RNA–Protein interactions for RNA: ENST00000263274.11

LIG1-201, Transcript of DNA ligase 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LIG1, Length 3,384 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-201ENST00000263274 TMEM18Q96B42 140 aa10.57□□□□□ -0.72
LIG1-201ENST00000263274 COQ2Q96H96 371 aa10.57□□□□□ -0.72
LIG1-201ENST00000263274 PIEZO2Q9H5I5 2752 aa10.57□□□□□ -0.72
LIG1-201ENST00000263274 GRIFINA4D1Z8 144 aa10.56□□□□□ -0.72
LIG1-201ENST00000263274 FAM90A26D6RGX4 464 aa10.56□□□□□ -0.72
LIG1-201ENST00000263274 DLL1O00548 723 aa10.56□□□□□ -0.72
LIG1-201ENST00000263274 MLNRO43193 412 aa10.56□□□□□ -0.72
LIG1-201ENST00000263274 KITLGP21583 273 aa10.56□□□□□ -0.72
LIG1-201ENST00000263274 TDGF1P3P51864 188 aa10.56□□□□□ -0.72
LIG1-201ENST00000263274 GNB2P62879 340 aa10.56□□□□□ -0.72
LIG1-201ENST00000263274 ZNF146Q15072 292 aa10.56□□□□□ -0.72
LIG1-201ENST00000263274 TAAR6Q96RI8 345 aa10.56□□□□□ -0.72
LIG1-201ENST00000263274 HIPK2Q9H2X6 1198 aa10.56□□□□□ -0.72
LIG1-201ENST00000263274 MANBALQ9NQG1 85 aa10.56□□□□□ -0.72
LIG1-201ENST00000263274 MBNL3Q9NUK0 354 aaKnown RBP10.56□□□□□ -0.72
LIG1-201ENST00000263274 TMEM250H0YL14 139 aa10.56□□□□□ -0.72
LIG1-201ENST00000263274 CLDN14O95500 239 aa10.56□□□□□ -0.72
LIG1-201ENST00000263274 OR9G9P0C7N8 305 aa10.56□□□□□ -0.72
LIG1-201ENST00000263274 VWA1Q6PCB0 445 aa10.56□□□□□ -0.72
LIG1-201ENST00000263274 F6UZH7 168 aa10.56□□□□□ -0.72
LIG1-201ENST00000263274 FAM201AQ5SY85 155 aa10.56□□□□□ -0.72
LIG1-201ENST00000263274 GCM1Q9NP62 436 aa10.56□□□□□ -0.72
LIG1-201ENST00000263274 AQP7O14520 342 aa10.55□□□□□ -0.72
LIG1-201ENST00000263274 SS18L1O75177 396 aaPredicted RBP10.55□□□□□ -0.72
LIG1-201ENST00000263274 ERVK11-1P61568 191 aa10.55□□□□□ -0.72
LIG1-201ENST00000263274 SP5Q6BEB4 398 aaPredicted RBP10.55□□□□□ -0.72
LIG1-201ENST00000263274 TEX38Q6PEX7 206 aa10.55□□□□□ -0.72
LIG1-201ENST00000263274 ZNRF1Q8ND25 227 aa10.55□□□□□ -0.72
LIG1-201ENST00000263274 RNF24Q9Y225 148 aa10.55□□□□□ -0.72
LIG1-201ENST00000263274 WIPI2Q9Y4P8 454 aa10.55□□□□□ -0.72
LIG1-201ENST00000263274 ARL14EPLP0DKL9 152 aa10.55□□□□□ -0.72
LIG1-201ENST00000263274 FOXF2Q12947 444 aa10.55□□□□□ -0.72
LIG1-201ENST00000263274 RNF151Q2KHN1 245 aa10.55□□□□□ -0.72
LIG1-201ENST00000263274 SMIM21Q3B7S5 101 aa10.55□□□□□ -0.72
LIG1-201ENST00000263274 HES3Q5TGS1 186 aa10.55□□□□□ -0.72
LIG1-201ENST00000263274 TMEM178AQ8NBL3 297 aa10.55□□□□□ -0.72
LIG1-201ENST00000263274 IMMP2LQ96T52 175 aa10.55□□□□□ -0.72
LIG1-201ENST00000263274 YLPM1P49750 1951 aaKnown RBP10.55□□□□□ -0.72
LIG1-201ENST00000263274 TRAV3A0A0B4J244 114 aa10.54□□□□□ -0.72
LIG1-201ENST00000263274 RRHO14718 337 aa10.54□□□□□ -0.72
LIG1-201ENST00000263274 SIAH2O43255 324 aa10.54□□□□□ -0.72
LIG1-201ENST00000263274 ZNF90Q03938 601 aa10.54□□□□□ -0.72
LIG1-201ENST00000263274 IQCJQ1A5X6 159 aa10.54□□□□□ -0.72
LIG1-201ENST00000263274 ACP7Q6ZNF0 438 aa10.54□□□□□ -0.72
LIG1-201ENST00000263274 CXXC4Q9H2H0 198 aa10.54□□□□□ -0.72
LIG1-201ENST00000263274 ZDHHC11Q9H8X9 412 aa10.54□□□□□ -0.72
LIG1-201ENST00000263274 ENY2Q9NPA8 101 aa10.54□□□□□ -0.72
LIG1-201ENST00000263274 NPIPB11E5RHQ5 1161 aa10.54□□□□□ -0.72
LIG1-201ENST00000263274 RAB29O14966 203 aa10.54□□□□□ -0.72
LIG1-201ENST00000263274 NPPCP23582 126 aa10.54□□□□□ -0.72
LIG1-201ENST00000263274 TFPI2P48307 235 aa10.54□□□□□ -0.72
LIG1-201ENST00000263274 CNN1P51911 297 aaKnown RBP10.54□□□□□ -0.72
LIG1-201ENST00000263274 GNB1P62873 340 aa10.54□□□□□ -0.72
LIG1-201ENST00000263274 ZNF718Q3SXZ3 478 aa10.54□□□□□ -0.72
LIG1-201ENST00000263274 ZNF114Q8NC26 417 aa10.54□□□□□ -0.72
LIG1-201ENST00000263274 ANAPC16Q96DE5 110 aa10.54□□□□□ -0.72
LIG1-201ENST00000263274 NCOR1P1Q9H4R4 102 aa10.54□□□□□ -0.72
LIG1-201ENST00000263274 J3QW42 95 aa10.54□□□□□ -0.72
LIG1-201ENST00000263274 SPRY3O43610 288 aa10.54□□□□□ -0.72
LIG1-201ENST00000263274 IL3RAP26951 378 aa10.54□□□□□ -0.72
LIG1-201ENST00000263274 CD82P27701 267 aa10.54□□□□□ -0.72
LIG1-201ENST00000263274 PRDX2P32119 198 aa10.54□□□□□ -0.72
LIG1-201ENST00000263274 BRWD1-AS2P59051 145 aa10.54□□□□□ -0.72
LIG1-201ENST00000263274 SRSF6Q13247 344 aaKnown RBP10.54□□□□□ -0.72
LIG1-201ENST00000263274 WDR82Q6UXN9 313 aa10.54□□□□□ -0.72
LIG1-201ENST00000263274 TMEM256Q8N2U0 113 aa10.54□□□□□ -0.72
LIG1-201ENST00000263274 ZBTB34Q8NCN2 500 aa10.54□□□□□ -0.72
LIG1-201ENST00000263274 S1PR3Q99500 378 aa10.54□□□□□ -0.72
LIG1-201ENST00000263274 GP6Q9HCN6 339 aa10.54□□□□□ -0.72
LIG1-201ENST00000263274 OR6C3Q9NZP0 311 aa10.54□□□□□ -0.72
LIG1-201ENST00000263274 TIMM9Q9Y5J7 89 aa10.54□□□□□ -0.72
LIG1-201ENST00000263274 NCOR2Q9Y618 2525 aa10.54□□□□□ -0.72
LIG1-201ENST00000263274 C21orf140B9A014 251 aa10.53□□□□□ -0.72
LIG1-201ENST00000263274 SLC17A3O00476 420 aa10.53□□□□□ -0.72
LIG1-201ENST00000263274 ERVFC1-1P60608 527 aa10.53□□□□□ -0.72
LIG1-201ENST00000263274 SLC35B1P78383 322 aa10.53□□□□□ -0.72
LIG1-201ENST00000263274 DNLZQ5SXM8 178 aa10.53□□□□□ -0.72
LIG1-201ENST00000263274 DIRC2Q96SL1 478 aa10.53□□□□□ -0.72
LIG1-201ENST00000263274 PXMP4Q9Y6I8 212 aa10.53□□□□□ -0.72
LIG1-201ENST00000263274 SCO2A0A1W2PP80 73 aa10.53□□□□□ -0.72
LIG1-201ENST00000263274 NKX2-8O15522 239 aa10.53□□□□□ -0.72
LIG1-201ENST00000263274 ZNF83P51522 516 aa10.53□□□□□ -0.72
LIG1-201ENST00000263274 SLC35E4Q6ICL7 350 aa10.53□□□□□ -0.72
LIG1-201ENST00000263274 FAM214BQ7L5A3 538 aa10.53□□□□□ -0.72
LIG1-201ENST00000263274 GMPPAQ96IJ6 420 aaPredicted RBP10.53□□□□□ -0.72
LIG1-201ENST00000263274 ASCL3Q9NQ33 180 aa10.53□□□□□ -0.72
LIG1-201ENST00000263274 CHTOPQ9Y3Y2 248 aaKnown RBP10.53□□□□□ -0.72
LIG1-201ENST00000263274 SPTAN1Q13813 2472 aaKnown RBP10.53□□□□□ -0.72
LIG1-201ENST00000263274 MGAQ8IWI9 3026 aa10.53□□□□□ -0.72
LIG1-201ENST00000263274 GCGP01275 180 aa10.52□□□□□ -0.72
LIG1-201ENST00000263274 MS4A10Q96PG2 267 aa10.52□□□□□ -0.72
LIG1-201ENST00000263274 HSD17B10Q99714 261 aaKnown RBP10.52□□□□□ -0.72
LIG1-201ENST00000263274 MS4A5Q9H3V2 200 aa10.52□□□□□ -0.72
LIG1-201ENST00000263274 C15orf62A8K5M9 175 aa10.52□□□□□ -0.73
LIG1-201ENST00000263274 IQCF6A8MYZ5 107 aa10.52□□□□□ -0.73
LIG1-201ENST00000263274 MYOD1P15172 320 aa10.52□□□□□ -0.73
LIG1-201ENST00000263274 GABRA6Q16445 453 aa10.52□□□□□ -0.73
LIG1-201ENST00000263274 FAM122AQ96E09 287 aa10.52□□□□□ -0.73
LIG1-201ENST00000263274 RPH3ALQ9UNE2 315 aa10.52□□□□□ -0.73
LIG1-201ENST00000263274 A6NJY4 79 aa10.52□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 267.6 ms