RNA–Protein interactions for RNA: ENST00000277657.12

CCDC7-201, Transcript of coiled-coil domain containing 7, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC7, Length 1,899 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-201ENST00000277657 PUSL1Q8N0Z8 303 aaKnown RBP17.88■□□□□ 0.45
CCDC7-201ENST00000277657 FLYWCH2Q96CP2 140 aaKnown RBP17.88■□□□□ 0.45
CCDC7-201ENST00000277657 TSNAXQ99598 290 aaKnown RBP17.88■□□□□ 0.45
CCDC7-201ENST00000277657 BPESC1Q9GZL8 116 aa17.88■□□□□ 0.45
CCDC7-201ENST00000277657 ARHGAP32A7KAX9 2087 aa17.88■□□□□ 0.45
CCDC7-201ENST00000277657 FGF2P09038 288 aa17.88■□□□□ 0.45
CCDC7-201ENST00000277657 SAA1P0DJI8 122 aaPredicted RBP17.88■□□□□ 0.45
CCDC7-201ENST00000277657 COX7A1P24310 79 aa17.88■□□□□ 0.45
CCDC7-201ENST00000277657 ZFP36P26651 326 aaKnown RBP17.88■□□□□ 0.45
CCDC7-201ENST00000277657 RAB13P51153 203 aa17.88■□□□□ 0.45
CCDC7-201ENST00000277657 HSPE1P61604 102 aaKnown RBP17.88■□□□□ 0.45
CCDC7-201ENST00000277657 C1orf122Q6ZSJ8 110 aa17.88■□□□□ 0.45
CCDC7-201ENST00000277657 KIR3DL3Q8N743 410 aa17.88■□□□□ 0.45
CCDC7-201ENST00000277657 HARBI1Q96MB7 349 aa17.88■□□□□ 0.45
CCDC7-201ENST00000277657 PRNDQ9UKY0 176 aa17.88■□□□□ 0.45
CCDC7-201ENST00000277657 PNKDQ8N490 385 aa17.87■□□□□ 0.45
CCDC7-201ENST00000277657 OR11H6Q8NGC7 330 aa17.87■□□□□ 0.45
CCDC7-201ENST00000277657 GNPNAT1Q96EK6 184 aaPredicted RBP17.87■□□□□ 0.45
CCDC7-201ENST00000277657 AMMECR1Q9Y4X0 333 aaPredicted RBP17.87■□□□□ 0.45
CCDC7-201ENST00000277657 LY6LH3BQJ8 138 aa17.86■□□□□ 0.45
CCDC7-201ENST00000277657 PRTN3P24158 256 aa17.86■□□□□ 0.45
CCDC7-201ENST00000277657 LMO4P61968 165 aa17.86■□□□□ 0.45
CCDC7-201ENST00000277657 PAX2Q02962 417 aa17.86■□□□□ 0.45
CCDC7-201ENST00000277657 SLC38A11Q08AI6 406 aa17.86■□□□□ 0.45
CCDC7-201ENST00000277657 ZNF257Q9Y2Q1 563 aa17.86■□□□□ 0.45
CCDC7-201ENST00000277657 C15orf62A8K5M9 175 aa17.86■□□□□ 0.45
CCDC7-201ENST00000277657 A8MXK9 166 aa17.86■□□□□ 0.45
CCDC7-201ENST00000277657 IFNA5P01569 189 aa17.86■□□□□ 0.45
CCDC7-201ENST00000277657 PDLIM4P50479 330 aa17.86■□□□□ 0.45
CCDC7-201ENST00000277657 RAB5CP51148 216 aa17.86■□□□□ 0.45
CCDC7-201ENST00000277657 BLOC1S1P78537 153 aa17.86■□□□□ 0.45
CCDC7-201ENST00000277657 OR8G2PQ6IF36 304 aa17.86■□□□□ 0.45
CCDC7-201ENST00000277657 PARD6GQ9BYG4 376 aaPredicted RBP17.86■□□□□ 0.45
CCDC7-201ENST00000277657 PARP11Q9NR21 331 aa17.86■□□□□ 0.45
CCDC7-201ENST00000277657 UTP20O75691 2785 aaKnown RBP17.86■□□□□ 0.45
CCDC7-201ENST00000277657 ENSAO43768 121 aaKnown RBP17.85■□□□□ 0.45
CCDC7-201ENST00000277657 PXDC1Q5TGL8 231 aa17.85■□□□□ 0.45
CCDC7-201ENST00000277657 LILRB2Q8N423 598 aa17.85■□□□□ 0.45
CCDC7-201ENST00000277657 CLDND2Q8NHS1 167 aa17.85■□□□□ 0.45
CCDC7-201ENST00000277657 CLCC1Q96S66 551 aa17.85■□□□□ 0.45
CCDC7-201ENST00000277657 HIPK2Q9H2X6 1198 aa17.85■□□□□ 0.45
CCDC7-201ENST00000277657 UNKLQ9H9P5 680 aaKnown RBP17.85■□□□□ 0.45
CCDC7-201ENST00000277657 SIRT7Q9NRC8 400 aa17.85■□□□□ 0.45
CCDC7-201ENST00000277657 OR51B2Q9Y5P1 312 aa17.85■□□□□ 0.45
CCDC7-201ENST00000277657 ASH1LQ9NR48 2969 aaKnown RBP17.85■□□□□ 0.45
CCDC7-201ENST00000277657 I3L521 148 aa17.84■□□□□ 0.45
CCDC7-201ENST00000277657 KBTBD11O94819 623 aa17.84■□□□□ 0.45
CCDC7-201ENST00000277657 SCAF4O95104 1147 aaKnown RBP17.84■□□□□ 0.45
CCDC7-201ENST00000277657 ATP6V1FQ16864 119 aa17.84■□□□□ 0.45
CCDC7-201ENST00000277657 TOR2AQ5JU69 321 aa17.84■□□□□ 0.45
CCDC7-201ENST00000277657 HCP5Q6MZN7 132 aa17.84■□□□□ 0.45
CCDC7-201ENST00000277657 MS4A7Q9GZW8 240 aaPredicted RBP17.84■□□□□ 0.45
CCDC7-201ENST00000277657 HEYLQ9NQ87 328 aaPredicted RBP17.84■□□□□ 0.45
CCDC7-201ENST00000277657 RFNGQ9Y644 331 aa17.84■□□□□ 0.45
CCDC7-201ENST00000277657 IGHV1-3A0A0C4DH29 117 aa17.84■□□□□ 0.45
CCDC7-201ENST00000277657 IGLV2-23P01705 113 aa17.84■□□□□ 0.45
CCDC7-201ENST00000277657 RPS16P62249 146 aaKnown RBP17.84■□□□□ 0.45
CCDC7-201ENST00000277657 RPP30P78346 268 aaKnown RBP17.84■□□□□ 0.45
CCDC7-201ENST00000277657 RUNX1Q01196 453 aa17.84■□□□□ 0.45
CCDC7-201ENST00000277657 LRRC75BQ2VPJ9 315 aa17.84■□□□□ 0.45
CCDC7-201ENST00000277657 OR10P1Q8NGE3 313 aa17.84■□□□□ 0.45
CCDC7-201ENST00000277657 OR2G3Q8NGZ4 309 aa17.84■□□□□ 0.45
CCDC7-201ENST00000277657 MARC2Q969Z3 335 aa17.84■□□□□ 0.45
CCDC7-201ENST00000277657 PINX1Q96BK5 328 aaKnown RBP17.84■□□□□ 0.45
CCDC7-201ENST00000277657 FKBP11Q9NYL4 201 aa17.84■□□□□ 0.45
CCDC7-201ENST00000277657 KPTNQ9Y664 436 aa17.84■□□□□ 0.45
CCDC7-201ENST00000277657 LRRK2Q5S007 2527 aa17.83■□□□□ 0.45
CCDC7-201ENST00000277657 OR8U8P0C7N1 319 aa17.83■□□□□ 0.44
CCDC7-201ENST00000277657 OR4A5Q8NH83 315 aa17.83■□□□□ 0.44
CCDC7-201ENST00000277657 LYPD6BQ8NI32 183 aa17.83■□□□□ 0.44
CCDC7-201ENST00000277657 VSTM2AQ8TAG5 236 aa17.83■□□□□ 0.44
CCDC7-201ENST00000277657 INSIG2Q9Y5U4 225 aa17.83■□□□□ 0.44
CCDC7-201ENST00000277657 TNCP24821 2201 aa17.82■□□□□ 0.44
CCDC7-201ENST00000277657 ODF3BA8MYP8 253 aa17.82■□□□□ 0.44
CCDC7-201ENST00000277657 UMAD1C9J7I0 102 aa17.82■□□□□ 0.44
CCDC7-201ENST00000277657 TRIM77I1YAP6 450 aa17.82■□□□□ 0.44
CCDC7-201ENST00000277657 HOXA1P49639 335 aaPredicted RBP17.82■□□□□ 0.44
CCDC7-201ENST00000277657 BTNL8Q6UX41 500 aa17.82■□□□□ 0.44
CCDC7-201ENST00000277657 TMEM182Q6ZP80 229 aaPredicted RBP17.82■□□□□ 0.44
CCDC7-201ENST00000277657 Q6ZRG5 221 aa17.82■□□□□ 0.44
CCDC7-201ENST00000277657 TMEM167AQ8TBQ9 72 aa17.82■□□□□ 0.44
CCDC7-201ENST00000277657 RPEQ96AT9 228 aa17.82■□□□□ 0.44
CCDC7-201ENST00000277657 MMP26Q9NRE1 261 aa17.82■□□□□ 0.44
CCDC7-201ENST00000277657 RAB19A4D1S5 217 aa17.82■□□□□ 0.44
CCDC7-201ENST00000277657 NUDT19A8MXV4 375 aa17.82■□□□□ 0.44
CCDC7-201ENST00000277657 MYOD1P15172 320 aa17.82■□□□□ 0.44
CCDC7-201ENST00000277657 USF1P22415 310 aaPredicted RBP17.82■□□□□ 0.44
CCDC7-201ENST00000277657 LGALS7P47929 136 aa17.82■□□□□ 0.44
CCDC7-201ENST00000277657 PRCDQ00LT1 54 aa17.82■□□□□ 0.44
CCDC7-201ENST00000277657 LDLRAD2Q5SZI1 272 aa17.82■□□□□ 0.44
CCDC7-201ENST00000277657 SLC25A24Q6NUK1 477 aa17.82■□□□□ 0.44
CCDC7-201ENST00000277657 OR5B3Q8NH48 314 aa17.82■□□□□ 0.44
CCDC7-201ENST00000277657 SCGB1C1Q8TD33 95 aa17.82■□□□□ 0.44
CCDC7-201ENST00000277657 WDR61Q9GZS3 305 aaKnown RBP17.82■□□□□ 0.44
CCDC7-201ENST00000277657 IGHV2-70DA0A0C4DH43 119 aa17.81■□□□□ 0.44
CCDC7-201ENST00000277657 TEX50A0A1B0GTY4 177 aa17.81■□□□□ 0.44
CCDC7-201ENST00000277657 COX6B1P14854 86 aa17.81■□□□□ 0.44
CCDC7-201ENST00000277657 LCN2P80188 198 aa17.81■□□□□ 0.44
CCDC7-201ENST00000277657 VWC2Q2TAL6 325 aa17.81■□□□□ 0.44
CCDC7-201ENST00000277657 THNSL2Q86YJ6 484 aa17.81■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms