RNA–Protein interactions for RNA: ENST00000262018.7

SGCA-201, Transcript of sarcoglycan alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SGCA, Length 1,432 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCA-201ENST00000262018 Q3ZCU0 254 aa10.69□□□□□ -0.7
SGCA-201ENST00000262018 PRAMEF5Q5TYX0 476 aa10.69□□□□□ -0.7
SGCA-201ENST00000262018 PDZD9Q8IXQ8 264 aa10.69□□□□□ -0.7
SGCA-201ENST00000262018 ZNF436-AS1Q8NC38 126 aaPredicted RBP10.69□□□□□ -0.7
SGCA-201ENST00000262018 OR1S1Q8NH92 325 aa10.69□□□□□ -0.7
SGCA-201ENST00000262018 H1FXQ92522 213 aaKnown RBP10.69□□□□□ -0.7
SGCA-201ENST00000262018 LSM10Q969L4 123 aaKnown RBP10.69□□□□□ -0.7
SGCA-201ENST00000262018 ZNF714Q96N38 554 aa10.69□□□□□ -0.7
SGCA-201ENST00000262018 ABHD14AQ9BUJ0 271 aa10.69□□□□□ -0.7
SGCA-201ENST00000262018 OR5AC2Q9NZP5 309 aa10.69□□□□□ -0.7
SGCA-201ENST00000262018 RYR2Q92736 4967 aa10.69□□□□□ -0.7
SGCA-201ENST00000262018 CENPVL3A0A0U1RRI6 287 aa10.68□□□□□ -0.7
SGCA-201ENST00000262018 C22orf46C9J442 243 aa10.68□□□□□ -0.7
SGCA-201ENST00000262018 SLC31A2O15432 143 aa10.68□□□□□ -0.7
SGCA-201ENST00000262018 PROP1O75360 226 aa10.68□□□□□ -0.7
SGCA-201ENST00000262018 DEDDO75618 318 aa10.68□□□□□ -0.7
SGCA-201ENST00000262018 MMP23AO75900 390 aa10.68□□□□□ -0.7
SGCA-201ENST00000262018 MBPP02686 304 aaPredicted RBP10.68□□□□□ -0.7
SGCA-201ENST00000262018 SLC25A6P12236 298 aa10.68□□□□□ -0.7
SGCA-201ENST00000262018 DLX6P56179 175 aa10.68□□□□□ -0.7
SGCA-201ENST00000262018 S100A10P60903 97 aa10.68□□□□□ -0.7
SGCA-201ENST00000262018 CT45A1Q5HYN5 189 aa10.68□□□□□ -0.7
SGCA-201ENST00000262018 UTF1Q5T230 341 aa10.68□□□□□ -0.7
SGCA-201ENST00000262018 HEPN1Q6WQI6 88 aa10.68□□□□□ -0.7
SGCA-201ENST00000262018 LYG1Q8N1E2 194 aa10.68□□□□□ -0.7
SGCA-201ENST00000262018 EIF4E3Q8N5X7 224 aaKnown RBP10.68□□□□□ -0.7
SGCA-201ENST00000262018 CT45A3Q8NHU0 189 aa10.68□□□□□ -0.7
SGCA-201ENST00000262018 C8orf46Q8TAG6 207 aa10.68□□□□□ -0.7
SGCA-201ENST00000262018 ST8SIA2Q92186 375 aa10.68□□□□□ -0.7
SGCA-201ENST00000262018 DCUN1D4Q92564 292 aa10.68□□□□□ -0.7
SGCA-201ENST00000262018 DNAH9Q9NYC9 4486 aa10.68□□□□□ -0.7
SGCA-201ENST00000262018 A0A0U1RQK1 487 aa10.67□□□□□ -0.7
SGCA-201ENST00000262018 K7EPK0 472 aa10.67□□□□□ -0.7
SGCA-201ENST00000262018 CCL3L1P16619 93 aa10.67□□□□□ -0.7
SGCA-201ENST00000262018 NFYBP25208 207 aa10.67□□□□□ -0.7
SGCA-201ENST00000262018 DUTP33316 252 aaKnown RBP10.67□□□□□ -0.7
SGCA-201ENST00000262018 LPAR6P43657 344 aa10.67□□□□□ -0.7
SGCA-201ENST00000262018 THOC7Q6I9Y2 204 aaKnown RBP10.67□□□□□ -0.7
SGCA-201ENST00000262018 SLC25A48Q6ZT89 311 aaKnown RBP10.67□□□□□ -0.7
SGCA-201ENST00000262018 FAM71E2Q8N5Q1 922 aa10.67□□□□□ -0.7
SGCA-201ENST00000262018 LY6G5BQ8NDX9 201 aa10.67□□□□□ -0.7
SGCA-201ENST00000262018 TCTEX1D2Q8WW35 142 aa10.67□□□□□ -0.7
SGCA-201ENST00000262018 LEAP2Q969E1 77 aa10.67□□□□□ -0.7
SGCA-201ENST00000262018 TENM2Q9NT68 2774 aa10.67□□□□□ -0.7
SGCA-201ENST00000262018 IGHV1-69DA0A0B4J2H0 117 aa10.67□□□□□ -0.7
SGCA-201ENST00000262018 A0A0G2JRQ6 117 aa10.67□□□□□ -0.7
SGCA-201ENST00000262018 A0A1B0GU03 582 aa10.67□□□□□ -0.7
SGCA-201ENST00000262018 LINC00473A8K010 186 aa10.67□□□□□ -0.7
SGCA-201ENST00000262018 C17orf98A8MV24 154 aa10.67□□□□□ -0.7
SGCA-201ENST00000262018 LEUTXA8MZ59 168 aa10.67□□□□□ -0.7
SGCA-201ENST00000262018 E5RGE8 158 aa10.67□□□□□ -0.7
SGCA-201ENST00000262018 PITX3O75364 302 aa10.67□□□□□ -0.7
SGCA-201ENST00000262018 TOX4O94842 621 aa10.67□□□□□ -0.7
SGCA-201ENST00000262018 IGKV1-5P01602 117 aa10.67□□□□□ -0.7
SGCA-201ENST00000262018 IGHV1-69P01742 117 aa10.67□□□□□ -0.7
SGCA-201ENST00000262018 GAPDHP04406 335 aaKnown RBP10.67□□□□□ -0.7
SGCA-201ENST00000262018 MMP9P14780 707 aa10.67□□□□□ -0.7
SGCA-201ENST00000262018 BRWD1-AS2P59051 145 aa10.67□□□□□ -0.7
SGCA-201ENST00000262018 NSUN5P1Q3KNT7 163 aa10.67□□□□□ -0.7
SGCA-201ENST00000262018 ODF3L1Q8IXM7 274 aa10.67□□□□□ -0.7
SGCA-201ENST00000262018 CD300LFQ8TDQ1 290 aa10.67□□□□□ -0.7
SGCA-201ENST00000262018 GPR146Q96CH1 333 aa10.67□□□□□ -0.7
SGCA-201ENST00000262018 RRNAD1Q96FB5 475 aaKnown RBP10.67□□□□□ -0.7
SGCA-201ENST00000262018 TBX15Q96SF7 602 aa10.67□□□□□ -0.7
SGCA-201ENST00000262018 NSG2Q9Y328 171 aa10.67□□□□□ -0.7
SGCA-201ENST00000262018 SIGLEC9Q9Y336 463 aa10.67□□□□□ -0.7
SGCA-201ENST00000262018 LSM5Q9Y4Y9 91 aaKnown RBP10.67□□□□□ -0.7
SGCA-201ENST00000262018 A0A1W2PPH5 198 aa10.66□□□□□ -0.7
SGCA-201ENST00000262018 BTBD17A6NE02 478 aa10.66□□□□□ -0.7
SGCA-201ENST00000262018 KRBOX1C9JBD0 128 aa10.66□□□□□ -0.7
SGCA-201ENST00000262018 M0R1X1 148 aa10.66□□□□□ -0.7
SGCA-201ENST00000262018 RAB29O14966 203 aa10.66□□□□□ -0.7
SGCA-201ENST00000262018 ST8SIA3O43173 380 aa10.66□□□□□ -0.7
SGCA-201ENST00000262018 SCGB1D2O95969 90 aa10.66□□□□□ -0.7
SGCA-201ENST00000262018 IGHV3-7P01780 117 aa10.66□□□□□ -0.7
SGCA-201ENST00000262018 P0C879 139 aa10.66□□□□□ -0.7
SGCA-201ENST00000262018 ID3Q02535 119 aa10.66□□□□□ -0.7
SGCA-201ENST00000262018 RPL39P5Q59GN2 51 aa10.66□□□□□ -0.7
SGCA-201ENST00000262018 HSD17B13Q7Z5P4 300 aaPredicted RBP10.66□□□□□ -0.7
SGCA-201ENST00000262018 FAM219AQ8IW50 185 aa10.66□□□□□ -0.7
SGCA-201ENST00000262018 SPAG16Q8N0X2 631 aa10.66□□□□□ -0.7
SGCA-201ENST00000262018 C8orf31Q8N9H6 132 aa10.66□□□□□ -0.7
SGCA-201ENST00000262018 ZNF596Q8TC21 504 aa10.66□□□□□ -0.7
SGCA-201ENST00000262018 CFHR4Q92496 578 aa10.66□□□□□ -0.7
SGCA-201ENST00000262018 LHX4Q969G2 390 aa10.66□□□□□ -0.7
SGCA-201ENST00000262018 ZNF251Q9BRH9 671 aa10.66□□□□□ -0.7
SGCA-201ENST00000262018 ZNF471Q9BX82 626 aaPredicted RBP10.66□□□□□ -0.7
SGCA-201ENST00000262018 C11orf1Q9H5F2 150 aa10.66□□□□□ -0.7
SGCA-201ENST00000262018 DYNC2H1Q8NCM8 4307 aaKnown RBP10.65□□□□□ -0.7
SGCA-201ENST00000262018 A0A087X0M5 115 aa10.65□□□□□ -0.7
SGCA-201ENST00000262018 A0A1B0GX30 115 aa10.65□□□□□ -0.7
SGCA-201ENST00000262018 A0A1W2PPE3 182 aa10.65□□□□□ -0.7
SGCA-201ENST00000262018 RBFOX2O43251 390 aaKnown RBP eCLIP10.65□□□□□ -0.7
SGCA-201ENST00000262018 RAMP3O60896 148 aa10.65□□□□□ -0.7
SGCA-201ENST00000262018 JTBO76095 146 aa10.65□□□□□ -0.7
SGCA-201ENST00000262018 ATG12O94817 140 aa10.65□□□□□ -0.7
SGCA-201ENST00000262018 CFDP00746 253 aaPredicted RBP10.65□□□□□ -0.7
SGCA-201ENST00000262018 NMBP08949 121 aa10.65□□□□□ -0.7
SGCA-201ENST00000262018 PVALBP20472 110 aaPredicted RBP10.65□□□□□ -0.7
SGCA-201ENST00000262018 KIR2DS2P43631 304 aa10.65□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms