RNA–Protein interactions for RNA: ENST00000295226.1

CCDC140-201, Transcript of coiled-coil domain containing 140, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC140, Length 1,699 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC140-201ENST00000295226 SNRNP70P08621 437 aaKnown RBP12.16□□□□□ -0.46
CCDC140-201ENST00000295226 HOXB5P09067 269 aa12.16□□□□□ -0.46
CCDC140-201ENST00000295226 TPT1P13693 172 aaKnown RBP12.16□□□□□ -0.46
CCDC140-201ENST00000295226 SRD5A1P18405 259 aa12.16□□□□□ -0.46
CCDC140-201ENST00000295226 TMEM187Q14656 261 aa12.16□□□□□ -0.46
CCDC140-201ENST00000295226 ZNF585BQ52M93 769 aa12.16□□□□□ -0.46
CCDC140-201ENST00000295226 LIAT1Q6ZQX7 453 aa12.16□□□□□ -0.46
CCDC140-201ENST00000295226 SIGLECL1Q8N7X8 197 aa12.16□□□□□ -0.46
CCDC140-201ENST00000295226 ZDHHC16Q969W1 377 aa12.16□□□□□ -0.46
CCDC140-201ENST00000295226 CDC42EP3Q9UKI2 254 aa12.16□□□□□ -0.46
CCDC140-201ENST00000295226 TXNL1O43396 289 aa12.15□□□□□ -0.46
CCDC140-201ENST00000295226 VENTXO95231 258 aa12.15□□□□□ -0.46
CCDC140-201ENST00000295226 CRYZL1O95825 349 aa12.15□□□□□ -0.46
CCDC140-201ENST00000295226 IGKV1D-33P01593 117 aa12.15□□□□□ -0.46
CCDC140-201ENST00000295226 IGKV1-33P01594 117 aa12.15□□□□□ -0.46
CCDC140-201ENST00000295226 CATR1Q13166 79 aa12.15□□□□□ -0.46
CCDC140-201ENST00000295226 HES1Q14469 280 aa12.15□□□□□ -0.46
CCDC140-201ENST00000295226 LY6EQ16553 131 aa12.15□□□□□ -0.46
CCDC140-201ENST00000295226 AANATQ16613 207 aa12.15□□□□□ -0.46
CCDC140-201ENST00000295226 IAH1Q2TAA2 248 aaPredicted RBP12.15□□□□□ -0.46
CCDC140-201ENST00000295226 CCDC28AQ8IWP9 274 aa12.15□□□□□ -0.46
CCDC140-201ENST00000295226 ADTRPQ96IZ2 230 aa12.15□□□□□ -0.46
CCDC140-201ENST00000295226 OR10C1Q96KK4 312 aa12.15□□□□□ -0.46
CCDC140-201ENST00000295226 DUX5Q96PT3 197 aa12.15□□□□□ -0.46
CCDC140-201ENST00000295226 PRELID3BQ9Y3B1 194 aa12.15□□□□□ -0.46
CCDC140-201ENST00000295226 TMED3Q9Y3Q3 217 aa12.15□□□□□ -0.46
CCDC140-201ENST00000295226 RNF212BA8MTL3 300 aa12.14□□□□□ -0.47
CCDC140-201ENST00000295226 H3BUX3 64 aa12.14□□□□□ -0.47
CCDC140-201ENST00000295226 SHOXO15266 292 aa12.14□□□□□ -0.47
CCDC140-201ENST00000295226 IGHV4-59P01825 116 aa12.14□□□□□ -0.47
CCDC140-201ENST00000295226 APOA2P02652 100 aa12.14□□□□□ -0.47
CCDC140-201ENST00000295226 CNTFRP26992 372 aa12.14□□□□□ -0.47
CCDC140-201ENST00000295226 LPAR6P43657 344 aa12.14□□□□□ -0.47
CCDC140-201ENST00000295226 LRRC75BQ2VPJ9 315 aa12.14□□□□□ -0.47
CCDC140-201ENST00000295226 TOR2AQ5JU69 321 aa12.14□□□□□ -0.47
CCDC140-201ENST00000295226 GGNBP1Q5YKI7 109 aa12.14□□□□□ -0.47
CCDC140-201ENST00000295226 EIF4E3Q8N5X7 224 aaKnown RBP12.14□□□□□ -0.47
CCDC140-201ENST00000295226 RBPMSQ93062 196 aaKnown RBP12.14□□□□□ -0.47
CCDC140-201ENST00000295226 WASHC3Q9Y3C0 194 aa12.14□□□□□ -0.47
CCDC140-201ENST00000295226 DUXBA0A1W2PPF3 345 aa12.13□□□□□ -0.47
CCDC140-201ENST00000295226 I3L521 148 aa12.13□□□□□ -0.47
CCDC140-201ENST00000295226 S1PR2O95136 353 aa12.13□□□□□ -0.47
CCDC140-201ENST00000295226 CD1BP29016 333 aa12.13□□□□□ -0.47
CCDC140-201ENST00000295226 RAB32Q13637 225 aa12.13□□□□□ -0.47
CCDC140-201ENST00000295226 HABP2Q14520 560 aaPredicted RBP12.13□□□□□ -0.47
CCDC140-201ENST00000295226 EIF5AL1Q6IS14 154 aaKnown RBP12.13□□□□□ -0.47
CCDC140-201ENST00000295226 Q6YL49 198 aa12.13□□□□□ -0.47
CCDC140-201ENST00000295226 HSD17B13Q7Z5P4 300 aaPredicted RBP12.13□□□□□ -0.47
CCDC140-201ENST00000295226 TMEM219Q86XT9 240 aa12.13□□□□□ -0.47
CCDC140-201ENST00000295226 VKORC1L1Q8N0U8 176 aa12.13□□□□□ -0.47
CCDC140-201ENST00000295226 LHFPL5Q8TAF8 219 aa12.13□□□□□ -0.47
CCDC140-201ENST00000295226 GLYATL2Q8WU03 294 aa12.13□□□□□ -0.47
CCDC140-201ENST00000295226 GSKIPQ9P0R6 139 aa12.13□□□□□ -0.47
CCDC140-201ENST00000295226 MFSD2BA6NFX1 497 aa12.13□□□□□ -0.47
CCDC140-201ENST00000295226 FAM90A9PA6NNJ1 464 aa12.13□□□□□ -0.47
CCDC140-201ENST00000295226 SRRM4A7MD48 611 aaKnown RBP12.13□□□□□ -0.47
CCDC140-201ENST00000295226 H0Y980 276 aa12.13□□□□□ -0.47
CCDC140-201ENST00000295226 H0YIZ8 118 aa12.13□□□□□ -0.47
CCDC140-201ENST00000295226 IGKV1-39P01597 117 aa12.13□□□□□ -0.47
CCDC140-201ENST00000295226 IGKV1D-39P04432 117 aa12.13□□□□□ -0.47
CCDC140-201ENST00000295226 BRS3P32247 399 aa12.13□□□□□ -0.47
CCDC140-201ENST00000295226 MC5RP33032 325 aa12.13□□□□□ -0.47
CCDC140-201ENST00000295226 RPS16P62249 146 aaKnown RBP12.13□□□□□ -0.47
CCDC140-201ENST00000295226 RTL8BQ17RB0 113 aa12.13□□□□□ -0.47
CCDC140-201ENST00000295226 EAF1Q96JC9 268 aaPredicted RBP12.13□□□□□ -0.47
CCDC140-201ENST00000295226 PLEKHA2Q9HB19 425 aa12.13□□□□□ -0.47
CCDC140-201ENST00000295226 LIN7CQ9NUP9 197 aaKnown RBP12.13□□□□□ -0.47
CCDC140-201ENST00000295226 NIPBLQ6KC79 2804 aaeCLIP12.12□□□□□ -0.47
CCDC140-201ENST00000295226 KRBOX1C9JBD0 128 aa12.12□□□□□ -0.47
CCDC140-201ENST00000295226 HOXA3O43365 443 aaPredicted RBP12.12□□□□□ -0.47
CCDC140-201ENST00000295226 SERPINE2P07093 398 aa12.12□□□□□ -0.47
CCDC140-201ENST00000295226 IER3P46695 156 aa12.12□□□□□ -0.47
CCDC140-201ENST00000295226 ARHGDIBP52566 201 aa12.12□□□□□ -0.47
CCDC140-201ENST00000295226 F2RL1P55085 397 aa12.12□□□□□ -0.47
CCDC140-201ENST00000295226 SSX9Q7RTT3 188 aa12.12□□□□□ -0.47
CCDC140-201ENST00000295226 PDPNQ86YL7 162 aa12.12□□□□□ -0.47
CCDC140-201ENST00000295226 FLYWCH2Q96CP2 140 aaKnown RBP12.12□□□□□ -0.47
CCDC140-201ENST00000295226 SPIN2AQ99865 258 aa12.12□□□□□ -0.47
CCDC140-201ENST00000295226 SPIN2BQ9BPZ2 258 aa12.12□□□□□ -0.47
CCDC140-201ENST00000295226 TMEM222Q9H0R3 208 aa12.12□□□□□ -0.47
CCDC140-201ENST00000295226 MPTX1A8MV57 137 aa12.11□□□□□ -0.47
CCDC140-201ENST00000295226 CRLF1O75462 422 aa12.11□□□□□ -0.47
CCDC140-201ENST00000295226 DEDDO75618 318 aa12.11□□□□□ -0.47
CCDC140-201ENST00000295226 CDS2O95674 445 aa12.11□□□□□ -0.47
CCDC140-201ENST00000295226 MOSP00540 346 aa12.11□□□□□ -0.47
CCDC140-201ENST00000295226 FAM106CPP0CH98 169 aa12.11□□□□□ -0.47
CCDC140-201ENST00000295226 UCP1P25874 307 aa12.11□□□□□ -0.47
CCDC140-201ENST00000295226 S100A10P60903 97 aa12.11□□□□□ -0.47
CCDC140-201ENST00000295226 TUSC1Q2TAM9 212 aa12.11□□□□□ -0.47
CCDC140-201ENST00000295226 BAP18Q8IXM2 172 aa12.11□□□□□ -0.47
CCDC140-201ENST00000295226 OR4S2Q8NH73 311 aa12.11□□□□□ -0.47
CCDC140-201ENST00000295226 OR1S1Q8NH92 325 aa12.11□□□□□ -0.47
CCDC140-201ENST00000295226 IL22RA2Q969J5 263 aa12.11□□□□□ -0.47
CCDC140-201ENST00000295226 E5RGE8 158 aa12.1□□□□□ -0.47
CCDC140-201ENST00000295226 KRASP01116 189 aa12.1□□□□□ -0.47
CCDC140-201ENST00000295226 TMEM11P17152 192 aa12.1□□□□□ -0.47
CCDC140-201ENST00000295226 G6PCP35575 357 aa12.1□□□□□ -0.47
CCDC140-201ENST00000295226 KIR2DS2P43631 304 aa12.1□□□□□ -0.47
CCDC140-201ENST00000295226 DYNLT3P51808 116 aa12.1□□□□□ -0.47
CCDC140-201ENST00000295226 IZUMO4Q1ZYL8 232 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 69.3 ms