RNA–Protein interactions for RNA: ENST00000288976.3

PTPDC1-201, Transcript of protein tyrosine phosphatase domain containing 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PTPDC1, Length 4,398 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPDC1-201ENST00000288976 CD24P25063 80 aa6.96□□□□□ -1.3
PTPDC1-201ENST00000288976 RPS10P46783 165 aaKnown RBP6.96□□□□□ -1.3
PTPDC1-201ENST00000288976 PSMB3P49720 205 aa6.96□□□□□ -1.3
PTPDC1-201ENST00000288976 NSUN5P1Q3KNT7 163 aa6.96□□□□□ -1.3
PTPDC1-201ENST00000288976 OVCH2Q7RTZ1 564 aa6.96□□□□□ -1.3
PTPDC1-201ENST00000288976 FAM216BQ8N7L0 139 aa6.96□□□□□ -1.3
PTPDC1-201ENST00000288976 C15orf54Q8N8G6 183 aa6.96□□□□□ -1.3
PTPDC1-201ENST00000288976 C8orf31Q8N9H6 132 aa6.96□□□□□ -1.3
PTPDC1-201ENST00000288976 OR4F17Q8NGA8 305 aa6.96□□□□□ -1.3
PTPDC1-201ENST00000288976 OR52M1Q8NGK5 317 aa6.96□□□□□ -1.3
PTPDC1-201ENST00000288976 OR4F5Q8NH21 305 aa6.96□□□□□ -1.3
PTPDC1-201ENST00000288976 OR4F4Q96R69 305 aa6.96□□□□□ -1.3
PTPDC1-201ENST00000288976 UFC1Q9Y3C8 167 aa6.96□□□□□ -1.3
PTPDC1-201ENST00000288976 IGKV3OR2-268A0A0C4DH90 116 aa6.96□□□□□ -1.3
PTPDC1-201ENST00000288976 UBE2L5PA0A1B0GUS4 154 aa6.96□□□□□ -1.3
PTPDC1-201ENST00000288976 CHEK1O14757 476 aa6.96□□□□□ -1.3
PTPDC1-201ENST00000288976 FOXH1O75593 365 aa6.96□□□□□ -1.3
PTPDC1-201ENST00000288976 LY6HO94772 140 aa6.96□□□□□ -1.3
PTPDC1-201ENST00000288976 TCRBP04435 133 aa6.96□□□□□ -1.3
PTPDC1-201ENST00000288976 NTF3P20783 257 aa6.96□□□□□ -1.3
PTPDC1-201ENST00000288976 HTR1DP28221 377 aa6.96□□□□□ -1.3
PTPDC1-201ENST00000288976 S100A12P80511 92 aa6.96□□□□□ -1.3
PTPDC1-201ENST00000288976 ZNF525Q8N782 197 aa6.96□□□□□ -1.3
PTPDC1-201ENST00000288976 LY6G5BQ8NDX9 201 aa6.96□□□□□ -1.3
PTPDC1-201ENST00000288976 OR1B1Q8NGR6 318 aa6.96□□□□□ -1.3
PTPDC1-201ENST00000288976 FOXC2Q99958 501 aa6.96□□□□□ -1.3
PTPDC1-201ENST00000288976 SLC25A21Q9BQT8 299 aaPredicted RBP6.96□□□□□ -1.3
PTPDC1-201ENST00000288976 GHITMQ9H3K2 345 aa6.96□□□□□ -1.3
PTPDC1-201ENST00000288976 ELF5Q9UKW6 265 aaPredicted RBP6.96□□□□□ -1.3
PTPDC1-201ENST00000288976 S4R3C0 116 aa6.96□□□□□ -1.3
PTPDC1-201ENST00000288976 ITGB1BP1O14713 200 aa6.95□□□□□ -1.3
PTPDC1-201ENST00000288976 DFFBO76075 338 aa6.95□□□□□ -1.3
PTPDC1-201ENST00000288976 IGHV3-11P01762 117 aa6.95□□□□□ -1.3
PTPDC1-201ENST00000288976 CTDSP1Q9GZU7 261 aa6.95□□□□□ -1.3
PTPDC1-201ENST00000288976 CACNG5Q9UF02 275 aa6.95□□□□□ -1.3
PTPDC1-201ENST00000288976 FLVCR2Q9UPI3 526 aa6.95□□□□□ -1.3
PTPDC1-201ENST00000288976 TMSB15BA0A087X1C1 80 aa6.95□□□□□ -1.3
PTPDC1-201ENST00000288976 KRBOX1C9JBD0 128 aa6.95□□□□□ -1.3
PTPDC1-201ENST00000288976 METTL15P1P0C7V9 234 aa6.95□□□□□ -1.3
PTPDC1-201ENST00000288976 FAM106CPP0CH98 169 aa6.95□□□□□ -1.3
PTPDC1-201ENST00000288976 RAB7AP51149 207 aa6.95□□□□□ -1.3
PTPDC1-201ENST00000288976 RRN3P1Q2M238 152 aa6.95□□□□□ -1.3
PTPDC1-201ENST00000288976 Q6ZPA2 131 aa6.95□□□□□ -1.3
PTPDC1-201ENST00000288976 WDR89Q96FK6 387 aaPredicted RBP6.95□□□□□ -1.3
PTPDC1-201ENST00000288976 ABHD14BQ96IU4 210 aa6.95□□□□□ -1.3
PTPDC1-201ENST00000288976 HRNRQ86YZ3 2850 aaPredicted RBP6.95□□□□□ -1.3
PTPDC1-201ENST00000288976 SNRPGP15A8MWD9 76 aa6.95□□□□□ -1.3
PTPDC1-201ENST00000288976 C15orf65H3BRN8 121 aa6.95□□□□□ -1.3
PTPDC1-201ENST00000288976 CGB3P0DN86 165 aa6.95□□□□□ -1.3
PTPDC1-201ENST00000288976 CGB7P0DN87 165 aa6.95□□□□□ -1.3
PTPDC1-201ENST00000288976 GZMKP49863 264 aa6.95□□□□□ -1.3
PTPDC1-201ENST00000288976 ZNF137PP52743 207 aa6.95□□□□□ -1.3
PTPDC1-201ENST00000288976 IFITM3Q01628 133 aa6.95□□□□□ -1.3
PTPDC1-201ENST00000288976 KIAA0141Q14154 515 aaPredicted RBP6.95□□□□□ -1.3
PTPDC1-201ENST00000288976 SURF2Q15527 256 aaPredicted RBP6.95□□□□□ -1.3
PTPDC1-201ENST00000288976 DHRS11Q6UWP2 260 aa6.95□□□□□ -1.3
PTPDC1-201ENST00000288976 LYPD2Q6UXB3 125 aa6.95□□□□□ -1.3
PTPDC1-201ENST00000288976 TEX29Q8N6K0 151 aa6.95□□□□□ -1.3
PTPDC1-201ENST00000288976 ZNRF1Q8ND25 227 aa6.95□□□□□ -1.3
PTPDC1-201ENST00000288976 ZNF714Q96N38 554 aa6.95□□□□□ -1.3
PTPDC1-201ENST00000288976 HDHD3Q9BSH5 251 aaPredicted RBP6.95□□□□□ -1.3
PTPDC1-201ENST00000288976 SSBP3Q9BWW4 388 aaPredicted RBP6.95□□□□□ -1.3
PTPDC1-201ENST00000288976 LINC00527Q9UJ94 153 aa6.95□□□□□ -1.3
PTPDC1-201ENST00000288976 JPT1Q9UK76 154 aa6.95□□□□□ -1.3
PTPDC1-201ENST00000288976 TENM4Q6N022 2769 aa6.95□□□□□ -1.3
PTPDC1-201ENST00000288976 TRBV6-7A0A0A0MS04 114 aa6.94□□□□□ -1.3
PTPDC1-201ENST00000288976 KRTAP10-9P60411 292 aa6.94□□□□□ -1.3
PTPDC1-201ENST00000288976 WDR25Q64LD2 544 aaPredicted RBP6.94□□□□□ -1.3
PTPDC1-201ENST00000288976 C1orf122Q6ZSJ8 110 aa6.94□□□□□ -1.3
PTPDC1-201ENST00000288976 SSMEM1Q8WWF3 244 aa6.94□□□□□ -1.3
PTPDC1-201ENST00000288976 DDB2Q92466 427 aa6.94□□□□□ -1.3
PTPDC1-201ENST00000288976 ZNF705GA8MUZ8 300 aaPredicted RBP6.94□□□□□ -1.3
PTPDC1-201ENST00000288976 KIAA1324LA8MWY0 1029 aaPredicted RBP6.94□□□□□ -1.3
PTPDC1-201ENST00000288976 SEC14L6B5MCN3 397 aa6.94□□□□□ -1.3
PTPDC1-201ENST00000288976 M0R1W7 72 aa6.94□□□□□ -1.3
PTPDC1-201ENST00000288976 DUS4LO95620 317 aaKnown RBP6.94□□□□□ -1.3
PTPDC1-201ENST00000288976 H2AFB1P0C5Y9 115 aa6.94□□□□□ -1.3
PTPDC1-201ENST00000288976 DLX6P56179 175 aa6.94□□□□□ -1.3
PTPDC1-201ENST00000288976 NECAP1Q8NC96 275 aa6.94□□□□□ -1.3
PTPDC1-201ENST00000288976 KBTBD11-OT1A0A1B0GTJ5 212 aa6.94□□□□□ -1.3
PTPDC1-201ENST00000288976 C17orf98A8MV24 154 aa6.94□□□□□ -1.3
PTPDC1-201ENST00000288976 PLA2G10O15496 165 aa6.94□□□□□ -1.3
PTPDC1-201ENST00000288976 SLC25A17O43808 307 aa6.94□□□□□ -1.3
PTPDC1-201ENST00000288976 ZNF735P0CB33 412 aa6.94□□□□□ -1.3
PTPDC1-201ENST00000288976 FGF7P21781 194 aa6.94□□□□□ -1.3
PTPDC1-201ENST00000288976 HTR2BP41595 481 aa6.94□□□□□ -1.3
PTPDC1-201ENST00000288976 TCF23Q7RTU1 214 aa6.94□□□□□ -1.3
PTPDC1-201ENST00000288976 GBGT1Q8N5D6 347 aa6.94□□□□□ -1.3
PTPDC1-201ENST00000288976 GVQW1Q8N7I0 195 aa6.94□□□□□ -1.3
PTPDC1-201ENST00000288976 DUSP18Q8NEJ0 188 aa6.94□□□□□ -1.3
PTPDC1-201ENST00000288976 OR4C16Q8NGL9 310 aa6.94□□□□□ -1.3
PTPDC1-201ENST00000288976 OR4S2Q8NH73 311 aa6.94□□□□□ -1.3
PTPDC1-201ENST00000288976 VSTM2AQ8TAG5 236 aa6.94□□□□□ -1.3
PTPDC1-201ENST00000288976 TMED6Q8WW62 240 aa6.94□□□□□ -1.3
PTPDC1-201ENST00000288976 R3HDM4Q96D70 268 aa6.94□□□□□ -1.3
PTPDC1-201ENST00000288976 CIB3Q96Q77 187 aaPredicted RBP6.94□□□□□ -1.3
PTPDC1-201ENST00000288976 LIME1Q9H400 295 aa6.94□□□□□ -1.3
PTPDC1-201ENST00000288976 ZNF331Q9NQX6 463 aaPredicted RBP6.94□□□□□ -1.3
PTPDC1-201ENST00000288976 A0A087X0M5 115 aa6.94□□□□□ -1.3
PTPDC1-201ENST00000288976 A0A1B0GX30 115 aa6.94□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms