RNA–Protein interactions for RNA: ENST00000265745.13

VPS41-201, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 2

Gene VPS41, Length 769 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-201ENST00000265745 EIF4EBP1Q13541 118 aaPredicted RBP7.41□□□□□ -1.22
VPS41-201ENST00000265745 CDK10Q15131 360 aa7.41□□□□□ -1.22
VPS41-201ENST00000265745 TATDN3Q17R31 274 aa7.41□□□□□ -1.22
VPS41-201ENST00000265745 ZNF773Q6PK81 442 aa7.41□□□□□ -1.22
VPS41-201ENST00000265745 KCTD9Q7L273 389 aa7.41□□□□□ -1.22
VPS41-201ENST00000265745 MMD2Q8IY49 270 aa7.41□□□□□ -1.22
VPS41-201ENST00000265745 VKORC1L1Q8N0U8 176 aa7.41□□□□□ -1.22
VPS41-201ENST00000265745 TTC9CQ8N5M4 171 aa7.41□□□□□ -1.22
VPS41-201ENST00000265745 ACOT12Q8WYK0 555 aa7.41□□□□□ -1.22
VPS41-201ENST00000265745 SNAPC3Q92966 411 aa7.41□□□□□ -1.22
VPS41-201ENST00000265745 HSD17B10Q99714 261 aaKnown RBP7.41□□□□□ -1.22
VPS41-201ENST00000265745 SPIN2AQ99865 258 aa7.41□□□□□ -1.22
VPS41-201ENST00000265745 SPIN2BQ9BPZ2 258 aa7.41□□□□□ -1.22
VPS41-201ENST00000265745 RNF167Q9H6Y7 350 aa7.41□□□□□ -1.22
VPS41-201ENST00000265745 AKIP1Q9NQ31 210 aa7.41□□□□□ -1.22
VPS41-201ENST00000265745 C19orf73Q9NVV2 129 aa7.41□□□□□ -1.22
VPS41-201ENST00000265745 RHBDL2Q9NX52 303 aa7.41□□□□□ -1.22
VPS41-201ENST00000265745 SIGLEC8Q9NYZ4 499 aa7.41□□□□□ -1.22
VPS41-201ENST00000265745 MRPS7Q9Y2R9 242 aaKnown RBP7.41□□□□□ -1.22
VPS41-201ENST00000265745 TRAV18A0A075B6X5 111 aa7.4□□□□□ -1.22
VPS41-201ENST00000265745 FAM223BA6NKX1 122 aa7.4□□□□□ -1.22
VPS41-201ENST00000265745 H0Y980 276 aa7.4□□□□□ -1.22
VPS41-201ENST00000265745 CREBL2O60519 120 aaPredicted RBP7.4□□□□□ -1.22
VPS41-201ENST00000265745 OR2A4O95047 310 aa7.4□□□□□ -1.22
VPS41-201ENST00000265745 MXD1Q05195 221 aa7.4□□□□□ -1.22
VPS41-201ENST00000265745 ATP5G2Q06055 141 aa7.4□□□□□ -1.22
VPS41-201ENST00000265745 KIR3DS1Q14943 382 aa7.4□□□□□ -1.22
VPS41-201ENST00000265745 RPEL1Q2QD12 228 aa7.4□□□□□ -1.22
VPS41-201ENST00000265745 CT83Q5H943 113 aa7.4□□□□□ -1.22
VPS41-201ENST00000265745 OR2B11Q5JQS5 317 aa7.4□□□□□ -1.22
VPS41-201ENST00000265745 C10orf55Q5SWW7 151 aa7.4□□□□□ -1.22
VPS41-201ENST00000265745 FAM223AQ8IWN6 122 aa7.4□□□□□ -1.22
VPS41-201ENST00000265745 NECAP1Q8NC96 275 aa7.4□□□□□ -1.22
VPS41-201ENST00000265745 OR5H6Q8NGV6 325 aa7.4□□□□□ -1.22
VPS41-201ENST00000265745 SLC25A38Q96DW6 304 aa7.4□□□□□ -1.22
VPS41-201ENST00000265745 OR2A7Q96R45 310 aa7.4□□□□□ -1.22
VPS41-201ENST00000265745 THAP7Q9BT49 309 aaPredicted RBP7.4□□□□□ -1.22
VPS41-201ENST00000265745 SPATA2Q9UM82 520 aa7.4□□□□□ -1.22
VPS41-201ENST00000265745 ETV7Q9Y603 341 aa7.4□□□□□ -1.22
VPS41-201ENST00000265745 RYR3Q15413 4870 aa7.4□□□□□ -1.22
VPS41-201ENST00000265745 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP7.39□□□□□ -1.23
VPS41-201ENST00000265745 A0A0A6YYH2 397 aa7.39□□□□□ -1.23
VPS41-201ENST00000265745 LOC100506127A0A0U1RQW1 187 aa7.39□□□□□ -1.23
VPS41-201ENST00000265745 HMX3A6NHT5 357 aa7.39□□□□□ -1.23
VPS41-201ENST00000265745 A6NJ64 397 aa7.39□□□□□ -1.23
VPS41-201ENST00000265745 TEX22C9J3V5 150 aa7.39□□□□□ -1.23
VPS41-201ENST00000265745 E7EUB6 86 aa7.39□□□□□ -1.23
VPS41-201ENST00000265745 BMPR1BO00238 502 aa7.39□□□□□ -1.23
VPS41-201ENST00000265745 IL6RP08887 468 aaPredicted RBP7.39□□□□□ -1.23
VPS41-201ENST00000265745 PTHLHP12272 177 aa7.39□□□□□ -1.23
VPS41-201ENST00000265745 FCGR2CP31995 323 aa7.39□□□□□ -1.23
VPS41-201ENST00000265745 MSMO1Q15800 293 aa7.39□□□□□ -1.23
VPS41-201ENST00000265745 TOR2AQ5JU69 321 aa7.39□□□□□ -1.23
VPS41-201ENST00000265745 IDNKQ5T6J7 187 aa7.39□□□□□ -1.23
VPS41-201ENST00000265745 ZNF66Q6ZN08 573 aa7.39□□□□□ -1.23
VPS41-201ENST00000265745 HOGA1Q86XE5 327 aa7.39□□□□□ -1.23
VPS41-201ENST00000265745 PUSL1Q8N0Z8 303 aaKnown RBP7.39□□□□□ -1.23
VPS41-201ENST00000265745 GVQW1Q8N7I0 195 aa7.39□□□□□ -1.23
VPS41-201ENST00000265745 BEST4Q8NFU0 473 aa7.39□□□□□ -1.23
VPS41-201ENST00000265745 OR4S2Q8NH73 311 aa7.39□□□□□ -1.23
VPS41-201ENST00000265745 VSTM2AQ8TAG5 236 aa7.39□□□□□ -1.23
VPS41-201ENST00000265745 MUC7Q8TAX7 377 aa7.39□□□□□ -1.23
VPS41-201ENST00000265745 TMEM167AQ8TBQ9 72 aa7.39□□□□□ -1.23
VPS41-201ENST00000265745 TCTEX1D2Q8WW35 142 aa7.39□□□□□ -1.23
VPS41-201ENST00000265745 GPHA2Q96T91 129 aa7.39□□□□□ -1.23
VPS41-201ENST00000265745 TM2D3Q9BRN9 247 aa7.39□□□□□ -1.23
VPS41-201ENST00000265745 SLC2A9Q9NRM0 540 aa7.39□□□□□ -1.23
VPS41-201ENST00000265745 TAS2R8Q9NYW2 309 aa7.39□□□□□ -1.23
VPS41-201ENST00000265745 DMRT1Q9Y5R6 373 aa7.39□□□□□ -1.23
VPS41-201ENST00000265745 A0A1B0GW64 132 aa7.38□□□□□ -1.23
VPS41-201ENST00000265745 AIREO43918 545 aa7.38□□□□□ -1.23
VPS41-201ENST00000265745 TMEM127O75204 238 aa7.38□□□□□ -1.23
VPS41-201ENST00000265745 OR2J3O76001 311 aa7.38□□□□□ -1.23
VPS41-201ENST00000265745 KBTBD11O94819 623 aa7.38□□□□□ -1.23
VPS41-201ENST00000265745 H2AFB1P0C5Y9 115 aa7.38□□□□□ -1.23
VPS41-201ENST00000265745 H2AFB2P0C5Z0 115 aa7.38□□□□□ -1.23
VPS41-201ENST00000265745 ZNF735P0CB33 412 aa7.38□□□□□ -1.23
VPS41-201ENST00000265745 MAS1LP35410 378 aa7.38□□□□□ -1.23
VPS41-201ENST00000265745 EXOSC2Q13868 293 aaKnown RBP7.38□□□□□ -1.23
VPS41-201ENST00000265745 NEDD8Q15843 81 aa7.38□□□□□ -1.23
VPS41-201ENST00000265745 C15orf32Q32M92 178 aa7.38□□□□□ -1.23
VPS41-201ENST00000265745 CASC10Q5T4H9 136 aa7.38□□□□□ -1.23
VPS41-201ENST00000265745 ADAMTSL5Q6ZMM2 481 aa7.38□□□□□ -1.23
VPS41-201ENST00000265745 SLC25A42Q86VD7 318 aa7.38□□□□□ -1.23
VPS41-201ENST00000265745 SGPP2Q8IWX5 399 aa7.38□□□□□ -1.23
VPS41-201ENST00000265745 ZBTB34Q8NCN2 500 aa7.38□□□□□ -1.23
VPS41-201ENST00000265745 AUNIPQ9H7T9 357 aa7.38□□□□□ -1.23
VPS41-201ENST00000265745 DIABLOQ9NR28 239 aa7.38□□□□□ -1.23
VPS41-201ENST00000265745 CCL28Q9NRJ3 127 aa7.38□□□□□ -1.23
VPS41-201ENST00000265745 PEMTQ9UBM1 199 aa7.38□□□□□ -1.23
VPS41-201ENST00000265745 ZNF257Q9Y2Q1 563 aa7.38□□□□□ -1.23
VPS41-201ENST00000265745 TNCP24821 2201 aa7.37□□□□□ -1.23
VPS41-201ENST00000265745 IZUMO1RA6ND01 250 aa7.37□□□□□ -1.23
VPS41-201ENST00000265745 NPIPB5A8MRT5 1133 aa7.37□□□□□ -1.23
VPS41-201ENST00000265745 RBFOX2O43251 390 aaKnown RBP eCLIP7.37□□□□□ -1.23
VPS41-201ENST00000265745 HRASP01112 189 aa7.37□□□□□ -1.23
VPS41-201ENST00000265745 PPYP01298 95 aa7.37□□□□□ -1.23
VPS41-201ENST00000265745 CRYGCP07315 174 aa7.37□□□□□ -1.23
VPS41-201ENST00000265745 AREGP15514 252 aa7.37□□□□□ -1.23
VPS41-201ENST00000265745 RPL27AP46776 148 aaKnown RBP7.37□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms