RNA–Protein interactions for RNA: ENST00000261517.9

VPS13C-202, Transcript of vacuolar protein sorting 13 homolog C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS13C, Length 13,400 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13C-202ENST00000261517 DOPEY2Q9Y3R5 2298 aa3.68□□□□□ -1.82
VPS13C-202ENST00000261517 HRKO00198 91 aa3.68□□□□□ -1.82
VPS13C-202ENST00000261517 GCM2O75603 506 aaPredicted RBP3.68□□□□□ -1.82
VPS13C-202ENST00000261517 MPZL1O95297 269 aa3.68□□□□□ -1.82
VPS13C-202ENST00000261517 PIGYQ3MUY2 71 aa3.68□□□□□ -1.82
VPS13C-202ENST00000261517 TM4SF20Q53R12 229 aa3.68□□□□□ -1.82
VPS13C-202ENST00000261517 NPPCP23582 126 aa3.67□□□□□ -1.82
VPS13C-202ENST00000261517 COX7A1P24310 79 aa3.67□□□□□ -1.82
VPS13C-202ENST00000261517 ATP6V0CP27449 155 aa3.67□□□□□ -1.82
VPS13C-202ENST00000261517 PMP22Q01453 160 aa3.67□□□□□ -1.82
VPS13C-202ENST00000261517 NHLH2Q02577 135 aa3.67□□□□□ -1.82
VPS13C-202ENST00000261517 SP6Q3SY56 376 aa3.67□□□□□ -1.82
VPS13C-202ENST00000261517 ST6GALNAC3Q8NDV1 305 aa3.67□□□□□ -1.82
VPS13C-202ENST00000261517 ITLN1Q8WWA0 313 aa3.67□□□□□ -1.82
VPS13C-202ENST00000261517 ASCL2Q99929 193 aa3.67□□□□□ -1.82
VPS13C-202ENST00000261517 SSBP3Q9BWW4 388 aaPredicted RBP3.67□□□□□ -1.82
VPS13C-202ENST00000261517 MOSP00540 346 aa3.67□□□□□ -1.82
VPS13C-202ENST00000261517 GYPAP02724 150 aa3.67□□□□□ -1.82
VPS13C-202ENST00000261517 IGFL3Q6UXB1 125 aa3.67□□□□□ -1.82
VPS13C-202ENST00000261517 FGFRL1Q8N441 504 aa3.67□□□□□ -1.82
VPS13C-202ENST00000261517 ABHD17AQ96GS6 310 aa3.67□□□□□ -1.82
VPS13C-202ENST00000261517 SGK494Q96LW2 274 aa3.67□□□□□ -1.82
VPS13C-202ENST00000261517 ZNF407Q9C0G0 2248 aa3.67□□□□□ -1.82
VPS13C-202ENST00000261517 NOTCH4Q99466 2003 aa3.67□□□□□ -1.82
VPS13C-202ENST00000261517 UQCRFS1P47985 274 aa3.67□□□□□ -1.82
VPS13C-202ENST00000261517 ADAD2Q8NCV1 583 aaKnown RBP3.67□□□□□ -1.82
VPS13C-202ENST00000261517 KCNS1Q96KK3 526 aa3.67□□□□□ -1.82
VPS13C-202ENST00000261517 METTL1Q9UBP6 276 aaKnown RBP3.67□□□□□ -1.82
VPS13C-202ENST00000261517 LY96Q9Y6Y9 160 aa3.67□□□□□ -1.82
VPS13C-202ENST00000261517 A0A1B0GTI1 187 aa3.67□□□□□ -1.82
VPS13C-202ENST00000261517 SHISA8B8ZZ34 492 aa3.67□□□□□ -1.82
VPS13C-202ENST00000261517 G6PCP35575 357 aa3.67□□□□□ -1.82
VPS13C-202ENST00000261517 ATP5J2P56134 94 aa3.67□□□□□ -1.82
VPS13C-202ENST00000261517 AWAT1Q58HT5 328 aa3.67□□□□□ -1.82
VPS13C-202ENST00000261517 OR10AC1Q8NH08 325 aa3.67□□□□□ -1.82
VPS13C-202ENST00000261517 MAP1LC3AQ9H492 121 aa3.67□□□□□ -1.82
VPS13C-202ENST00000261517 TMEM242Q9NWH2 141 aa3.67□□□□□ -1.82
VPS13C-202ENST00000261517 TCF19Q9Y242 345 aa3.67□□□□□ -1.82
VPS13C-202ENST00000261517 DTX4Q9Y2E6 619 aa3.67□□□□□ -1.82
VPS13C-202ENST00000261517 RPS27P42677 84 aaKnown RBP3.67□□□□□ -1.82
VPS13C-202ENST00000261517 AESQ08117 197 aa3.67□□□□□ -1.82
VPS13C-202ENST00000261517 RRN3P1Q2M238 152 aa3.67□□□□□ -1.82
VPS13C-202ENST00000261517 FOXL2NBQ6ZUU3 175 aa3.67□□□□□ -1.82
VPS13C-202ENST00000261517 FLVCR1-AS1Q8TAF5 88 aa3.67□□□□□ -1.82
VPS13C-202ENST00000261517 RCC2Q9P258 522 aaKnown RBP3.67□□□□□ -1.82
VPS13C-202ENST00000261517 KCNE5Q9UJ90 142 aa3.67□□□□□ -1.82
VPS13C-202ENST00000261517 UFC1Q9Y3C8 167 aa3.67□□□□□ -1.82
VPS13C-202ENST00000261517 NTF3P20783 257 aa3.67□□□□□ -1.82
VPS13C-202ENST00000261517 C21orf62-AS1Q17RA5 79 aa3.67□□□□□ -1.82
VPS13C-202ENST00000261517 DTX2Q86UW9 622 aa3.67□□□□□ -1.82
VPS13C-202ENST00000261517 GVQW1Q8N7I0 195 aa3.67□□□□□ -1.82
VPS13C-202ENST00000261517 WDYHV1Q96HA8 205 aa3.67□□□□□ -1.82
VPS13C-202ENST00000261517 SPAARA0A1B0GVQ0 90 aa3.67□□□□□ -1.82
VPS13C-202ENST00000261517 M0R2Z0 102 aa3.67□□□□□ -1.82
VPS13C-202ENST00000261517 FABP4P15090 132 aa3.67□□□□□ -1.82
VPS13C-202ENST00000261517 LTBRP36941 435 aa3.67□□□□□ -1.82
VPS13C-202ENST00000261517 TFF2Q03403 129 aa3.67□□□□□ -1.82
VPS13C-202ENST00000261517 ZNF506Q5JVG8 444 aa3.67□□□□□ -1.82
VPS13C-202ENST00000261517 TOMM20LQ6UXN7 152 aa3.67□□□□□ -1.82
VPS13C-202ENST00000261517 LYPD1Q8N2G4 141 aa3.67□□□□□ -1.82
VPS13C-202ENST00000261517 OR11H7Q8NGC8 314 aa3.67□□□□□ -1.82
VPS13C-202ENST00000261517 PKIGQ9Y2B9 76 aa3.67□□□□□ -1.82
VPS13C-202ENST00000261517 LAMA3Q16787 3333 aa3.67□□□□□ -1.82
VPS13C-202ENST00000261517 LINC00587B1AMM8 73 aa3.67□□□□□ -1.82
VPS13C-202ENST00000261517 NEURL1O76050 574 aa3.67□□□□□ -1.82
VPS13C-202ENST00000261517 ZNF205O95201 554 aa3.67□□□□□ -1.82
VPS13C-202ENST00000261517 LINC00869P0C866 280 aa3.67□□□□□ -1.82
VPS13C-202ENST00000261517 LEPP41159 167 aa3.67□□□□□ -1.82
VPS13C-202ENST00000261517 ZNF497Q6ZNH5 498 aa3.67□□□□□ -1.82
VPS13C-202ENST00000261517 ABHD12Q8N2K0 398 aa3.67□□□□□ -1.82
VPS13C-202ENST00000261517 FAM168AQ92567 244 aa3.67□□□□□ -1.82
VPS13C-202ENST00000261517 PLPPR2Q96GM1 343 aa3.67□□□□□ -1.82
VPS13C-202ENST00000261517 USMG5Q96IX5 58 aa3.67□□□□□ -1.82
VPS13C-202ENST00000261517 SPANXDQ9BXN6 97 aa3.67□□□□□ -1.82
VPS13C-202ENST00000261517 CARHSP1Q9Y2V2 147 aaKnown RBP3.67□□□□□ -1.82
VPS13C-202ENST00000261517 CHD3Q12873 2000 aaKnown RBP3.67□□□□□ -1.82
VPS13C-202ENST00000261517 J3QRE1 110 aa3.67□□□□□ -1.82
VPS13C-202ENST00000261517 UBE2V2Q15819 145 aa3.67□□□□□ -1.82
VPS13C-202ENST00000261517 KIR2DL4Q99706 377 aa3.67□□□□□ -1.82
VPS13C-202ENST00000261517 C20orf24Q9BUV8 137 aa3.67□□□□□ -1.82
VPS13C-202ENST00000261517 PARD6AQ9NPB6 346 aa3.67□□□□□ -1.82
VPS13C-202ENST00000261517 NOTCH2Q04721 2471 aa3.67□□□□□ -1.82
VPS13C-202ENST00000261517 A0A1B0GVG6 124 aa3.67□□□□□ -1.82
VPS13C-202ENST00000261517 FAAP20Q6NZ36 180 aa3.67□□□□□ -1.82
VPS13C-202ENST00000261517 ATP5L2Q7Z4Y8 100 aa3.67□□□□□ -1.82
VPS13C-202ENST00000261517 ZNF418Q8TF45 676 aaPredicted RBP3.67□□□□□ -1.82
VPS13C-202ENST00000261517 DDB2Q92466 427 aa3.67□□□□□ -1.82
VPS13C-202ENST00000261517 SLC25A38Q96DW6 304 aa3.67□□□□□ -1.82
VPS13C-202ENST00000261517 SRXN1Q9BYN0 137 aa3.67□□□□□ -1.82
VPS13C-202ENST00000261517 C17orf100A8MU93 164 aa3.66□□□□□ -1.82
VPS13C-202ENST00000261517 AMBPP02760 352 aa3.66□□□□□ -1.82
VPS13C-202ENST00000261517 FAM157CP0CG43 387 aa3.66□□□□□ -1.82
VPS13C-202ENST00000261517 SPNP16150 400 aa3.66□□□□□ -1.82
VPS13C-202ENST00000261517 SLC25A16P16260 332 aa3.66□□□□□ -1.82
VPS13C-202ENST00000261517 LOXL3P58215 753 aa3.66□□□□□ -1.82
VPS13C-202ENST00000261517 SRSF2Q01130 221 aaKnown RBP3.66□□□□□ -1.82
VPS13C-202ENST00000261517 TMEM155Q4W5P6 130 aa3.66□□□□□ -1.82
VPS13C-202ENST00000261517 PRR27Q6MZM9 219 aa3.66□□□□□ -1.82
VPS13C-202ENST00000261517 LYZL2Q7Z4W2 148 aa3.66□□□□□ -1.82
VPS13C-202ENST00000261517 OR10AG1Q8NH19 301 aa3.66□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms