RNA–Protein interactions for RNA: ENST00000273342.8

COL8A1-202, Transcript of collagen type VIII alpha 1 chain, humanhuman

APPRIS P1 TSL 2 BASIC

Gene COL8A1, Length 3,029 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1-202ENST00000273342 FAM122AQ96E09 287 aa10.76□□□□□ -0.69
COL8A1-202ENST00000273342 MS4A5Q9H3V2 200 aa10.76□□□□□ -0.69
COL8A1-202ENST00000273342 DNAJC4Q9NNZ3 241 aa10.76□□□□□ -0.69
COL8A1-202ENST00000273342 OBP2BQ9NPH6 170 aa10.76□□□□□ -0.69
COL8A1-202ENST00000273342 DIRC3C9JPN6 131 aa10.76□□□□□ -0.69
COL8A1-202ENST00000273342 YPEL1O60688 119 aa10.76□□□□□ -0.69
COL8A1-202ENST00000273342 RAB7AP51149 207 aa10.76□□□□□ -0.69
COL8A1-202ENST00000273342 IL11RAQ14626 422 aa10.76□□□□□ -0.69
COL8A1-202ENST00000273342 MAJINQ3KP22 176 aa10.76□□□□□ -0.69
COL8A1-202ENST00000273342 ERASQ7Z444 233 aa10.76□□□□□ -0.69
COL8A1-202ENST00000273342 PPP1R32Q7Z5V6 425 aa10.76□□□□□ -0.69
COL8A1-202ENST00000273342 ST6GALNAC3Q8NDV1 305 aa10.76□□□□□ -0.69
COL8A1-202ENST00000273342 RCHY1Q96PM5 261 aa10.76□□□□□ -0.69
COL8A1-202ENST00000273342 YPEL2Q96QA6 119 aa10.76□□□□□ -0.69
COL8A1-202ENST00000273342 RTL8AQ9BWD3 113 aa10.76□□□□□ -0.69
COL8A1-202ENST00000273342 RNASE7Q9H1E1 156 aaKnown RBP10.76□□□□□ -0.69
COL8A1-202ENST00000273342 GNB4Q9HAV0 340 aa10.76□□□□□ -0.69
COL8A1-202ENST00000273342 KCNIP2Q9NS61 270 aa10.76□□□□□ -0.69
COL8A1-202ENST00000273342 PRAMEF5Q5TYX0 476 aa10.76□□□□□ -0.69
COL8A1-202ENST00000273342 PRAMEF6Q5VXH4 476 aa10.76□□□□□ -0.69
COL8A1-202ENST00000273342 MRPL54Q6P161 138 aaKnown RBP10.76□□□□□ -0.69
COL8A1-202ENST00000273342 TREML4Q6UXN2 200 aa10.76□□□□□ -0.69
COL8A1-202ENST00000273342 UHRF2Q96PU4 802 aa10.76□□□□□ -0.69
COL8A1-202ENST00000273342 TXN2Q99757 166 aa10.76□□□□□ -0.69
COL8A1-202ENST00000273342 TBL2Q9Y4P3 447 aaKnown RBP10.76□□□□□ -0.69
COL8A1-202ENST00000273342 TPRP12270 2363 aaKnown RBP10.75□□□□□ -0.69
COL8A1-202ENST00000273342 K7ESF4 209 aa10.75□□□□□ -0.69
COL8A1-202ENST00000273342 LINC00596Q86U02 117 aa10.75□□□□□ -0.69
COL8A1-202ENST00000273342 NHLRC2Q8NBF2 726 aa10.75□□□□□ -0.69
COL8A1-202ENST00000273342 SERTAD4Q9NUC0 356 aa10.75□□□□□ -0.69
COL8A1-202ENST00000273342 ARFGEF3Q5TH69 2177 aa10.75□□□□□ -0.69
COL8A1-202ENST00000273342 M0QZK8 103 aa10.75□□□□□ -0.69
COL8A1-202ENST00000273342 TMPRSS2O15393 492 aa10.75□□□□□ -0.69
COL8A1-202ENST00000273342 CADP27708 2225 aa10.75□□□□□ -0.69
COL8A1-202ENST00000273342 CHRNB4P30926 498 aa10.75□□□□□ -0.69
COL8A1-202ENST00000273342 ARR3P36575 388 aa10.75□□□□□ -0.69
COL8A1-202ENST00000273342 MRPS11P82912 194 aaKnown RBP10.75□□□□□ -0.69
COL8A1-202ENST00000273342 SPATA45Q537H7 98 aa10.75□□□□□ -0.69
COL8A1-202ENST00000273342 TEX43Q6ZNM6 134 aa10.75□□□□□ -0.69
COL8A1-202ENST00000273342 MOB1BQ7L9L4 216 aa10.75□□□□□ -0.69
COL8A1-202ENST00000273342 MMD2Q8IY49 270 aa10.75□□□□□ -0.69
COL8A1-202ENST00000273342 OR2M7Q8NG81 312 aa10.75□□□□□ -0.69
COL8A1-202ENST00000273342 OR4P4Q8NGL7 312 aa10.75□□□□□ -0.69
COL8A1-202ENST00000273342 MGST2Q99735 147 aa10.75□□□□□ -0.69
COL8A1-202ENST00000273342 ZNF703Q9H7S9 590 aaPredicted RBP10.75□□□□□ -0.69
COL8A1-202ENST00000273342 GCM1Q9NP62 436 aa10.75□□□□□ -0.69
COL8A1-202ENST00000273342 WDR83OSQ9Y284 106 aa10.75□□□□□ -0.69
COL8A1-202ENST00000273342 MRPS18CQ9Y3D5 142 aaKnown RBP10.75□□□□□ -0.69
COL8A1-202ENST00000273342 LOXL2Q9Y4K0 774 aa10.75□□□□□ -0.69
COL8A1-202ENST00000273342 NPIPB11E5RHQ5 1161 aa10.74□□□□□ -0.69
COL8A1-202ENST00000273342 CA1P00915 261 aaPredicted RBP10.74□□□□□ -0.69
COL8A1-202ENST00000273342 CGAP01215 116 aa10.74□□□□□ -0.69
COL8A1-202ENST00000273342 PLGLB1Q02325 96 aa10.74□□□□□ -0.69
COL8A1-202ENST00000273342 STPG4Q8N801 248 aa10.74□□□□□ -0.69
COL8A1-202ENST00000273342 OR13A1Q8NGR1 328 aa10.74□□□□□ -0.69
COL8A1-202ENST00000273342 MBNL3Q9NUK0 354 aaKnown RBP10.74□□□□□ -0.69
COL8A1-202ENST00000273342 MYOD1P15172 320 aa10.74□□□□□ -0.69
COL8A1-202ENST00000273342 CLDN18P56856 261 aa10.74□□□□□ -0.69
COL8A1-202ENST00000273342 UBE2NP61088 152 aaKnown RBP10.74□□□□□ -0.69
COL8A1-202ENST00000273342 RELQ04864 619 aaPredicted RBP10.74□□□□□ -0.69
COL8A1-202ENST00000273342 LCN12Q6JVE5 192 aa10.74□□□□□ -0.69
COL8A1-202ENST00000273342 Q6ZN92 141 aa10.74□□□□□ -0.69
COL8A1-202ENST00000273342 LEAP2Q969E1 77 aa10.74□□□□□ -0.69
COL8A1-202ENST00000273342 PCED1AQ9H1Q7 454 aa10.74□□□□□ -0.69
COL8A1-202ENST00000273342 CBY1Q9Y3M2 126 aa10.74□□□□□ -0.69
COL8A1-202ENST00000273342 TNCP24821 2201 aa10.74□□□□□ -0.69
COL8A1-202ENST00000273342 TMEM30CPA0ZSE6 113 aa10.74□□□□□ -0.69
COL8A1-202ENST00000273342 GATA2P23769 480 aaPredicted RBP10.74□□□□□ -0.69
COL8A1-202ENST00000273342 COMPP49747 757 aaPredicted RBP10.74□□□□□ -0.69
COL8A1-202ENST00000273342 YPEL3P61236 119 aaPredicted RBP10.74□□□□□ -0.69
COL8A1-202ENST00000273342 C20orf144Q9BQM9 153 aa10.74□□□□□ -0.69
COL8A1-202ENST00000273342 PKIBQ9C010 78 aa10.74□□□□□ -0.69
COL8A1-202ENST00000273342 RIF1Q5UIP0 2472 aaKnown RBP10.73□□□□□ -0.69
COL8A1-202ENST00000273342 ZNF253O75346 499 aa10.73□□□□□ -0.69
COL8A1-202ENST00000273342 IL6RP08887 468 aaPredicted RBP10.73□□□□□ -0.69
COL8A1-202ENST00000273342 P0C879 139 aa10.73□□□□□ -0.69
COL8A1-202ENST00000273342 MGST1P10620 155 aaKnown RBP10.73□□□□□ -0.69
COL8A1-202ENST00000273342 CD99P14209 185 aa10.73□□□□□ -0.69
COL8A1-202ENST00000273342 HINT1P49773 126 aaPredicted RBP10.73□□□□□ -0.69
COL8A1-202ENST00000273342 SUMO1P63165 101 aaKnown RBP10.73□□□□□ -0.69
COL8A1-202ENST00000273342 PAFAH1B2P68402 229 aa10.73□□□□□ -0.69
COL8A1-202ENST00000273342 RPL39P5Q59GN2 51 aa10.73□□□□□ -0.69
COL8A1-202ENST00000273342 TMEM105Q8N8V8 129 aa10.73□□□□□ -0.69
COL8A1-202ENST00000273342 OR4A16Q8NH70 328 aa10.73□□□□□ -0.69
COL8A1-202ENST00000273342 SLC25A40Q8TBP6 338 aa10.73□□□□□ -0.69
COL8A1-202ENST00000273342 STARD4Q96DR4 205 aa10.73□□□□□ -0.69
COL8A1-202ENST00000273342 NRN1Q9NPD7 142 aa10.73□□□□□ -0.69
COL8A1-202ENST00000273342 IL36BQ9NZH7 164 aa10.73□□□□□ -0.69
COL8A1-202ENST00000273342 CACNA1HO95180 2353 aa10.73□□□□□ -0.69
COL8A1-202ENST00000273342 PTPRZ1P23471 2315 aaPredicted RBP10.73□□□□□ -0.69
COL8A1-202ENST00000273342 AHRRA9YTQ3 701 aa10.73□□□□□ -0.69
COL8A1-202ENST00000273342 OR10J4P0C629 311 aa10.73□□□□□ -0.69
COL8A1-202ENST00000273342 CRYBB3P26998 211 aa10.73□□□□□ -0.69
COL8A1-202ENST00000273342 RANP62826 216 aaKnown RBP10.73□□□□□ -0.69
COL8A1-202ENST00000273342 FOXF2Q12947 444 aa10.73□□□□□ -0.69
COL8A1-202ENST00000273342 PQLC2Q6ZP29 291 aa10.73□□□□□ -0.69
COL8A1-202ENST00000273342 GCNT2Q8N0V5 402 aa10.73□□□□□ -0.69
COL8A1-202ENST00000273342 TMEM45BQ96B21 275 aa10.73□□□□□ -0.69
COL8A1-202ENST00000273342 COQ2Q96H96 371 aa10.73□□□□□ -0.69
COL8A1-202ENST00000273342 GGTLC1Q9BX51 225 aa10.73□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms