RNA–Protein interactions for RNA: ENST00000261368.12

SNCAIP-202, Transcript of synuclein alpha interacting protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNCAIP, Length 3,745 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCAIP-202ENST00000261368 GABRA6Q16445 453 aa13.49□□□□□ -0.25
SNCAIP-202ENST00000261368 HES3Q5TGS1 186 aa13.49□□□□□ -0.25
SNCAIP-202ENST00000261368 CYB5R2Q6BCY4 276 aa13.49□□□□□ -0.25
SNCAIP-202ENST00000261368 GMPPAQ96IJ6 420 aaPredicted RBP13.49□□□□□ -0.25
SNCAIP-202ENST00000261368 TMEM210A6NLX4 147 aa13.48□□□□□ -0.25
SNCAIP-202ENST00000261368 C15orf62A8K5M9 175 aa13.48□□□□□ -0.25
SNCAIP-202ENST00000261368 WDR82Q6UXN9 313 aa13.48□□□□□ -0.25
SNCAIP-202ENST00000261368 AGMATQ9BSE5 352 aa13.48□□□□□ -0.25
SNCAIP-202ENST00000261368 PAM16Q9Y3D7 125 aa13.48□□□□□ -0.25
SNCAIP-202ENST00000261368 YLPM1P49750 1951 aaKnown RBP13.48□□□□□ -0.25
SNCAIP-202ENST00000261368 C21orf140B9A014 251 aa13.48□□□□□ -0.25
SNCAIP-202ENST00000261368 FAM122AQ96E09 287 aa13.48□□□□□ -0.25
SNCAIP-202ENST00000261368 FAM214BQ7L5A3 538 aa13.48□□□□□ -0.25
SNCAIP-202ENST00000261368 SS18L1O75177 396 aaPredicted RBP13.47□□□□□ -0.25
SNCAIP-202ENST00000261368 TAS2R60P59551 318 aa13.47□□□□□ -0.25
SNCAIP-202ENST00000261368 KRTDAPP60985 99 aa13.47□□□□□ -0.25
SNCAIP-202ENST00000261368 MOGAT3Q86VF5 341 aa13.47□□□□□ -0.25
SNCAIP-202ENST00000261368 NOL4LQ96MY1 436 aaPredicted RBP13.47□□□□□ -0.25
SNCAIP-202ENST00000261368 PARD6AQ9NPB6 346 aa13.47□□□□□ -0.25
SNCAIP-202ENST00000261368 TMEM140Q9NV12 185 aa13.47□□□□□ -0.25
SNCAIP-202ENST00000261368 MUC3AQ02505 3323 aa13.47□□□□□ -0.25
SNCAIP-202ENST00000261368 IQCF6A8MYZ5 107 aa13.47□□□□□ -0.25
SNCAIP-202ENST00000261368 MT-CO2P00403 227 aa13.47□□□□□ -0.25
SNCAIP-202ENST00000261368 CRISP2P16562 243 aa13.47□□□□□ -0.25
SNCAIP-202ENST00000261368 CCKARP32238 428 aa13.47□□□□□ -0.25
SNCAIP-202ENST00000261368 RPL31P62899 125 aaKnown RBP13.47□□□□□ -0.25
SNCAIP-202ENST00000261368 OR5I1Q13606 314 aa13.47□□□□□ -0.25
SNCAIP-202ENST00000261368 KIAA1644Q3SXP7 199 aa13.47□□□□□ -0.25
SNCAIP-202ENST00000261368 SPATA31B1PQ5VZV4 182 aa13.47□□□□□ -0.25
SNCAIP-202ENST00000261368 SP5Q6BEB4 398 aaPredicted RBP13.47□□□□□ -0.25
SNCAIP-202ENST00000261368 FAM216AQ8WUB2 273 aa13.47□□□□□ -0.25
SNCAIP-202ENST00000261368 SPTA1P02549 2419 aa13.47□□□□□ -0.25
SNCAIP-202ENST00000261368 VENTXO95231 258 aa13.47□□□□□ -0.25
SNCAIP-202ENST00000261368 OCC1Q8TAD7 63 aa13.47□□□□□ -0.25
SNCAIP-202ENST00000261368 NDUFAF3Q9BU61 184 aa13.47□□□□□ -0.25
SNCAIP-202ENST00000261368 NAGKQ9UJ70 344 aa13.47□□□□□ -0.25
SNCAIP-202ENST00000261368 WDR83OSQ9Y284 106 aa13.47□□□□□ -0.25
SNCAIP-202ENST00000261368 A8MWP6 167 aa13.46□□□□□ -0.25
SNCAIP-202ENST00000261368 M0R1B8 84 aa13.46□□□□□ -0.25
SNCAIP-202ENST00000261368 EREGO14944 169 aa13.46□□□□□ -0.25
SNCAIP-202ENST00000261368 CECR9P0C854 216 aa13.46□□□□□ -0.25
SNCAIP-202ENST00000261368 SELLP14151 372 aa13.46□□□□□ -0.25
SNCAIP-202ENST00000261368 MYOD1P15172 320 aa13.46□□□□□ -0.25
SNCAIP-202ENST00000261368 PSG5Q15238 335 aa13.46□□□□□ -0.25
SNCAIP-202ENST00000261368 ACTL10Q5JWF8 245 aa13.46□□□□□ -0.25
SNCAIP-202ENST00000261368 INO80CQ6PI98 192 aaPredicted RBP13.46□□□□□ -0.25
SNCAIP-202ENST00000261368 VN1R17PQ8TDU5 208 aa13.46□□□□□ -0.25
SNCAIP-202ENST00000261368 RBFOX2O43251 390 aaKnown RBP eCLIP13.46□□□□□ -0.25
SNCAIP-202ENST00000261368 HPRT1P00492 218 aa13.46□□□□□ -0.25
SNCAIP-202ENST00000261368 ADMP35318 185 aa13.46□□□□□ -0.25
SNCAIP-202ENST00000261368 SPCS3P61009 180 aa13.46□□□□□ -0.25
SNCAIP-202ENST00000261368 SNURFLB1AK76 121 aa13.46□□□□□ -0.26
SNCAIP-202ENST00000261368 CXorf1O96002 111 aa13.46□□□□□ -0.26
SNCAIP-202ENST00000261368 OR10J4P0C629 311 aa13.46□□□□□ -0.26
SNCAIP-202ENST00000261368 TREML4Q6UXN2 200 aa13.46□□□□□ -0.26
SNCAIP-202ENST00000261368 HSPB9Q9BQS6 159 aa13.46□□□□□ -0.26
SNCAIP-202ENST00000261368 KCNIP2Q9NS61 270 aa13.46□□□□□ -0.26
SNCAIP-202ENST00000261368 TCF19Q9Y242 345 aa13.46□□□□□ -0.26
SNCAIP-202ENST00000261368 WISP2O76076 250 aa13.45□□□□□ -0.26
SNCAIP-202ENST00000261368 GATA2P23769 480 aaPredicted RBP13.45□□□□□ -0.26
SNCAIP-202ENST00000261368 BRWD1-AS2P59051 145 aa13.45□□□□□ -0.26
SNCAIP-202ENST00000261368 FXYD3Q14802 87 aa13.45□□□□□ -0.26
SNCAIP-202ENST00000261368 OR1L6Q8NGR2 347 aa13.45□□□□□ -0.26
SNCAIP-202ENST00000261368 OPN3Q9H1Y3 402 aaPredicted RBP13.45□□□□□ -0.26
SNCAIP-202ENST00000261368 NAT8BQ9UHF3 227 aa13.45□□□□□ -0.26
SNCAIP-202ENST00000261368 NKX2-8O15522 239 aa13.45□□□□□ -0.26
SNCAIP-202ENST00000261368 GGCTO75223 188 aaKnown RBP13.45□□□□□ -0.26
SNCAIP-202ENST00000261368 NPY1RP25929 384 aa13.45□□□□□ -0.26
SNCAIP-202ENST00000261368 GP6Q9HCN6 339 aa13.45□□□□□ -0.26
SNCAIP-202ENST00000261368 A0A1W2PNU3 283 aaPredicted RBP13.44□□□□□ -0.26
SNCAIP-202ENST00000261368 ADH4P08319 380 aa13.44□□□□□ -0.26
SNCAIP-202ENST00000261368 PMCHP20382 165 aa13.44□□□□□ -0.26
SNCAIP-202ENST00000261368 DUTP33316 252 aaKnown RBP13.44□□□□□ -0.26
SNCAIP-202ENST00000261368 ACSF3Q4G176 576 aaPredicted RBP13.44□□□□□ -0.26
SNCAIP-202ENST00000261368 CD177Q8N6Q3 437 aa13.44□□□□□ -0.26
SNCAIP-202ENST00000261368 NTF3P20783 257 aa13.44□□□□□ -0.26
SNCAIP-202ENST00000261368 RHOBP62745 196 aa13.44□□□□□ -0.26
SNCAIP-202ENST00000261368 TEX38Q6PEX7 206 aa13.44□□□□□ -0.26
SNCAIP-202ENST00000261368 OR8I2Q8N0Y5 310 aa13.44□□□□□ -0.26
SNCAIP-202ENST00000261368 SEPSECSQ9HD40 501 aaKnown RBP13.44□□□□□ -0.26
SNCAIP-202ENST00000261368 ZNF318Q5VUA4 2279 aa13.44□□□□□ -0.26
SNCAIP-202ENST00000261368 CASP6P55212 293 aa13.44□□□□□ -0.26
SNCAIP-202ENST00000261368 HCFC1P51610 2035 aa13.44□□□□□ -0.26
SNCAIP-202ENST00000261368 NUPR1O60356 82 aa13.43□□□□□ -0.26
SNCAIP-202ENST00000261368 FOXH1O75593 365 aa13.43□□□□□ -0.26
SNCAIP-202ENST00000261368 CGAP01215 116 aa13.43□□□□□ -0.26
SNCAIP-202ENST00000261368 TPPP2P59282 170 aa13.43□□□□□ -0.26
SNCAIP-202ENST00000261368 MRPL54Q6P161 138 aaKnown RBP13.43□□□□□ -0.26
SNCAIP-202ENST00000261368 TEPPQ6URK8 271 aa13.43□□□□□ -0.26
SNCAIP-202ENST00000261368 DBX2Q6ZNG2 339 aa13.43□□□□□ -0.26
SNCAIP-202ENST00000261368 GBGT1Q8N5D6 347 aa13.43□□□□□ -0.26
SNCAIP-202ENST00000261368 STPG3Q8N7X2 389 aa13.43□□□□□ -0.26
SNCAIP-202ENST00000261368 RND1Q92730 232 aa13.43□□□□□ -0.26
SNCAIP-202ENST00000261368 BTF3L4Q96K17 158 aa13.43□□□□□ -0.26
SNCAIP-202ENST00000261368 MGST2Q99735 147 aa13.43□□□□□ -0.26
SNCAIP-202ENST00000261368 MRPL18Q9H0U6 180 aaKnown RBP13.43□□□□□ -0.26
SNCAIP-202ENST00000261368 NPVFQ9HCQ7 196 aa13.43□□□□□ -0.26
SNCAIP-202ENST00000261368 TECTAO75443 2155 aa13.43□□□□□ -0.26
SNCAIP-202ENST00000261368 PMS2P5A8MQ11 134 aa13.43□□□□□ -0.26
SNCAIP-202ENST00000261368 IL6RP08887 468 aaPredicted RBP13.43□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 61.9 ms