RNA–Protein interactions for RNA: ENST00000292510.5

VPS28-201, Transcript of VPS28, ESCRT-I subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS28, Length 979 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS28-201ENST00000292510 LPAR6P43657 344 aa10.42□□□□□ -0.74
VPS28-201ENST00000292510 KIAA0141Q14154 515 aaPredicted RBP10.42□□□□□ -0.74
VPS28-201ENST00000292510 MEF2DQ14814 521 aa10.42□□□□□ -0.74
VPS28-201ENST00000292510 DEFB136Q30KP8 78 aa10.42□□□□□ -0.74
VPS28-201ENST00000292510 ZNF585BQ52M93 769 aa10.42□□□□□ -0.74
VPS28-201ENST00000292510 AKIRIN2Q53H80 203 aa10.42□□□□□ -0.74
VPS28-201ENST00000292510 TMEM65Q6PI78 240 aa10.42□□□□□ -0.74
VPS28-201ENST00000292510 ETV3LQ6ZN32 361 aa10.42□□□□□ -0.74
VPS28-201ENST00000292510 ZNF695Q8IW36 515 aa10.42□□□□□ -0.74
VPS28-201ENST00000292510 OR5T1Q8NG75 326 aa10.42□□□□□ -0.74
VPS28-201ENST00000292510 TERB2Q8NHR7 220 aa10.42□□□□□ -0.74
VPS28-201ENST00000292510 MARCH1Q8TCQ1 289 aa10.42□□□□□ -0.74
VPS28-201ENST00000292510 CD300LFQ8TDQ1 290 aa10.42□□□□□ -0.74
VPS28-201ENST00000292510 SRSF12Q8WXF0 261 aaKnown RBP10.42□□□□□ -0.74
VPS28-201ENST00000292510 MS4A10Q96PG2 267 aa10.42□□□□□ -0.74
VPS28-201ENST00000292510 GNB4Q9HAV0 340 aa10.42□□□□□ -0.74
VPS28-201ENST00000292510 SLC2A9Q9NRM0 540 aa10.42□□□□□ -0.74
VPS28-201ENST00000292510 MEGF8Q7Z7M0 2845 aa10.42□□□□□ -0.74
VPS28-201ENST00000292510 NOTCH3Q9UM47 2321 aa10.41□□□□□ -0.74
VPS28-201ENST00000292510 TRAV3A0A0B4J244 114 aa10.41□□□□□ -0.74
VPS28-201ENST00000292510 DISC1C4P0D8 188 aa10.41□□□□□ -0.74
VPS28-201ENST00000292510 ACTL6BO94805 426 aa10.41□□□□□ -0.74
VPS28-201ENST00000292510 PF4P02776 101 aa10.41□□□□□ -0.74
VPS28-201ENST00000292510 NQO2P16083 231 aa10.41□□□□□ -0.74
VPS28-201ENST00000292510 S100GP29377 79 aa10.41□□□□□ -0.74
VPS28-201ENST00000292510 RAB9AP51151 201 aa10.41□□□□□ -0.74
VPS28-201ENST00000292510 TAS2R31P59538 309 aa10.41□□□□□ -0.74
VPS28-201ENST00000292510 OR4A47Q6IF82 309 aa10.41□□□□□ -0.74
VPS28-201ENST00000292510 MMD2Q8IY49 270 aa10.41□□□□□ -0.74
VPS28-201ENST00000292510 Q8N402 240 aa10.41□□□□□ -0.74
VPS28-201ENST00000292510 TCTEX1D1Q8N7M0 179 aa10.41□□□□□ -0.74
VPS28-201ENST00000292510 OR13C8Q8NGS7 320 aa10.41□□□□□ -0.74
VPS28-201ENST00000292510 VSTM2AQ8TAG5 236 aa10.41□□□□□ -0.74
VPS28-201ENST00000292510 TMEM167AQ8TBQ9 72 aa10.41□□□□□ -0.74
VPS28-201ENST00000292510 MYOZ3Q8TDC0 251 aa10.41□□□□□ -0.74
VPS28-201ENST00000292510 TRIM63Q969Q1 353 aa10.41□□□□□ -0.74
VPS28-201ENST00000292510 OR5B12Q96R08 314 aa10.41□□□□□ -0.74
VPS28-201ENST00000292510 PHB2Q99623 299 aa10.41□□□□□ -0.74
VPS28-201ENST00000292510 PLEKHA2Q9HB19 425 aa10.41□□□□□ -0.74
VPS28-201ENST00000292510 HRASLSQ9HDD0 168 aa10.41□□□□□ -0.74
VPS28-201ENST00000292510 A6NHS1 94 aa10.4□□□□□ -0.74
VPS28-201ENST00000292510 E7EUB6 86 aa10.4□□□□□ -0.74
VPS28-201ENST00000292510 MPPED1O15442 326 aa10.4□□□□□ -0.74
VPS28-201ENST00000292510 CREBL2O60519 120 aaPredicted RBP10.4□□□□□ -0.74
VPS28-201ENST00000292510 ETV6P41212 452 aa10.4□□□□□ -0.74
VPS28-201ENST00000292510 CDX1P47902 265 aaPredicted RBP10.4□□□□□ -0.74
VPS28-201ENST00000292510 PIGPP57054 158 aa10.4□□□□□ -0.74
VPS28-201ENST00000292510 SPANXN2Q5MJ10 180 aa10.4□□□□□ -0.74
VPS28-201ENST00000292510 ZNF491Q8N8L2 437 aa10.4□□□□□ -0.74
VPS28-201ENST00000292510 DMBX1Q8NFW5 382 aa10.4□□□□□ -0.74
VPS28-201ENST00000292510 OR51S1Q8NGJ8 323 aa10.4□□□□□ -0.74
VPS28-201ENST00000292510 OR5M8Q8NGP6 311 aa10.4□□□□□ -0.74
VPS28-201ENST00000292510 SRRQ9GZT4 340 aa10.4□□□□□ -0.74
VPS28-201ENST00000292510 ZNF355PQ9NSJ1 428 aa10.4□□□□□ -0.74
VPS28-201ENST00000292510 TMEM140Q9NV12 185 aa10.4□□□□□ -0.74
VPS28-201ENST00000292510 BET1LQ9NYM9 111 aa10.4□□□□□ -0.74
VPS28-201ENST00000292510 COMMD9Q9P000 198 aa10.4□□□□□ -0.74
VPS28-201ENST00000292510 A0A1B0GW64 132 aa10.39□□□□□ -0.75
VPS28-201ENST00000292510 HMX3A6NHT5 357 aa10.39□□□□□ -0.75
VPS28-201ENST00000292510 MARCH11A6NNE9 402 aa10.39□□□□□ -0.75
VPS28-201ENST00000292510 KRASP01116 189 aa10.39□□□□□ -0.75
VPS28-201ENST00000292510 IL6RP08887 468 aaPredicted RBP10.39□□□□□ -0.75
VPS28-201ENST00000292510 G6PCP35575 357 aa10.39□□□□□ -0.75
VPS28-201ENST00000292510 RND3P61587 244 aa10.39□□□□□ -0.75
VPS28-201ENST00000292510 RPL8P62917 257 aaKnown RBP10.39□□□□□ -0.75
VPS28-201ENST00000292510 DEFA5Q01523 94 aa10.39□□□□□ -0.75
VPS28-201ENST00000292510 KLF9Q13886 244 aaPredicted RBP10.39□□□□□ -0.75
VPS28-201ENST00000292510 POU2AF1Q16633 256 aa10.39□□□□□ -0.75
VPS28-201ENST00000292510 C1QL4Q86Z23 238 aa10.39□□□□□ -0.75
VPS28-201ENST00000292510 ZFAND1Q8TCF1 268 aa10.39□□□□□ -0.75
VPS28-201ENST00000292510 ZNF486Q96H40 463 aaPredicted RBP10.39□□□□□ -0.75
VPS28-201ENST00000292510 RAX2Q96IS3 184 aa10.39□□□□□ -0.75
VPS28-201ENST00000292510 FYTTD1Q96QD9 318 aaKnown RBP10.39□□□□□ -0.75
VPS28-201ENST00000292510 ALX4Q9H161 411 aaPredicted RBP10.39□□□□□ -0.75
VPS28-201ENST00000292510 MCUBQ9NWR8 336 aa10.39□□□□□ -0.75
VPS28-201ENST00000292510 TEX22C9J3V5 150 aa10.38□□□□□ -0.75
VPS28-201ENST00000292510 UPK2O00526 184 aa10.38□□□□□ -0.75
VPS28-201ENST00000292510 IGKV1-39P01597 117 aa10.38□□□□□ -0.75
VPS28-201ENST00000292510 IGHV3-11P01762 117 aa10.38□□□□□ -0.75
VPS28-201ENST00000292510 IGKV1D-39P04432 117 aa10.38□□□□□ -0.75
VPS28-201ENST00000292510 CTSDP07339 412 aaPredicted RBP10.38□□□□□ -0.75
VPS28-201ENST00000292510 HLA-GP17693 338 aa10.38□□□□□ -0.75
VPS28-201ENST00000292510 PTBP1P26599 531 aaKnown RBP eCLIP10.38□□□□□ -0.75
VPS28-201ENST00000292510 RPL27AP46776 148 aaKnown RBP10.38□□□□□ -0.75
VPS28-201ENST00000292510 TPPP2P59282 170 aa10.38□□□□□ -0.75
VPS28-201ENST00000292510 ERVK-16P61578 105 aa10.38□□□□□ -0.75
VPS28-201ENST00000292510 C19orf35Q6ZS72 473 aa10.38□□□□□ -0.75
VPS28-201ENST00000292510 MRPL41Q8IXM3 137 aaKnown RBP10.38□□□□□ -0.75
VPS28-201ENST00000292510 TOMM5Q8N4H5 51 aa10.38□□□□□ -0.75
VPS28-201ENST00000292510 OR4A5Q8NH83 315 aa10.38□□□□□ -0.75
VPS28-201ENST00000292510 C4orf3Q8WVX3 66 aa10.38□□□□□ -0.75
VPS28-201ENST00000292510 UBE2E2Q96LR5 201 aa10.38□□□□□ -0.75
VPS28-201ENST00000292510 TP53RKQ96S44 253 aa10.38□□□□□ -0.75
VPS28-201ENST00000292510 PRRT1Q99946 306 aa10.38□□□□□ -0.75
VPS28-201ENST00000292510 AIFM2Q9BRQ8 373 aa10.38□□□□□ -0.75
VPS28-201ENST00000292510 RTBDNQ9BSG5 229 aaPredicted RBP10.38□□□□□ -0.75
VPS28-201ENST00000292510 C5orf66Q9H5L9 145 aa10.38□□□□□ -0.75
VPS28-201ENST00000292510 COA4Q9NYJ1 87 aa10.38□□□□□ -0.75
VPS28-201ENST00000292510 COPZ2Q9P299 210 aa10.38□□□□□ -0.75
VPS28-201ENST00000292510 VSIG4Q9Y279 399 aa10.38□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 68.3 ms