RBP9.71□□□□□ -0.85
GCN1-201ENST00000300648 CTAG1AP78358 180 aa9.71□□□□□ -0.85
GCN1-201ENST00000300648 ORMDL3Q8N138 153 aa9.71□□□□□ -0.85
GCN1-201ENST00000300648 FSCN3Q9NQT6 498 aa9.71□□□□□ -0.85
GCN1-201ENST00000300648 NANOS3P60323 173 aaKnown RBP9.71□□□□□ -0.85
GCN1-201ENST00000300648 ARFGEF3Q5TH69 2177 aa9.71□□□□□ -0.85
GCN1-201ENST00000300648 F12P00748 615 aaPredicted RBP9.71□□□□□ -0.85
GCN1-201ENST00000300648 EFNB2P52799 333 aa9.71□□□□□ -0.85
GCN1-201ENST00000300648 TIMP4Q99727 224 aa9.71□□□□□ -0.85
GCN1-201ENST00000300648 TRAV39A0A0B4J263 110 aa9.71□□□□□ -0.85
GCN1-201ENST00000300648 NRN1LQ496H8 165 aa9.71□□□□□ -0.85
GCN1-201ENST00000300648 HDHD3Q9BSH5 251 aaPredicted RBP9.71□□□□□ -0.85
GCN1-201ENST00000300648 CCL2P13500 99 aa9.71□□□□□ -0.86
GCN1-201ENST00000300648 G6PC2Q9NQR9 355 aa9.71□□□□□ -0.86
GCN1-201ENST00000300648 TMSB15BA0A087X1C1 80 aa9.71□□□□□ -0.86
GCN1-201ENST00000300648 PGPA6NDG6 321 aa9.71□□□□□ -0.86
GCN1-201ENST00000300648 UNQ9370/PRO34162Q6UXP9 181 aa9.71□□□□□ -0.86
GCN1-201ENST00000300648 TRBV20OR9-2A0A075B6H5 130 aa9.71□□□□□ -0.86
GCN1-201ENST00000300648 TM4SF5O14894 197 aa9.71□□□□□ -0.86
GCN1-201ENST00000300648 GUSBP11Q6P575 273 aa9.71□□□□□ -0.86
GCN1-201ENST00000300648 ST20Q9HBF5 79 aa9.71□□□□□ -0.86
GCN1-201ENST00000300648 GPX1P07203 203 aa9.7□□□□□ -0.86
GCN1-201ENST00000300648 SRSF12Q8WXF0 261 aaKnown RBP9.7□□□□□ -0.86
GCN1-201ENST00000300648 EEF1AKMT3Q96AZ1 226 aa9.7□□□□□ -0.86
GCN1-201ENST00000300648 TMEM242Q9NWH2 141 aa9.7□□□□□ -0.86
GCN1-201ENST00000300648 AHRRA9YTQ3 701 aa9.7□□□□□ -0.86
GCN1-201ENST00000300648 H2BFSP57053 126 aa9.7□□□□□ -0.86
GCN1-201ENST00000300648 SUMO2P61956 95 aaKnown RBP9.7□□□□□ -0.86
GCN1-201ENST00000300648 FAM159AQ6UWV7 190 aa9.7□□□□□ -0.86
GCN1-201ENST00000300648 AURKAIP1Q9NWT8 199 aaPredicted RBP9.7□□□□□ -0.86
GCN1-201ENST00000300648 PLA2G3Q9NZ20 509 aa9.7□□□□□ -0.86
GCN1-201ENST00000300648 TBR1Q16650 682 aa9.7□□□□□ -0.86
GCN1-201ENST00000300648 CT55Q8WUE5 264 aa9.7□□□□□ -0.86
GCN1-201ENST00000300648 PRR13Q9NZ81 148 aa9.7□□□□□ -0.86
GCN1-201ENST00000300648 SMPXQ9UHP9 88 aa9.7□□□□□ -0.86
GCN1-201ENST00000300648 NPFFO15130 113 aa9.7□□□□□ -0.86
GCN1-201ENST00000300648 OR4D11Q8NGI4 311 aa9.7□□□□□ -0.86
GCN1-201ENST00000300648 SOSTQ9BQB4 213 aa9.7□□□□□ -0.86
GCN1-201ENST00000300648 MYEOVQ96EZ4 313 aa9.7□□□□□ -0.86
GCN1-201ENST00000300648 TSPAN2O60636 221 aa9.7□□□□□ -0.86
GCN1-201ENST00000300648 OR2H2O95918 312 aa9.7□□□□□ -0.86
GCN1-201ENST00000300648 S100A7L2Q5SY68 101 aa9.7□□□□□ -0.86
GCN1-201ENST00000300648 MIC13Q5XKP0 118 aa9.7□□□□□ -0.86
GCN1-201ENST00000300648 PRSS41Q7RTY9 318 aa9.7□□□□□ -0.86
GCN1-201ENST00000300648 ZNF488Q96MN9 340 aa9.7□□□□□ -0.86
GCN1-201ENST00000300648 SPANXCQ9NY87 97 aa9.7□□□□□ -0.86
GCN1-201ENST00000300648 PHF3Q92576 2039 aaKnown RBP9.7□□□□□ -0.86
GCN1-201ENST00000300648 hCG_38984A0A1B0GV85 526 aa9.7□□□□□ -0.86
GCN1-201ENST00000300648 PRKNO60260 465 aaPredicted RBP9.7□□□□□ -0.86
GCN1-201ENST00000300648 CA1P00915 261 aaPredicted RBP9.7□□□□□ -0.86
GCN1-201ENST00000300648 HTN1P15515 57 aa9.7□□□□□ -0.86
GCN1-201ENST00000300648 GCHFRP30047 84 aa9.7□□□□□ -0.86
GCN1-201ENST00000300648 PIMREGQ9BSJ6 248 aa9.7□□□□□ -0.86
GCN1-201ENST00000300648 MBNL2Q5VZF2 373 aaKnown RBP9.69□□□□□ -0.86
GCN1-201ENST00000300648 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP9.69□□□□□ -0.86
GCN1-201ENST00000300648 ERGP11308 486 aa9.69□□□□□ -0.86
GCN1-201ENST00000300648 PLNP26678 52 aa9.69□□□□□ -0.86
GCN1-201ENST00000300648 GPR6P46095 362 aaPredicted RBP9.69□□□□□ -0.86
GCN1-201ENST00000300648 ZNF56Q15929 161 aa9.69□□□□□ -0.86
GCN1-201ENST00000300648 RNASEH2CQ8TDP1 164 aaKnown RBP9.69□□□□□ -0.86
GCN1-201ENST00000300648 DRD3P35462 400 aa9.69□□□□□ -0.86
GCN1-201ENST00000300648 FAM90A1Q86YD7 464 aa9.69□□□□□ -0.86
GCN1-201ENST00000300648 ZNF721Q8TF20 911 aa9.69□□□□□ -0.86
GCN1-201ENST00000300648 CITED2Q99967 270 aaPredicted RBP9.69□□□□□ -0.86
GCN1-201ENST00000300648 NPCDR1Q9BY65 106 aa9.69□□□□□ -0.86
GCN1-201ENST00000300648 PLAC1Q9HBJ0 212 aa9.69□□□□□ -0.86
GCN1-201ENST00000300648 UCP2P55851 309 aa9.69□□□□□ -0.86
GCN1-201ENST00000300648 OR10J3Q5JRS4 329 aa9.69□□□□□ -0.86
GCN1-201ENST00000300648 OSR1Q8TAX0 266 aaPredicted RBP9.69□□□□□ -0.86
GCN1-201ENST00000300648 CHCHD1Q96BP2 118 aaKnown RBP9.69□□□□□ -0.86
GCN1-201ENST00000300648 KCNK17Q96T54 332 aa9.69□□□□□ -0.86
GCN1-201ENST00000300648 BRWD3Q6RI45 1802 aa9.69□□□□□ -0.86
GCN1-201ENST00000300648 WISP3O95389 354 aaPredicted RBP9.69□□□□□ -0.86
GCN1-201ENST00000300648 RNFT1Q5M7Z0 435 aa9.69□□□□□ -0.86
GCN1-201ENST00000300648 SPINK14Q6IE38 97 aa9.69□□□□□ -0.86
GCN1-201ENST00000300648 SMRP1Q8NCR6 262 aa9.69□□□□□ -0.86
GCN1-201ENST00000300648 F11RQ9Y624 299 aaKnown RBP9.69□□□□□ -0.86
GCN1-201ENST00000300648 FTH1P19P0C7X4 201 aa9.69□□□□□ -0.86
GCN1-201ENST00000300648 TMEM187Q14656 261 aa9.69□□□□□ -0.86
GCN1-201ENST00000300648 ZNF324BQ6AW86 544 aaPredicted RBP9.69□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms