RNA–Protein interactions for RNA: ENST00000263897.9

USE1-201, Transcript of unconventional SNARE in the ER 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene USE1, Length 843 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USE1-201ENST00000263897 NCS1P62166 190 aa12.3□□□□□ -0.44
USE1-201ENST00000263897 RHOGP84095 191 aa12.3□□□□□ -0.44
USE1-201ENST00000263897 ZNF45Q02386 682 aa12.3□□□□□ -0.44
USE1-201ENST00000263897 ATP5G2Q06055 141 aa12.3□□□□□ -0.44
USE1-201ENST00000263897 SSX9Q7RTT3 188 aa12.3□□□□□ -0.44
USE1-201ENST00000263897 SLC25A42Q86VD7 318 aa12.3□□□□□ -0.44
USE1-201ENST00000263897 FAM223AQ8IWN6 122 aa12.3□□□□□ -0.44
USE1-201ENST00000263897 ANAPC10Q9UM13 185 aa12.3□□□□□ -0.44
USE1-201ENST00000263897 TEX22C9J3V5 150 aa12.29□□□□□ -0.44
USE1-201ENST00000263897 SULT1C2O00338 296 aa12.29□□□□□ -0.44
USE1-201ENST00000263897 IGLV1-51P01701 117 aa12.29□□□□□ -0.44
USE1-201ENST00000263897 GNRHRP30968 328 aa12.29□□□□□ -0.44
USE1-201ENST00000263897 RPL27AP46776 148 aaKnown RBP12.29□□□□□ -0.44
USE1-201ENST00000263897 SYNJ2BPP57105 145 aa12.29□□□□□ -0.44
USE1-201ENST00000263897 VBP1P61758 197 aa12.29□□□□□ -0.44
USE1-201ENST00000263897 CATR1Q13166 79 aa12.29□□□□□ -0.44
USE1-201ENST00000263897 TATDN3Q17R31 274 aa12.29□□□□□ -0.44
USE1-201ENST00000263897 IL34Q6ZMJ4 242 aa12.29□□□□□ -0.44
USE1-201ENST00000263897 ZNF818PQ6ZRF7 136 aa12.29□□□□□ -0.44
USE1-201ENST00000263897 NECAP1Q8NC96 275 aa12.29□□□□□ -0.44
USE1-201ENST00000263897 OR9G4Q8NGQ1 327 aa12.29□□□□□ -0.44
USE1-201ENST00000263897 CMTM3Q96MX0 182 aa12.29□□□□□ -0.44
USE1-201ENST00000263897 SLC2A9Q9NRM0 540 aa12.29□□□□□ -0.44
USE1-201ENST00000263897 BET1LQ9NYM9 111 aa12.29□□□□□ -0.44
USE1-201ENST00000263897 EHFQ9NZC4 300 aa12.29□□□□□ -0.44
USE1-201ENST00000263897 COMMD3Q9UBI1 195 aa12.29□□□□□ -0.44
USE1-201ENST00000263897 SMIM31A0A1B0GVY4 71 aa12.28□□□□□ -0.44
USE1-201ENST00000263897 A0A1B0GW64 132 aa12.28□□□□□ -0.44
USE1-201ENST00000263897 HPRT1P00492 218 aa12.28□□□□□ -0.44
USE1-201ENST00000263897 EIF4EP06730 217 aaKnown RBP12.28□□□□□ -0.44
USE1-201ENST00000263897 ZNF735P0CB33 412 aa12.28□□□□□ -0.44
USE1-201ENST00000263897 HERV-K104P61576 105 aa12.28□□□□□ -0.44
USE1-201ENST00000263897 RPL8P62917 257 aaKnown RBP12.28□□□□□ -0.44
USE1-201ENST00000263897 RPEL1Q2QD12 228 aa12.28□□□□□ -0.44
USE1-201ENST00000263897 OR4A47Q6IF82 309 aa12.28□□□□□ -0.44
USE1-201ENST00000263897 TMEM17Q86X19 198 aa12.28□□□□□ -0.44
USE1-201ENST00000263897 ANKRD13BQ86YJ7 626 aa12.28□□□□□ -0.44
USE1-201ENST00000263897 LYSMD2Q8IV50 215 aa12.28□□□□□ -0.44
USE1-201ENST00000263897 OR4A5Q8NH83 315 aa12.28□□□□□ -0.44
USE1-201ENST00000263897 BORCS5Q969J3 196 aa12.28□□□□□ -0.44
USE1-201ENST00000263897 FYTTD1Q96QD9 318 aaKnown RBP12.28□□□□□ -0.44
USE1-201ENST00000263897 ASCL2Q99929 193 aa12.28□□□□□ -0.44
USE1-201ENST00000263897 RSRP1Q9BUV0 290 aa12.28□□□□□ -0.44
USE1-201ENST00000263897 ADAM30Q9UKF2 790 aa12.28□□□□□ -0.44
USE1-201ENST00000263897 ZNF257Q9Y2Q1 563 aa12.28□□□□□ -0.44
USE1-201ENST00000263897 DNAH9Q9NYC9 4486 aa12.27□□□□□ -0.45
USE1-201ENST00000263897 NPIPB5A8MRT5 1133 aa12.27□□□□□ -0.45
USE1-201ENST00000263897 APOA1P02647 267 aa12.27□□□□□ -0.45
USE1-201ENST00000263897 PMP2P02689 132 aa12.27□□□□□ -0.45
USE1-201ENST00000263897 TAS2R31P59538 309 aa12.27□□□□□ -0.45
USE1-201ENST00000263897 TAS2R46P59540 309 aa12.27□□□□□ -0.45
USE1-201ENST00000263897 EXOSC2Q13868 293 aaKnown RBP12.27□□□□□ -0.45
USE1-201ENST00000263897 POU2AF1Q16633 256 aa12.27□□□□□ -0.45
USE1-201ENST00000263897 HAPLN4Q86UW8 402 aa12.27□□□□□ -0.45
USE1-201ENST00000263897 OR5H2Q8NGV7 314 aa12.27□□□□□ -0.45
USE1-201ENST00000263897 CD300LFQ8TDQ1 290 aa12.27□□□□□ -0.45
USE1-201ENST00000263897 WWC2-AS2Q96NR7 200 aa12.27□□□□□ -0.45
USE1-201ENST00000263897 ZNF2Q9BSG1 426 aaPredicted RBP12.27□□□□□ -0.45
USE1-201ENST00000263897 U3KQK5 164 aa12.27□□□□□ -0.45
USE1-201ENST00000263897 STAB2Q8WWQ8 2551 aa12.27□□□□□ -0.45
USE1-201ENST00000263897 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP12.26□□□□□ -0.45
USE1-201ENST00000263897 DPPA5A6NC42 116 aa12.26□□□□□ -0.45
USE1-201ENST00000263897 BMPR1BO00238 502 aa12.26□□□□□ -0.45
USE1-201ENST00000263897 OR2J3O76001 311 aa12.26□□□□□ -0.45
USE1-201ENST00000263897 CRYGCP07315 174 aa12.26□□□□□ -0.45
USE1-201ENST00000263897 MYOD1P15172 320 aa12.26□□□□□ -0.45
USE1-201ENST00000263897 NQO2P16083 231 aa12.26□□□□□ -0.45
USE1-201ENST00000263897 HLA-GP17693 338 aa12.26□□□□□ -0.45
USE1-201ENST00000263897 C15orf32Q32M92 178 aa12.26□□□□□ -0.45
USE1-201ENST00000263897 AADACL3Q5VUY0 350 aa12.26□□□□□ -0.45
USE1-201ENST00000263897 OR6F1Q8NGZ6 308 aa12.26□□□□□ -0.45
USE1-201ENST00000263897 OR51H1Q8NH63 302 aa12.26□□□□□ -0.45
USE1-201ENST00000263897 GPX8Q8TED1 209 aa12.26□□□□□ -0.45
USE1-201ENST00000263897 MOB3AQ96BX8 217 aa12.26□□□□□ -0.45
USE1-201ENST00000263897 PLEKHA2Q9HB19 425 aa12.26□□□□□ -0.45
USE1-201ENST00000263897 HRASLSQ9HDD0 168 aa12.26□□□□□ -0.45
USE1-201ENST00000263897 SIGLEC8Q9NYZ4 499 aa12.26□□□□□ -0.45
USE1-201ENST00000263897 FBXL7Q9UJT9 491 aa12.26□□□□□ -0.45
USE1-201ENST00000263897 CGB1A6NKQ9 187 aa12.25□□□□□ -0.45
USE1-201ENST00000263897 UPK2O00526 184 aa12.25□□□□□ -0.45
USE1-201ENST00000263897 PGLYRP1O75594 196 aaPredicted RBP12.25□□□□□ -0.45
USE1-201ENST00000263897 CSN3P07498 182 aa12.25□□□□□ -0.45
USE1-201ENST00000263897 AREGP15514 252 aa12.25□□□□□ -0.45
USE1-201ENST00000263897 ELK1P19419 428 aa12.25□□□□□ -0.45
USE1-201ENST00000263897 HLA-DMAP28067 261 aa12.25□□□□□ -0.45
USE1-201ENST00000263897 PSMB6P28072 239 aa12.25□□□□□ -0.45
USE1-201ENST00000263897 RORCP51449 518 aa12.25□□□□□ -0.45
USE1-201ENST00000263897 KLK9Q2XQG4 91 aa12.25□□□□□ -0.45
USE1-201ENST00000263897 FAM209BQ5JX69 171 aa12.25□□□□□ -0.45
USE1-201ENST00000263897 C19orf35Q6ZS72 473 aa12.25□□□□□ -0.45
USE1-201ENST00000263897 Q8N1Y9 231 aa12.25□□□□□ -0.45
USE1-201ENST00000263897 FANCD2OSQ96PS1 177 aa12.25□□□□□ -0.45
USE1-201ENST00000263897 SCPEP1Q9HB40 452 aa12.25□□□□□ -0.45
USE1-201ENST00000263897 KLK9Q9UKQ9 250 aa12.25□□□□□ -0.45
USE1-201ENST00000263897 DMRT1Q9Y5R6 373 aa12.25□□□□□ -0.45
USE1-201ENST00000263897 TRAV3A0A0B4J244 114 aa12.24□□□□□ -0.45
USE1-201ENST00000263897 H0Y980 276 aa12.24□□□□□ -0.45
USE1-201ENST00000263897 HPGDSO60760 199 aa12.24□□□□□ -0.45
USE1-201ENST00000263897 DHFRP00374 187 aa12.24□□□□□ -0.45
USE1-201ENST00000263897 CTRB1P17538 263 aa12.24□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 66.6 ms