RNA–Protein interactions for RNA: ENST00000262539.7

PTPN3-201, Transcript of protein tyrosine phosphatase, non-receptor type 3, humanhuman

TSL 5 BASIC

Gene PTPN3, Length 6,832 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN3-201ENST00000262539 SLC7A5P1Q8MH63 180 aa6.95□□□□□ -1.3
PTPN3-201ENST00000262539 OSR1Q8TAX0 266 aaPredicted RBP6.95□□□□□ -1.3
PTPN3-201ENST00000262539 TMEM186Q96B77 213 aa6.95□□□□□ -1.3
PTPN3-201ENST00000262539 SNRNP40Q96DI7 357 aaKnown RBP6.95□□□□□ -1.3
PTPN3-201ENST00000262539 OR5AC1P0C628 307 aa6.94□□□□□ -1.3
PTPN3-201ENST00000262539 FAM53AQ6NSI3 398 aaPredicted RBP6.94□□□□□ -1.3
PTPN3-201ENST00000262539 MRPL30Q8TCC3 161 aaKnown RBP6.94□□□□□ -1.3
PTPN3-201ENST00000262539 ACACBO00763 2458 aa6.94□□□□□ -1.3
PTPN3-201ENST00000262539 TMEM131Q92545 1883 aa6.94□□□□□ -1.3
PTPN3-201ENST00000262539 APOBEC3AP31941 199 aaPredicted RBP6.94□□□□□ -1.3
PTPN3-201ENST00000262539 ATP1A1-AS1Q5TC04 95 aa6.94□□□□□ -1.3
PTPN3-201ENST00000262539 WDR25Q64LD2 544 aaPredicted RBP6.94□□□□□ -1.3
PTPN3-201ENST00000262539 C1QL2Q7Z5L3 287 aa6.94□□□□□ -1.3
PTPN3-201ENST00000262539 PRNTQ86SH4 94 aa6.94□□□□□ -1.3
PTPN3-201ENST00000262539 SMIM8Q96KF7 97 aa6.94□□□□□ -1.3
PTPN3-201ENST00000262539 NAT8BQ9UHF3 227 aa6.94□□□□□ -1.3
PTPN3-201ENST00000262539 SNRNP200O75643 2136 aaKnown RBP6.94□□□□□ -1.3
PTPN3-201ENST00000262539 SVILO95425 2214 aa6.94□□□□□ -1.3
PTPN3-201ENST00000262539 A0A1W2PNU3 283 aaPredicted RBP6.94□□□□□ -1.3
PTPN3-201ENST00000262539 TWIST1Q15672 202 aa6.94□□□□□ -1.3
PTPN3-201ENST00000262539 RNF5Q99942 180 aa6.94□□□□□ -1.3
PTPN3-201ENST00000262539 HIGD1AQ9Y241 93 aa6.94□□□□□ -1.3
PTPN3-201ENST00000262539 LINC00312Q9Y6C7 94 aa6.94□□□□□ -1.3
PTPN3-201ENST00000262539 NMBP08949 121 aa6.94□□□□□ -1.3
PTPN3-201ENST00000262539 AESQ08117 197 aa6.94□□□□□ -1.3
PTPN3-201ENST00000262539 TMEM255AQ5JRV8 349 aa6.94□□□□□ -1.3
PTPN3-201ENST00000262539 OOSP1A8MZH6 123 aa6.94□□□□□ -1.3
PTPN3-201ENST00000262539 SYNGR1O43759 233 aa6.94□□□□□ -1.3
PTPN3-201ENST00000262539 TNFSF13O75888 250 aa6.94□□□□□ -1.3
PTPN3-201ENST00000262539 IGKV3-20P01619 116 aa6.94□□□□□ -1.3
PTPN3-201ENST00000262539 ZP3P21754 424 aa6.94□□□□□ -1.3
PTPN3-201ENST00000262539 H2BFSP57053 126 aa6.94□□□□□ -1.3
PTPN3-201ENST00000262539 MYOZ3Q8TDC0 251 aa6.94□□□□□ -1.3
PTPN3-201ENST00000262539 OR51B2Q9Y5P1 312 aa6.94□□□□□ -1.3
PTPN3-201ENST00000262539 MFSD2BA6NFX1 497 aa6.93□□□□□ -1.3
PTPN3-201ENST00000262539 KIAA1324LA8MWY0 1029 aaPredicted RBP6.93□□□□□ -1.3
PTPN3-201ENST00000262539 SULT1A2P50226 295 aa6.93□□□□□ -1.3
PTPN3-201ENST00000262539 ZNF660Q6AZW8 331 aaPredicted RBP6.93□□□□□ -1.3
PTPN3-201ENST00000262539 PCSK4Q6UW60 755 aa6.93□□□□□ -1.3
PTPN3-201ENST00000262539 OR52B4Q8NGK2 314 aa6.93□□□□□ -1.3
PTPN3-201ENST00000262539 OR1N2Q8NGR9 330 aa6.93□□□□□ -1.3
PTPN3-201ENST00000262539 JMJD8Q96S16 334 aa6.93□□□□□ -1.3
PTPN3-201ENST00000262539 LYRM2Q9NU23 88 aaPredicted RBP6.93□□□□□ -1.3
PTPN3-201ENST00000262539 C17orf100A8MU93 164 aa6.93□□□□□ -1.3
PTPN3-201ENST00000262539 P01737 135 aa6.93□□□□□ -1.3
PTPN3-201ENST00000262539 AGAP20933 346 aa6.93□□□□□ -1.3
PTPN3-201ENST00000262539 ZNF497Q6ZNH5 498 aa6.93□□□□□ -1.3
PTPN3-201ENST00000262539 OR52E5Q8NH55 327 aa6.93□□□□□ -1.3
PTPN3-201ENST00000262539 C19orf24Q9BVV8 132 aa6.93□□□□□ -1.3
PTPN3-201ENST00000262539 NPIPB6E9PJ23 425 aa6.93□□□□□ -1.3
PTPN3-201ENST00000262539 F8VVB4 439 aa6.93□□□□□ -1.3
PTPN3-201ENST00000262539 F8VWA3 439 aa6.93□□□□□ -1.3
PTPN3-201ENST00000262539 SLC25A17O43808 307 aa6.93□□□□□ -1.3
PTPN3-201ENST00000262539 CYB5R3P00387 301 aaPredicted RBP6.93□□□□□ -1.3
PTPN3-201ENST00000262539 MMP26Q9NRE1 261 aa6.93□□□□□ -1.3
PTPN3-201ENST00000262539 CCL28Q9NRJ3 127 aa6.93□□□□□ -1.3
PTPN3-201ENST00000262539 MIOXQ9UGB7 285 aa6.93□□□□□ -1.3
PTPN3-201ENST00000262539 CORTO00230 105 aa6.93□□□□□ -1.3
PTPN3-201ENST00000262539 TMEM33P57088 247 aa6.93□□□□□ -1.3
PTPN3-201ENST00000262539 RELBQ01201 579 aa6.93□□□□□ -1.3
PTPN3-201ENST00000262539 EFNB3Q15768 340 aa6.93□□□□□ -1.3
PTPN3-201ENST00000262539 RTN4RL2Q86UN3 420 aa6.93□□□□□ -1.3
PTPN3-201ENST00000262539 OR2V2Q96R30 315 aa6.93□□□□□ -1.3
PTPN3-201ENST00000262539 TECRQ9NZ01 308 aaKnown RBP6.93□□□□□ -1.3
PTPN3-201ENST00000262539 BOLA1Q9Y3E2 137 aa6.93□□□□□ -1.3
PTPN3-201ENST00000262539 FGF8P55075 233 aaPredicted RBP6.93□□□□□ -1.3
PTPN3-201ENST00000262539 TBR1Q16650 682 aa6.93□□□□□ -1.3
PTPN3-201ENST00000262539 LYRM7Q5U5X0 104 aa6.93□□□□□ -1.3
PTPN3-201ENST00000262539 TMEM252Q8N6L7 170 aa6.93□□□□□ -1.3
PTPN3-201ENST00000262539 ZNF645Q8N7E2 425 aa6.93□□□□□ -1.3
PTPN3-201ENST00000262539 OR4X2Q8NGF9 303 aa6.93□□□□□ -1.3
PTPN3-201ENST00000262539 ITLN2Q8WWU7 325 aaPredicted RBP6.93□□□□□ -1.3
PTPN3-201ENST00000262539 RSG1Q9BU20 258 aa6.93□□□□□ -1.3
PTPN3-201ENST00000262539 SIRT7Q9NRC8 400 aa6.93□□□□□ -1.3
PTPN3-201ENST00000262539 ZMAT5Q9UDW3 170 aaKnown RBP6.93□□□□□ -1.3
PTPN3-201ENST00000262539 K7N7A8 449 aa6.93□□□□□ -1.3
PTPN3-201ENST00000262539 SIGLEC5O15389 551 aa6.93□□□□□ -1.3
PTPN3-201ENST00000262539 PITX3O75364 302 aa6.93□□□□□ -1.3
PTPN3-201ENST00000262539 KLK2P20151 261 aa6.93□□□□□ -1.3
PTPN3-201ENST00000262539 PNRC1Q12796 327 aaPredicted RBP6.93□□□□□ -1.3
PTPN3-201ENST00000262539 PSG5Q15238 335 aa6.93□□□□□ -1.3
PTPN3-201ENST00000262539 C8orf31Q8N9H6 132 aa6.93□□□□□ -1.3
PTPN3-201ENST00000262539 RTBDNQ9BSG5 229 aaPredicted RBP6.93□□□□□ -1.3
PTPN3-201ENST00000262539 IGSF23A1L1A6 192 aa6.92□□□□□ -1.3
PTPN3-201ENST00000262539 ZNF737O75373 536 aa6.92□□□□□ -1.3
PTPN3-201ENST00000262539 CGAP01215 116 aa6.92□□□□□ -1.3
PTPN3-201ENST00000262539 LCN2P80188 198 aa6.92□□□□□ -1.3
PTPN3-201ENST00000262539 RIGQ13278 110 aa6.92□□□□□ -1.3
PTPN3-201ENST00000262539 RALGAPA1Q6GYQ0 2036 aa6.92□□□□□ -1.3
PTPN3-201ENST00000262539 LDLRAD3Q86YD5 345 aa6.92□□□□□ -1.3
PTPN3-201ENST00000262539 OR10G4Q8NGN3 311 aa6.92□□□□□ -1.3
PTPN3-201ENST00000262539 OR10G9Q8NGN4 311 aa6.92□□□□□ -1.3
PTPN3-201ENST00000262539 OR10G7Q8NGN6 311 aa6.92□□□□□ -1.3
PTPN3-201ENST00000262539 OR4A5Q8NH83 315 aa6.92□□□□□ -1.3
PTPN3-201ENST00000262539 OR9G1Q8NH87 305 aa6.92□□□□□ -1.3
PTPN3-201ENST00000262539 CALYQ9NYX4 217 aa6.92□□□□□ -1.3
PTPN3-201ENST00000262539 PGLYRP1O75594 196 aaPredicted RBP6.92□□□□□ -1.3
PTPN3-201ENST00000262539 IFITM2Q01629 132 aa6.92□□□□□ -1.3
PTPN3-201ENST00000262539 HGFACQ04756 655 aa6.92□□□□□ -1.3
PTPN3-201ENST00000262539 KHDC3LQ587J8 217 aa6.92□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms