RNA–Protein interactions for RNA: ENST00000291552.8

U2AF1-201, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene U2AF1, Length 962 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-201ENST00000291552 BEST4Q8NFU0 473 aa19.12■□□□□ 0.65
U2AF1-201ENST00000291552 OR2A7Q96R45 310 aa19.12■□□□□ 0.65
U2AF1-201ENST00000291552 EDA2RQ9HAV5 297 aa19.12■□□□□ 0.65
U2AF1-201ENST00000291552 ETV7Q9Y603 341 aa19.12■□□□□ 0.65
U2AF1-201ENST00000291552 LOC100506127A0A0U1RQW1 187 aa19.11■□□□□ 0.65
U2AF1-201ENST00000291552 PPP5D1E7EU14 171 aa19.11■□□□□ 0.65
U2AF1-201ENST00000291552 MYOD1P15172 320 aa19.11■□□□□ 0.65
U2AF1-201ENST00000291552 EDN2P20800 178 aa19.11■□□□□ 0.65
U2AF1-201ENST00000291552 RPL27AP46776 148 aaKnown RBP19.11■□□□□ 0.65
U2AF1-201ENST00000291552 SCAND1P57086 179 aa19.11■□□□□ 0.65
U2AF1-201ENST00000291552 TATDN3Q17R31 274 aa19.11■□□□□ 0.65
U2AF1-201ENST00000291552 C15orf32Q32M92 178 aa19.11■□□□□ 0.65
U2AF1-201ENST00000291552 IDNKQ5T6J7 187 aa19.11■□□□□ 0.65
U2AF1-201ENST00000291552 ZNF66Q6ZN08 573 aa19.11■□□□□ 0.65
U2AF1-201ENST00000291552 HOGA1Q86XE5 327 aa19.11■□□□□ 0.65
U2AF1-201ENST00000291552 CCL28Q9NRJ3 127 aa19.11■□□□□ 0.65
U2AF1-201ENST00000291552 ZNF257Q9Y2Q1 563 aa19.11■□□□□ 0.65
U2AF1-201ENST00000291552 NPIPB5A8MRT5 1133 aa19.1■□□□□ 0.65
U2AF1-201ENST00000291552 TNFSF12O43508 249 aa19.1■□□□□ 0.65
U2AF1-201ENST00000291552 ZNF735P0CB33 412 aa19.1■□□□□ 0.65
U2AF1-201ENST00000291552 AREGP15514 252 aa19.1■□□□□ 0.65
U2AF1-201ENST00000291552 FCGR2CP31995 323 aa19.1■□□□□ 0.65
U2AF1-201ENST00000291552 NEDD8Q15843 81 aa19.1■□□□□ 0.65
U2AF1-201ENST00000291552 HAGHQ16775 308 aa19.1■□□□□ 0.65
U2AF1-201ENST00000291552 SECTM1Q8WVN6 248 aa19.1■□□□□ 0.65
U2AF1-201ENST00000291552 FANCD2OSQ96PS1 177 aa19.1■□□□□ 0.65
U2AF1-201ENST00000291552 PEMTQ9UBM1 199 aa19.1■□□□□ 0.65
U2AF1-201ENST00000291552 CGB1A6NKQ9 187 aa19.09■□□□□ 0.65
U2AF1-201ENST00000291552 HLA-AP01891 365 aaKnown RBP19.09■□□□□ 0.65
U2AF1-201ENST00000291552 ARPC4P59998 168 aa19.09■□□□□ 0.65
U2AF1-201ENST00000291552 SSX9Q7RTT3 188 aa19.09■□□□□ 0.65
U2AF1-201ENST00000291552 SLC25A42Q86VD7 318 aa19.09■□□□□ 0.65
U2AF1-201ENST00000291552 OR13F1Q8NGS4 319 aa19.09■□□□□ 0.65
U2AF1-201ENST00000291552 VSTM2AQ8TAG5 236 aa19.09■□□□□ 0.65
U2AF1-201ENST00000291552 FYTTD1Q96QD9 318 aaKnown RBP19.09■□□□□ 0.65
U2AF1-201ENST00000291552 AUNIPQ9H7T9 357 aa19.09■□□□□ 0.65
U2AF1-201ENST00000291552 SLC2A9Q9NRM0 540 aa19.09■□□□□ 0.65
U2AF1-201ENST00000291552 AIREO43918 545 aa19.08■□□□□ 0.64
U2AF1-201ENST00000291552 NDUFB8O95169 186 aa19.08■□□□□ 0.64
U2AF1-201ENST00000291552 FCER2P06734 321 aa19.08■□□□□ 0.64
U2AF1-201ENST00000291552 LYL1P12980 280 aa19.08■□□□□ 0.64
U2AF1-201ENST00000291552 MSMO1Q15800 293 aa19.08■□□□□ 0.64
U2AF1-201ENST00000291552 CD300EQ496F6 205 aaPredicted RBP19.08■□□□□ 0.64
U2AF1-201ENST00000291552 OR2K2Q8NGT1 345 aa19.08■□□□□ 0.64
U2AF1-201ENST00000291552 CCDC140Q96MF4 163 aa19.08■□□□□ 0.64
U2AF1-201ENST00000291552 PPYP01298 95 aa19.07■□□□□ 0.64
U2AF1-201ENST00000291552 CRYGCP07315 174 aa19.07■□□□□ 0.64
U2AF1-201ENST00000291552 MAS1LP35410 378 aa19.07■□□□□ 0.64
U2AF1-201ENST00000291552 TGFBR1P36897 503 aa19.07■□□□□ 0.64
U2AF1-201ENST00000291552 KLK9Q2XQG4 91 aa19.07■□□□□ 0.64
U2AF1-201ENST00000291552 TIMM50Q3ZCQ8 353 aa19.07■□□□□ 0.64
U2AF1-201ENST00000291552 GTSCR1Q86UQ5 136 aa19.07■□□□□ 0.64
U2AF1-201ENST00000291552 FBXL7Q9UJT9 491 aa19.07■□□□□ 0.64
U2AF1-201ENST00000291552 KLK9Q9UKQ9 250 aa19.07■□□□□ 0.64
U2AF1-201ENST00000291552 S4R3C0 116 aa19.07■□□□□ 0.64
U2AF1-201ENST00000291552 A0A0A6YYH2 397 aa19.06■□□□□ 0.64
U2AF1-201ENST00000291552 A6NJ64 397 aa19.06■□□□□ 0.64
U2AF1-201ENST00000291552 ZNF785A8K8V0 405 aa19.06■□□□□ 0.64
U2AF1-201ENST00000291552 IGHV3-23P01764 117 aa19.06■□□□□ 0.64
U2AF1-201ENST00000291552 KIR2DS2P43631 304 aa19.06■□□□□ 0.64
U2AF1-201ENST00000291552 OR4A47Q6IF82 309 aa19.06■□□□□ 0.64
U2AF1-201ENST00000291552 SPATA25Q9BR10 227 aa19.06■□□□□ 0.64
U2AF1-201ENST00000291552 GAR1Q9NY12 217 aaKnown RBP19.06■□□□□ 0.64
U2AF1-201ENST00000291552 C2orf70A6NJV1 201 aa19.05■□□□□ 0.64
U2AF1-201ENST00000291552 CTRB1P17538 263 aa19.05■□□□□ 0.64
U2AF1-201ENST00000291552 PSMB6P28072 239 aa19.05■□□□□ 0.64
U2AF1-201ENST00000291552 RPL8P62917 257 aaKnown RBP19.05■□□□□ 0.64
U2AF1-201ENST00000291552 ZFAND6Q6FIF0 208 aa19.05■□□□□ 0.64
U2AF1-201ENST00000291552 CTRB2Q6GPI1 263 aa19.05■□□□□ 0.64
U2AF1-201ENST00000291552 SPAG16Q8N0X2 631 aa19.05■□□□□ 0.64
U2AF1-201ENST00000291552 KCTD12Q96CX2 325 aaKnown RBP19.05■□□□□ 0.64
U2AF1-201ENST00000291552 SLC5A7Q9GZV3 580 aa19.05■□□□□ 0.64
U2AF1-201ENST00000291552 PLEKHA3Q9HB20 300 aa19.05■□□□□ 0.64
U2AF1-201ENST00000291552 BET1LQ9NYM9 111 aa19.05■□□□□ 0.64
U2AF1-201ENST00000291552 HYDINQ4G0P3 5121 aa19.04■□□□□ 0.64
U2AF1-201ENST00000291552 OR2C1O95371 312 aa19.04■□□□□ 0.64
U2AF1-201ENST00000291552 HRASP01112 189 aa19.04■□□□□ 0.64
U2AF1-201ENST00000291552 REG1AP05451 166 aa19.04■□□□□ 0.64
U2AF1-201ENST00000291552 HLA-GP17693 338 aa19.04■□□□□ 0.64
U2AF1-201ENST00000291552 DEFB114Q30KQ6 69 aa19.04■□□□□ 0.64
U2AF1-201ENST00000291552 KCTD21Q4G0X4 260 aa19.04■□□□□ 0.64
U2AF1-201ENST00000291552 LINC00322Q6ZN03 302 aaPredicted RBP19.04■□□□□ 0.64
U2AF1-201ENST00000291552 TRAV3A0A0B4J244 114 aa19.03■□□□□ 0.64
U2AF1-201ENST00000291552 DPPA5A6NC42 116 aa19.03■□□□□ 0.64
U2AF1-201ENST00000291552 MEIS3P1A6NDR6 274 aa19.03■□□□□ 0.64
U2AF1-201ENST00000291552 SULT1C2O00338 296 aa19.03■□□□□ 0.64
U2AF1-201ENST00000291552 RBFOX2O43251 390 aaKnown RBP eCLIP19.03■□□□□ 0.64
U2AF1-201ENST00000291552 GGCTO75223 188 aaKnown RBP19.03■□□□□ 0.64
U2AF1-201ENST00000291552 CD7P09564 240 aa19.03■□□□□ 0.64
U2AF1-201ENST00000291552 FXYD4P59646 89 aa19.03■□□□□ 0.64
U2AF1-201ENST00000291552 CD81P60033 236 aa19.03■□□□□ 0.64
U2AF1-201ENST00000291552 ZBTB34Q8NCN2 500 aa19.03■□□□□ 0.64
U2AF1-201ENST00000291552 CACNG8Q8WXS5 425 aa19.03■□□□□ 0.64
U2AF1-201ENST00000291552 ISOC1Q96CN7 298 aa19.03■□□□□ 0.64
U2AF1-201ENST00000291552 WFDC10AQ9H1F0 79 aa19.03■□□□□ 0.64
U2AF1-201ENST00000291552 TUBA4BQ9H853 241 aa19.03■□□□□ 0.64
U2AF1-201ENST00000291552 RETNQ9HD89 108 aa19.03■□□□□ 0.64
U2AF1-201ENST00000291552 ZC4H2Q9NQZ6 224 aa19.03■□□□□ 0.64
U2AF1-201ENST00000291552 PLECQ15149 4684 aaKnown RBP19.03■□□□□ 0.64
U2AF1-201ENST00000291552 IGLV11-55A0A075B6I3 123 aa19.02■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms