RNA–Protein interactions for RNA: ENST00000285681.6

USP25-202, Transcript of ubiquitin specific peptidase 25, humanhuman

TSL 1 (best) BASIC

Gene USP25, Length 5,216 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP25-202ENST00000285681 ZNF436-AS1Q8NC38 126 aaPredicted RBP17.13■□□□□ 0.33
USP25-202ENST00000285681 PATJQ8NI35 1801 aa17.13■□□□□ 0.33
USP25-202ENST00000285681 FBXL15Q9H469 300 aa17.13■□□□□ 0.33
USP25-202ENST00000285681 E9PLN8 166 aa17.13■□□□□ 0.33
USP25-202ENST00000285681 LY6DQ14210 128 aa17.13■□□□□ 0.33
USP25-202ENST00000285681 ZNF660Q6AZW8 331 aaPredicted RBP17.13■□□□□ 0.33
USP25-202ENST00000285681 VKORC1Q9BQB6 163 aa17.13■□□□□ 0.33
USP25-202ENST00000285681 VPS25Q9BRG1 176 aa17.13■□□□□ 0.33
USP25-202ENST00000285681 PRO1933Q9H354 126 aa17.13■□□□□ 0.33
USP25-202ENST00000285681 IL4P05112 153 aa17.12■□□□□ 0.33
USP25-202ENST00000285681 TSPOP30536 169 aa17.12■□□□□ 0.33
USP25-202ENST00000285681 NABP2Q9BQ15 211 aa17.12■□□□□ 0.33
USP25-202ENST00000285681 IGKV3D-15A0A087WSY6 115 aa17.12■□□□□ 0.33
USP25-202ENST00000285681 CRXO43186 299 aaPredicted RBP17.12■□□□□ 0.33
USP25-202ENST00000285681 IGKV3-15P01624 115 aa17.12■□□□□ 0.33
USP25-202ENST00000285681 DHRS11Q6UWP2 260 aa17.12■□□□□ 0.33
USP25-202ENST00000285681 NUP37Q8NFH4 326 aa17.12■□□□□ 0.33
USP25-202ENST00000285681 NPIPB6E9PJ23 425 aa17.12■□□□□ 0.33
USP25-202ENST00000285681 A0A1B0GTI1 187 aa17.11■□□□□ 0.33
USP25-202ENST00000285681 PACRGQ96M98 296 aaPredicted RBP17.11■□□□□ 0.33
USP25-202ENST00000285681 AKAP6Q13023 2319 aa17.11■□□□□ 0.33
USP25-202ENST00000285681 LOC389332A0A1B0GUA5 103 aa17.11■□□□□ 0.33
USP25-202ENST00000285681 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP17.11■□□□□ 0.33
USP25-202ENST00000285681 IGKV1D-33P01593 117 aa17.11■□□□□ 0.33
USP25-202ENST00000285681 IGKV1-33P01594 117 aa17.11■□□□□ 0.33
USP25-202ENST00000285681 ARL14EPLP0DKL9 152 aa17.11■□□□□ 0.33
USP25-202ENST00000285681 FAM3BP58499 235 aaPredicted RBP17.11■□□□□ 0.33
USP25-202ENST00000285681 RELBQ01201 579 aa17.11■□□□□ 0.33
USP25-202ENST00000285681 M0R143 59 aa17.11■□□□□ 0.33
USP25-202ENST00000285681 H2BFSP57053 126 aa17.11■□□□□ 0.33
USP25-202ENST00000285681 SNRPD3P62318 126 aaKnown RBP17.11■□□□□ 0.33
USP25-202ENST00000285681 RTN4RQ9BZR6 473 aa17.11■□□□□ 0.33
USP25-202ENST00000285681 PHLDA3Q9Y5J5 127 aa17.11■□□□□ 0.33
USP25-202ENST00000285681 LINC00312Q9Y6C7 94 aa17.11■□□□□ 0.33
USP25-202ENST00000285681 RALGAPA2Q2PPJ7 1873 aa17.11■□□□□ 0.33
USP25-202ENST00000285681 GATAD1Q8WUU5 269 aa17.11■□□□□ 0.33
USP25-202ENST00000285681 CA2P00918 260 aa17.1■□□□□ 0.33
USP25-202ENST00000285681 MRPL32Q9BYC8 188 aaKnown RBP17.1■□□□□ 0.33
USP25-202ENST00000285681 MTCL1Q9Y4B5 1905 aaKnown RBP17.1■□□□□ 0.33
USP25-202ENST00000285681 SHISA3A0PJX4 238 aa17.1■□□□□ 0.33
USP25-202ENST00000285681 KLK2P20151 261 aa17.1■□□□□ 0.33
USP25-202ENST00000285681 WBP1Q96G27 269 aa17.1■□□□□ 0.33
USP25-202ENST00000285681 SEMA5BQ9P283 1151 aa17.1■□□□□ 0.33
USP25-202ENST00000285681 MT-ND6P03923 174 aa17.1■□□□□ 0.33
USP25-202ENST00000285681 GPX1P07203 203 aa17.1■□□□□ 0.33
USP25-202ENST00000285681 NMBP08949 121 aa17.1■□□□□ 0.33
USP25-202ENST00000285681 CX3CL1P78423 397 aa17.1■□□□□ 0.33
USP25-202ENST00000285681 SRSF9Q13242 221 aaKnown RBP eCLIP17.1■□□□□ 0.33
USP25-202ENST00000285681 MESP1Q9BRJ9 268 aa17.1■□□□□ 0.33
USP25-202ENST00000285681 CBLN4Q9NTU7 201 aa17.1■□□□□ 0.33
USP25-202ENST00000285681 SNRNP200O75643 2136 aaKnown RBP17.1■□□□□ 0.33
USP25-202ENST00000285681 TRPM7Q96QT4 1865 aa17.1■□□□□ 0.33
USP25-202ENST00000285681 PINLYPA6NC86 204 aa17.1■□□□□ 0.33
USP25-202ENST00000285681 PSMB2P49721 201 aa17.1■□□□□ 0.33
USP25-202ENST00000285681 SPRR3Q9UBC9 169 aa17.1■□□□□ 0.33
USP25-202ENST00000285681 OTOFQ9HC10 1997 aa17.1■□□□□ 0.33
USP25-202ENST00000285681 H3BTX0 84 aa17.09■□□□□ 0.33
USP25-202ENST00000285681 MOSP00540 346 aa17.09■□□□□ 0.33
USP25-202ENST00000285681 AMMECR1LQ6DCA0 310 aa17.09■□□□□ 0.33
USP25-202ENST00000285681 C17orf82Q86X59 251 aaPredicted RBP17.09■□□□□ 0.33
USP25-202ENST00000285681 TRAF4Q9BUZ4 470 aaPredicted RBP17.09■□□□□ 0.33
USP25-202ENST00000285681 RPS20P60866 119 aaKnown RBP17.09■□□□□ 0.33
USP25-202ENST00000285681 BET1LQ9NYM9 111 aa17.09■□□□□ 0.33
USP25-202ENST00000285681 CKS2P33552 79 aa17.09■□□□□ 0.33
USP25-202ENST00000285681 ZNF343Q6P1L6 599 aa17.09■□□□□ 0.33
USP25-202ENST00000285681 SPSB4Q96A44 273 aa17.09■□□□□ 0.33
USP25-202ENST00000285681 PQLC2LA1A4F0 135 aa17.08■□□□□ 0.33
USP25-202ENST00000285681 ANOS1P23352 680 aa17.08■□□□□ 0.33
USP25-202ENST00000285681 TMEM177Q53S58 311 aa17.08■□□□□ 0.33
USP25-202ENST00000285681 A0A0G2JLM5 398 aa17.08■□□□□ 0.32
USP25-202ENST00000285681 NPIPB7O75200 414 aa17.08■□□□□ 0.32
USP25-202ENST00000285681 OR4C5Q8NGB2 326 aa17.08■□□□□ 0.32
USP25-202ENST00000285681 PTBP3O95758 552 aaKnown RBP17.08■□□□□ 0.32
USP25-202ENST00000285681 F12P00748 615 aaPredicted RBP17.08■□□□□ 0.32
USP25-202ENST00000285681 CDC42EP3Q9UKI2 254 aa17.08■□□□□ 0.32
USP25-202ENST00000285681 IGHV3OR16-13A0A075B7E8 117 aa17.07■□□□□ 0.32
USP25-202ENST00000285681 IGHV3-74A0A0B4J1X5 117 aa17.07■□□□□ 0.32
USP25-202ENST00000285681 PROB1E7EW31 1015 aa17.07■□□□□ 0.32
USP25-202ENST00000285681 GALNT14Q96FL9 552 aa17.07■□□□□ 0.32
USP25-202ENST00000285681 A0A0G2JMZ2 1700 aa17.07■□□□□ 0.32
USP25-202ENST00000285681 LRRC37A2A6NM11 1700 aa17.07■□□□□ 0.32
USP25-202ENST00000285681 LCTP09848 1927 aa17.07■□□□□ 0.32
USP25-202ENST00000285681 A0A0G2JK05 382 aa17.07■□□□□ 0.32
USP25-202ENST00000285681 CRYBB3P26998 211 aa17.07■□□□□ 0.32
USP25-202ENST00000285681 FAM53AQ6NSI3 398 aaPredicted RBP17.07■□□□□ 0.32
USP25-202ENST00000285681 ANKRD36A6QL64 1941 aa17.07■□□□□ 0.32
USP25-202ENST00000285681 MDC1Q14676 2089 aaKnown RBP17.07■□□□□ 0.32
USP25-202ENST00000285681 ESPL1Q14674 2120 aa17.07■□□□□ 0.32
USP25-202ENST00000285681 UBE2L6O14933 153 aa17.07■□□□□ 0.32
USP25-202ENST00000285681 ACAA1P09110 424 aaPredicted RBP17.07■□□□□ 0.32
USP25-202ENST00000285681 ZNF236Q9UL36 1845 aa17.07■□□□□ 0.32
USP25-202ENST00000285681 FAM181BA6NEQ2 426 aa17.07■□□□□ 0.32
USP25-202ENST00000285681 CD99P14209 185 aa17.07■□□□□ 0.32
USP25-202ENST00000285681 OR4A47Q6IF82 309 aa17.07■□□□□ 0.32
USP25-202ENST00000285681 ELOVL1Q9BW60 279 aa17.07■□□□□ 0.32
USP25-202ENST00000285681 C17orf98A8MV24 154 aa17.06■□□□□ 0.32
USP25-202ENST00000285681 ZIC4Q8N9L1 334 aa17.06■□□□□ 0.32
USP25-202ENST00000285681 PLSCR2Q9NRY7 297 aa17.06■□□□□ 0.32
USP25-202ENST00000285681 FBXL7Q9UJT9 491 aa17.06■□□□□ 0.32
USP25-202ENST00000285681 DOCK6Q96HP0 2047 aa17.06■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms