RNA–Protein interactions for RNA: ENST00000261024.6

SLC40A1-201, Transcript of solute carrier family 40 member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC40A1, Length 3,442 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC40A1-201ENST00000261024 HLA-DQA1P01909 254 aa12.48□□□□□ -0.41
SLC40A1-201ENST00000261024 AMY1AP04745 511 aa12.48□□□□□ -0.41
SLC40A1-201ENST00000261024 STAG3L2P0CL84 134 aa12.48□□□□□ -0.41
SLC40A1-201ENST00000261024 STAG3L3P0CL85 134 aa12.48□□□□□ -0.41
SLC40A1-201ENST00000261024 CEACAM16Q2WEN9 425 aa12.48□□□□□ -0.41
SLC40A1-201ENST00000261024 OR2H1Q9GZK4 316 aa12.48□□□□□ -0.41
SLC40A1-201ENST00000261024 GCM1Q9NP62 436 aa12.48□□□□□ -0.41
SLC40A1-201ENST00000261024 ZNF331Q9NQX6 463 aaPredicted RBP12.48□□□□□ -0.41
SLC40A1-201ENST00000261024 CELSR3Q9NYQ7 3312 aa12.48□□□□□ -0.41
SLC40A1-201ENST00000261024 RHOBP62745 196 aa12.48□□□□□ -0.41
SLC40A1-201ENST00000261024 GABRA6Q16445 453 aa12.48□□□□□ -0.41
SLC40A1-201ENST00000261024 H2BFWTQ7Z2G1 175 aa12.48□□□□□ -0.41
SLC40A1-201ENST00000261024 C7orf61Q8IZ16 206 aa12.48□□□□□ -0.41
SLC40A1-201ENST00000261024 OR2T6Q8NHC8 308 aa12.48□□□□□ -0.41
SLC40A1-201ENST00000261024 RAB1CQ92928 201 aa12.48□□□□□ -0.41
SLC40A1-201ENST00000261024 EXPH5Q8NEV8 1989 aa12.48□□□□□ -0.41
SLC40A1-201ENST00000261024 IGHV3-64DA0A0J9YX35 117 aa12.47□□□□□ -0.41
SLC40A1-201ENST00000261024 FOXH1O75593 365 aa12.47□□□□□ -0.41
SLC40A1-201ENST00000261024 LINC00869P0C866 280 aa12.47□□□□□ -0.41
SLC40A1-201ENST00000261024 CRYBB3P26998 211 aa12.47□□□□□ -0.41
SLC40A1-201ENST00000261024 GPR6P46095 362 aaPredicted RBP12.47□□□□□ -0.41
SLC40A1-201ENST00000261024 SPATA31B1PQ5VZV4 182 aa12.47□□□□□ -0.41
SLC40A1-201ENST00000261024 FAM53AQ6NSI3 398 aaPredicted RBP12.47□□□□□ -0.41
SLC40A1-201ENST00000261024 SPATA12Q7Z6I5 190 aa12.47□□□□□ -0.41
SLC40A1-201ENST00000261024 Q8N7P7 452 aa12.47□□□□□ -0.41
SLC40A1-201ENST00000261024 FOXB1Q99853 325 aa12.47□□□□□ -0.41
SLC40A1-201ENST00000261024 SSBP3Q9BWW4 388 aaPredicted RBP12.47□□□□□ -0.41
SLC40A1-201ENST00000261024 FGF21Q9NSA1 209 aa12.47□□□□□ -0.41
SLC40A1-201ENST00000261024 ZNF391Q9UJN7 358 aa12.47□□□□□ -0.41
SLC40A1-201ENST00000261024 TIMM8BQ9Y5J9 83 aaPredicted RBP12.47□□□□□ -0.41
SLC40A1-201ENST00000261024 FAM186AA6NE01 2351 aa12.47□□□□□ -0.41
SLC40A1-201ENST00000261024 HELTA6NFD8 242 aa12.47□□□□□ -0.41
SLC40A1-201ENST00000261024 NTF4P34130 210 aa12.47□□□□□ -0.41
SLC40A1-201ENST00000261024 CLDN18P56856 261 aa12.47□□□□□ -0.41
SLC40A1-201ENST00000261024 LINC00205P59089 165 aa12.47□□□□□ -0.41
SLC40A1-201ENST00000261024 LHFPL4Q7Z7J7 247 aa12.47□□□□□ -0.41
SLC40A1-201ENST00000261024 DEFB125Q8N687 156 aa12.47□□□□□ -0.41
SLC40A1-201ENST00000261024 NHLRC2Q8NBF2 726 aa12.47□□□□□ -0.41
SLC40A1-201ENST00000261024 CHODLQ9H9P2 273 aa12.47□□□□□ -0.41
SLC40A1-201ENST00000261024 DLL3Q9NYJ7 618 aa12.47□□□□□ -0.41
SLC40A1-201ENST00000261024 WDR83OSQ9Y284 106 aa12.47□□□□□ -0.41
SLC40A1-201ENST00000261024 LTBP2Q14767 1821 aa12.47□□□□□ -0.41
SLC40A1-201ENST00000261024 ACTL6BO94805 426 aa12.47□□□□□ -0.41
SLC40A1-201ENST00000261024 VAMP5O95183 116 aa12.47□□□□□ -0.41
SLC40A1-201ENST00000261024 MYF5P13349 255 aa12.47□□□□□ -0.41
SLC40A1-201ENST00000261024 GCHFRP30047 84 aa12.47□□□□□ -0.41
SLC40A1-201ENST00000261024 RPL30P62888 115 aaKnown RBP12.47□□□□□ -0.41
SLC40A1-201ENST00000261024 RPL8P62917 257 aaKnown RBP12.47□□□□□ -0.41
SLC40A1-201ENST00000261024 WDR74Q6RFH5 385 aaPredicted RBP12.47□□□□□ -0.41
SLC40A1-201ENST00000261024 MRPL21Q7Z2W9 205 aaKnown RBP12.47□□□□□ -0.41
SLC40A1-201ENST00000261024 TXNDC17Q9BRA2 123 aa12.47□□□□□ -0.41
SLC40A1-201ENST00000261024 R4GN57 208 aa12.47□□□□□ -0.41
SLC40A1-201ENST00000261024 KNTC1P50748 2209 aa12.47□□□□□ -0.41
SLC40A1-201ENST00000261024 A0A087X0K7 114 aa12.46□□□□□ -0.41
SLC40A1-201ENST00000261024 REG1AP05451 166 aa12.46□□□□□ -0.41
SLC40A1-201ENST00000261024 SMIM21Q3B7S5 101 aa12.46□□□□□ -0.41
SLC40A1-201ENST00000261024 SLC23A3Q6PIS1 610 aa12.46□□□□□ -0.41
SLC40A1-201ENST00000261024 NFAM1Q8NET5 270 aaPredicted RBP12.46□□□□□ -0.41
SLC40A1-201ENST00000261024 PTPRSQ13332 1948 aa12.46□□□□□ -0.41
SLC40A1-201ENST00000261024 VPS13AQ96RL7 3174 aa12.46□□□□□ -0.41
SLC40A1-201ENST00000261024 GAGE10A6NGK3 116 aa12.46□□□□□ -0.41
SLC40A1-201ENST00000261024 SH2D7A6NKC9 451 aaPredicted RBP12.46□□□□□ -0.41
SLC40A1-201ENST00000261024 OR7C2O60412 319 aa12.46□□□□□ -0.41
SLC40A1-201ENST00000261024 CGAP01215 116 aa12.46□□□□□ -0.41
SLC40A1-201ENST00000261024 GABRG2P18507 467 aa12.46□□□□□ -0.41
SLC40A1-201ENST00000261024 MCRIP2Q9BUT9 160 aaKnown RBP12.46□□□□□ -0.41
SLC40A1-201ENST00000261024 LILRA5A6NI73 299 aa12.46□□□□□ -0.42
SLC40A1-201ENST00000261024 TIGITQ495A1 244 aa12.46□□□□□ -0.42
SLC40A1-201ENST00000261024 SLC25A34Q6PIV7 304 aa12.46□□□□□ -0.42
SLC40A1-201ENST00000261024 CLUHP3Q96NS8 147 aa12.46□□□□□ -0.42
SLC40A1-201ENST00000261024 SSBP4Q9BWG4 385 aaPredicted RBP12.46□□□□□ -0.42
SLC40A1-201ENST00000261024 TECRQ9NZ01 308 aaKnown RBP12.46□□□□□ -0.42
SLC40A1-201ENST00000261024 RP1L1Q8IWN7 2480 aaPredicted RBP12.45□□□□□ -0.42
SLC40A1-201ENST00000261024 COL5A1P20908 1838 aaPredicted RBP12.45□□□□□ -0.42
SLC40A1-201ENST00000261024 SNAI2O43623 268 aa12.45□□□□□ -0.42
SLC40A1-201ENST00000261024 NBEAP1P0C6P0 100 aa12.45□□□□□ -0.42
SLC40A1-201ENST00000261024 MRPL49Q13405 166 aaKnown RBP12.45□□□□□ -0.42
SLC40A1-201ENST00000261024 ZNF718Q3SXZ3 478 aa12.45□□□□□ -0.42
SLC40A1-201ENST00000261024 IBA57Q5T440 356 aaKnown RBP12.45□□□□□ -0.42
SLC40A1-201ENST00000261024 FAM71F2Q6NXP2 309 aa12.45□□□□□ -0.42
SLC40A1-201ENST00000261024 C16orf54Q6UWD8 224 aa12.45□□□□□ -0.42
SLC40A1-201ENST00000261024 SCCPDHQ8NBX0 429 aa12.45□□□□□ -0.42
SLC40A1-201ENST00000261024 SVIPQ8NHG7 77 aa12.45□□□□□ -0.42
SLC40A1-201ENST00000261024 SRXN1Q9BYN0 137 aa12.45□□□□□ -0.42
SLC40A1-201ENST00000261024 C17orf98A8MV24 154 aa12.45□□□□□ -0.42
SLC40A1-201ENST00000261024 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP12.45□□□□□ -0.42
SLC40A1-201ENST00000261024 ZFAND5O76080 213 aa12.45□□□□□ -0.42
SLC40A1-201ENST00000261024 RPS20P60866 119 aaKnown RBP12.45□□□□□ -0.42
SLC40A1-201ENST00000261024 C12orf54Q6X4T0 127 aa12.45□□□□□ -0.42
SLC40A1-201ENST00000261024 AAED1Q7RTV5 226 aa12.45□□□□□ -0.42
SLC40A1-201ENST00000261024 NINJ1Q92982 152 aa12.45□□□□□ -0.42
SLC40A1-201ENST00000261024 SPACA9Q96E40 222 aaPredicted RBP12.45□□□□□ -0.42
SLC40A1-201ENST00000261024 CHRDL1Q9BU40 450 aa12.45□□□□□ -0.42
SLC40A1-201ENST00000261024 TMEM70Q9BUB7 260 aa12.45□□□□□ -0.42
SLC40A1-201ENST00000261024 DEFB126Q9BYW3 111 aa12.45□□□□□ -0.42
SLC40A1-201ENST00000261024 FNDC4Q9H6D8 234 aaPredicted RBP12.45□□□□□ -0.42
SLC40A1-201ENST00000261024 A0A0J9YW62 118 aa12.44□□□□□ -0.42
SLC40A1-201ENST00000261024 C15orf62A8K5M9 175 aa12.44□□□□□ -0.42
SLC40A1-201ENST00000261024 GNG7O60262 68 aa12.44□□□□□ -0.42
SLC40A1-201ENST00000261024 OR8B3Q8NGG8 313 aa12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms