RNA–Protein interactions for RNA: ENST00000288840.9

SMAD6-201, Transcript of SMAD family member 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMAD6, Length 3,835 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD6-201ENST00000288840 RPL19P84098 196 aaKnown RBP13.27□□□□□ -0.28
SMAD6-201ENST00000288840 FAM90A2PQ658T7 463 aa13.27□□□□□ -0.28
SMAD6-201ENST00000288840 PSMG3Q9BT73 122 aaPredicted RBP13.27□□□□□ -0.28
SMAD6-201ENST00000288840 CREBBPQ92793 2442 aa13.27□□□□□ -0.28
SMAD6-201ENST00000288840 MALRD1Q5VYJ5 2156 aa13.27□□□□□ -0.28
SMAD6-201ENST00000288840 MUC3AQ02505 3323 aa13.27□□□□□ -0.29
SMAD6-201ENST00000288840 IQCF6A8MYZ5 107 aa13.27□□□□□ -0.29
SMAD6-201ENST00000288840 FAM157AC9JC47 383 aa13.27□□□□□ -0.29
SMAD6-201ENST00000288840 MGST3O14880 152 aa13.27□□□□□ -0.29
SMAD6-201ENST00000288840 GALR2O43603 387 aaPredicted RBP13.27□□□□□ -0.29
SMAD6-201ENST00000288840 C1QTNF9P0C862 333 aa13.27□□□□□ -0.29
SMAD6-201ENST00000288840 ZNF124Q15973 351 aa13.27□□□□□ -0.29
SMAD6-201ENST00000288840 SLC35E4Q6ICL7 350 aa13.27□□□□□ -0.29
SMAD6-201ENST00000288840 RPRMLQ8N4K4 120 aa13.27□□□□□ -0.29
SMAD6-201ENST00000288840 CISD2Q8N5K1 135 aaKnown RBP13.27□□□□□ -0.29
SMAD6-201ENST00000288840 ZBTB34Q8NCN2 500 aa13.27□□□□□ -0.29
SMAD6-201ENST00000288840 TUBG2Q9NRH3 451 aa13.27□□□□□ -0.29
SMAD6-201ENST00000288840 OR6C3Q9NZP0 311 aa13.27□□□□□ -0.29
SMAD6-201ENST00000288840 TCF19Q9Y242 345 aa13.27□□□□□ -0.29
SMAD6-201ENST00000288840 J3QR06 171 aa13.27□□□□□ -0.29
SMAD6-201ENST00000288840 SLC17A3O00476 420 aa13.27□□□□□ -0.29
SMAD6-201ENST00000288840 HPRT1P00492 218 aa13.27□□□□□ -0.29
SMAD6-201ENST00000288840 P2RY6Q15077 328 aa13.27□□□□□ -0.29
SMAD6-201ENST00000288840 RTL8BQ17RB0 113 aa13.27□□□□□ -0.29
SMAD6-201ENST00000288840 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP13.27□□□□□ -0.299e-6■□□□□ 9.3
SMAD6-201ENST00000288840 SUMO1P63165 101 aaKnown RBP13.26□□□□□ -0.29
SMAD6-201ENST00000288840 OR4X1Q8NH49 305 aa13.26□□□□□ -0.29
SMAD6-201ENST00000288840 MS4A5Q9H3V2 200 aa13.26□□□□□ -0.29
SMAD6-201ENST00000288840 MANBALQ9NQG1 85 aa13.26□□□□□ -0.29
SMAD6-201ENST00000288840 RAB29O14966 203 aa13.26□□□□□ -0.29
SMAD6-201ENST00000288840 FOLR2P14207 255 aa13.26□□□□□ -0.29
SMAD6-201ENST00000288840 ZNF146Q15072 292 aa13.26□□□□□ -0.29
SMAD6-201ENST00000288840 KIAA1644Q3SXP7 199 aa13.26□□□□□ -0.29
SMAD6-201ENST00000288840 PRR31Q5SQ13 230 aa13.26□□□□□ -0.29
SMAD6-201ENST00000288840 TCF23Q7RTU1 214 aa13.26□□□□□ -0.29
SMAD6-201ENST00000288840 IMMP2LQ96T52 175 aa13.26□□□□□ -0.29
SMAD6-201ENST00000288840 PITPNC1Q9UKF7 332 aa13.26□□□□□ -0.29
SMAD6-201ENST00000288840 FCN1O00602 326 aa13.26□□□□□ -0.29
SMAD6-201ENST00000288840 APOA2P02652 100 aa13.26□□□□□ -0.29
SMAD6-201ENST00000288840 FXYD3Q14802 87 aa13.26□□□□□ -0.29
SMAD6-201ENST00000288840 CD177Q8N6Q3 437 aa13.26□□□□□ -0.29
SMAD6-201ENST00000288840 BLNKQ8WV28 456 aa13.26□□□□□ -0.29
SMAD6-201ENST00000288840 IGF2RP11717 2491 aa13.25□□□□□ -0.29
SMAD6-201ENST00000288840 A0A1W2PRD5 423 aa13.25□□□□□ -0.29
SMAD6-201ENST00000288840 A0A1W2PRF3 423 aa13.25□□□□□ -0.29
SMAD6-201ENST00000288840 A0A1W2PRM7 423 aa13.25□□□□□ -0.29
SMAD6-201ENST00000288840 OPRK1P41145 380 aa13.25□□□□□ -0.29
SMAD6-201ENST00000288840 IER3P46695 156 aa13.25□□□□□ -0.29
SMAD6-201ENST00000288840 BPIFB3P59826 476 aa13.25□□□□□ -0.29
SMAD6-201ENST00000288840 TIGITQ495A1 244 aa13.25□□□□□ -0.29
SMAD6-201ENST00000288840 MRPL54Q6P161 138 aaKnown RBP13.25□□□□□ -0.29
SMAD6-201ENST00000288840 LYPD6BQ8NI32 183 aa13.25□□□□□ -0.29
SMAD6-201ENST00000288840 PRRG2O14669 202 aa13.25□□□□□ -0.29
SMAD6-201ENST00000288840 KRTDAPP60985 99 aa13.25□□□□□ -0.29
SMAD6-201ENST00000288840 SLC24A4Q8NFF2 622 aa13.25□□□□□ -0.29
SMAD6-201ENST00000288840 OR10G8Q8NGN5 311 aa13.25□□□□□ -0.29
SMAD6-201ENST00000288840 CD33P20138 364 aa13.25□□□□□ -0.29
SMAD6-201ENST00000288840 CD81P60033 236 aa13.25□□□□□ -0.29
SMAD6-201ENST00000288840 TOMM20LQ6UXN7 152 aa13.25□□□□□ -0.29
SMAD6-201ENST00000288840 LHFPL4Q7Z7J7 247 aa13.25□□□□□ -0.29
SMAD6-201ENST00000288840 MS4A10Q96PG2 267 aa13.25□□□□□ -0.29
SMAD6-201ENST00000288840 RNF7Q9UBF6 113 aa13.25□□□□□ -0.29
SMAD6-201ENST00000288840 RALYQ9UKM9 306 aaKnown RBP13.25□□□□□ -0.29
SMAD6-201ENST00000288840 IGHV1-18A0A0C4DH31 117 aa13.24□□□□□ -0.29
SMAD6-201ENST00000288840 SCO2A0A1W2PP80 73 aa13.24□□□□□ -0.29
SMAD6-201ENST00000288840 HRASP01112 189 aa13.24□□□□□ -0.29
SMAD6-201ENST00000288840 PMCHP20382 165 aa13.24□□□□□ -0.29
SMAD6-201ENST00000288840 RPL29P47914 159 aaKnown RBP13.24□□□□□ -0.29
SMAD6-201ENST00000288840 RHOBP62745 196 aa13.24□□□□□ -0.29
SMAD6-201ENST00000288840 TEPPQ6URK8 271 aa13.24□□□□□ -0.29
SMAD6-201ENST00000288840 Q6ZR03 302 aa13.24□□□□□ -0.29
SMAD6-201ENST00000288840 Q6ZSR3 168 aa13.24□□□□□ -0.29
SMAD6-201ENST00000288840 SNRNP40Q96DI7 357 aaKnown RBP13.24□□□□□ -0.29
SMAD6-201ENST00000288840 NAT8BQ9UHF3 227 aa13.24□□□□□ -0.29
SMAD6-201ENST00000288840 H0Y8G0 127 aa13.24□□□□□ -0.29
SMAD6-201ENST00000288840 SLC31A2O15432 143 aa13.24□□□□□ -0.29
SMAD6-201ENST00000288840 REG1AP05451 166 aa13.24□□□□□ -0.29
SMAD6-201ENST00000288840 ORM2P19652 201 aa13.24□□□□□ -0.29
SMAD6-201ENST00000288840 SLC35E1Q96K37 410 aa13.24□□□□□ -0.29
SMAD6-201ENST00000288840 CTDSP1Q9GZU7 261 aa13.24□□□□□ -0.29
SMAD6-201ENST00000288840 RAB9BQ9NP90 201 aa13.24□□□□□ -0.29
SMAD6-201ENST00000288840 NKX6-3A6NJ46 265 aa13.24□□□□□ -0.29
SMAD6-201ENST00000288840 FAM90A26D6RGX4 464 aa13.24□□□□□ -0.29
SMAD6-201ENST00000288840 H3BTX0 84 aa13.24□□□□□ -0.29
SMAD6-201ENST00000288840 SPCS3P61009 180 aa13.24□□□□□ -0.29
SMAD6-201ENST00000288840 DUX4L9Q6RFH8 374 aaPredicted RBP13.24□□□□□ -0.29
SMAD6-201ENST00000288840 TPPP3Q9BW30 176 aa13.24□□□□□ -0.29
SMAD6-201ENST00000288840 HSPB7Q9UBY9 170 aa13.24□□□□□ -0.29
SMAD6-201ENST00000288840 OR51B2Q9Y5P1 312 aa13.24□□□□□ -0.29
SMAD6-201ENST00000288840 A0A1B0GV90 55 aa13.23□□□□□ -0.29
SMAD6-201ENST00000288840 OR10J1P30954 320 aa13.23□□□□□ -0.29
SMAD6-201ENST00000288840 OR5I1Q13606 314 aa13.23□□□□□ -0.29
SMAD6-201ENST00000288840 DAZAP2Q15038 168 aaPredicted RBP13.23□□□□□ -0.29
SMAD6-201ENST00000288840 HARBI1Q96MB7 349 aa13.23□□□□□ -0.29
SMAD6-201ENST00000288840 P2RX4Q99571 388 aa13.23□□□□□ -0.29
SMAD6-201ENST00000288840 MGAQ8IWI9 3026 aa13.23□□□□□ -0.29
SMAD6-201ENST00000288840 ZNF883P0CG24 379 aa13.23□□□□□ -0.29
SMAD6-201ENST00000288840 CASP6P55212 293 aa13.23□□□□□ -0.29
SMAD6-201ENST00000288840 RPL31P62899 125 aaKnown RBP13.23□□□□□ -0.29
SMAD6-201ENST00000288840 Q6ZS49 121 aa13.23□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms