RNA–Protein interactions for RNA: ENST00000258607.9

CKAP2-201, Transcript of cytoskeleton associated protein 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CKAP2, Length 3,375 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP2-201ENST00000258607 TMEM56Q96MV1 263 aa7.5□□□□□ -1.21
CKAP2-201ENST00000258607 HSD17B10Q99714 261 aaKnown RBP7.5□□□□□ -1.21
CKAP2-201ENST00000258607 SFXN3Q9BWM7 321 aa7.5□□□□□ -1.21
CKAP2-201ENST00000258607 EGLN1Q9GZT9 426 aa7.5□□□□□ -1.21
CKAP2-201ENST00000258607 NDRG3Q9UGV2 375 aa7.5□□□□□ -1.21
CKAP2-201ENST00000258607 TMEM56-RWDD3S4R434 201 aa7.5□□□□□ -1.21
CKAP2-201ENST00000258607 KMT2EQ8IZD2 1858 aa7.49□□□□□ -1.21
CKAP2-201ENST00000258607 IGHV3OR16-13A0A075B7E8 117 aa7.49□□□□□ -1.21
CKAP2-201ENST00000258607 IGHV3-74A0A0B4J1X5 117 aa7.49□□□□□ -1.21
CKAP2-201ENST00000258607 K7ENP7 123 aa7.49□□□□□ -1.21
CKAP2-201ENST00000258607 K7N7A8 449 aa7.49□□□□□ -1.21
CKAP2-201ENST00000258607 OR7C2O60412 319 aa7.49□□□□□ -1.21
CKAP2-201ENST00000258607 DANCRP0C864 163 aa7.49□□□□□ -1.21
CKAP2-201ENST00000258607 TMEM11P17152 192 aa7.49□□□□□ -1.21
CKAP2-201ENST00000258607 TNFRSF1AP19438 455 aa7.49□□□□□ -1.21
CKAP2-201ENST00000258607 KLF17Q5JT82 389 aaPredicted RBP7.49□□□□□ -1.21
CKAP2-201ENST00000258607 SPATA31B1PQ5VZV4 182 aa7.49□□□□□ -1.21
CKAP2-201ENST00000258607 LEMD1Q68G75 181 aa7.49□□□□□ -1.21
CKAP2-201ENST00000258607 MRGPRGQ86SM5 289 aa7.49□□□□□ -1.21
CKAP2-201ENST00000258607 ZNF429Q86V71 674 aa7.49□□□□□ -1.21
CKAP2-201ENST00000258607 Q8TCH9 128 aa7.49□□□□□ -1.21
CKAP2-201ENST00000258607 RCC1LQ96I51 464 aaKnown RBP7.49□□□□□ -1.21
CKAP2-201ENST00000258607 SSX3Q99909 188 aa7.49□□□□□ -1.21
CKAP2-201ENST00000258607 DERL1Q9BUN8 251 aa7.49□□□□□ -1.21
CKAP2-201ENST00000258607 TMEM106BQ9NUM4 274 aa7.49□□□□□ -1.21
CKAP2-201ENST00000258607 TRIM77I1YAP6 450 aa7.49□□□□□ -1.21
CKAP2-201ENST00000258607 OR5G3P0C626 314 aa7.49□□□□□ -1.21
CKAP2-201ENST00000258607 DUTP33316 252 aaKnown RBP7.49□□□□□ -1.21
CKAP2-201ENST00000258607 MDH2P40926 338 aaKnown RBP7.49□□□□□ -1.21
CKAP2-201ENST00000258607 DVL1P1P54792 670 aaPredicted RBP7.49□□□□□ -1.21
CKAP2-201ENST00000258607 UCP3P55916 312 aa7.49□□□□□ -1.21
CKAP2-201ENST00000258607 SSX2Q16385 188 aa7.49□□□□□ -1.21
CKAP2-201ENST00000258607 KRTCAP3Q53RY4 240 aa7.49□□□□□ -1.21
CKAP2-201ENST00000258607 EDARADDQ8WWZ3 215 aa7.49□□□□□ -1.21
CKAP2-201ENST00000258607 PHYHIPLQ96FC7 376 aa7.49□□□□□ -1.21
CKAP2-201ENST00000258607 LINC00527Q9UJ94 153 aa7.49□□□□□ -1.21
CKAP2-201ENST00000258607 FLNAP21333 2647 aaKnown RBP7.48□□□□□ -1.21
CKAP2-201ENST00000258607 NACAE9PAV3 2078 aa7.48□□□□□ -1.21
CKAP2-201ENST00000258607 NKX6-3A6NJ46 265 aa7.48□□□□□ -1.21
CKAP2-201ENST00000258607 SRRM4A7MD48 611 aaKnown RBP7.48□□□□□ -1.21
CKAP2-201ENST00000258607 H3BQ15 152 aa7.48□□□□□ -1.21
CKAP2-201ENST00000258607 CA11O75493 328 aa7.48□□□□□ -1.21
CKAP2-201ENST00000258607 OR2C1O95371 312 aa7.48□□□□□ -1.21
CKAP2-201ENST00000258607 IGLV1-44P01699 117 aa7.48□□□□□ -1.21
CKAP2-201ENST00000258607 GZMHP20718 246 aa7.48□□□□□ -1.21
CKAP2-201ENST00000258607 HMGN3Q15651 99 aa7.48□□□□□ -1.21
CKAP2-201ENST00000258607 ZNF295-AS1Q8N0V1 137 aa7.48□□□□□ -1.21
CKAP2-201ENST00000258607 OR13D1Q8NGV5 346 aa7.48□□□□□ -1.21
CKAP2-201ENST00000258607 RNASE6Q93091 150 aaKnown RBP7.48□□□□□ -1.21
CKAP2-201ENST00000258607 HIPK2Q9H2X6 1198 aa7.48□□□□□ -1.21
CKAP2-201ENST00000258607 UNKLQ9H9P5 680 aaKnown RBP7.48□□□□□ -1.21
CKAP2-201ENST00000258607 GCN1Q92616 2671 aaKnown RBP7.48□□□□□ -1.21
CKAP2-201ENST00000258607 RNF212BA8MTL3 300 aa7.48□□□□□ -1.21
CKAP2-201ENST00000258607 MOSP00540 346 aa7.48□□□□□ -1.21
CKAP2-201ENST00000258607 RPS23P62266 143 aaKnown RBP7.48□□□□□ -1.21
CKAP2-201ENST00000258607 SLC35E4Q6ICL7 350 aa7.48□□□□□ -1.21
CKAP2-201ENST00000258607 OR4A47Q6IF82 309 aa7.48□□□□□ -1.21
CKAP2-201ENST00000258607 RPP25LQ8N5L8 163 aaKnown RBP7.48□□□□□ -1.21
CKAP2-201ENST00000258607 ZNF383Q8NA42 475 aa7.48□□□□□ -1.21
CKAP2-201ENST00000258607 SNX22Q96L94 193 aa7.48□□□□□ -1.21
CKAP2-201ENST00000258607 SMIM7Q9BQ49 75 aa7.48□□□□□ -1.21
CKAP2-201ENST00000258607 COMMD5Q9GZQ3 224 aa7.48□□□□□ -1.21
CKAP2-201ENST00000258607 PLSCR2Q9NRY7 297 aa7.48□□□□□ -1.21
CKAP2-201ENST00000258607 CTSZQ9UBR2 303 aa7.48□□□□□ -1.21
CKAP2-201ENST00000258607 GAB2Q9UQC2 676 aa7.48□□□□□ -1.21
CKAP2-201ENST00000258607 IGHV1-69-2A0A0G2JMI3 117 aa7.48□□□□□ -1.21
CKAP2-201ENST00000258607 A0A1B0GU03 582 aa7.48□□□□□ -1.21
CKAP2-201ENST00000258607 A0A1W2PPQ1 181 aa7.48□□□□□ -1.21
CKAP2-201ENST00000258607 NCBP2LA6PVI3 153 aaKnown RBP7.48□□□□□ -1.21
CKAP2-201ENST00000258607 VSTM5A8MXK1 200 aa7.48□□□□□ -1.21
CKAP2-201ENST00000258607 J3QR06 171 aa7.48□□□□□ -1.21
CKAP2-201ENST00000258607 CYB5BO43169 146 aa7.48□□□□□ -1.21
CKAP2-201ENST00000258607 CNIH1O95406 144 aa7.48□□□□□ -1.21
CKAP2-201ENST00000258607 KITLGP21583 273 aa7.48□□□□□ -1.21
CKAP2-201ENST00000258607 GNLYP22749 145 aa7.48□□□□□ -1.21
CKAP2-201ENST00000258607 OPRK1P41145 380 aa7.48□□□□□ -1.21
CKAP2-201ENST00000258607 TMPRSS3P57727 454 aa7.48□□□□□ -1.21
CKAP2-201ENST00000258607 LCN2P80188 198 aa7.48□□□□□ -1.21
CKAP2-201ENST00000258607 DLK1P80370 383 aa7.48□□□□□ -1.21
CKAP2-201ENST00000258607 TNXAQ16473 311 aa7.48□□□□□ -1.21
CKAP2-201ENST00000258607 PRR27Q6MZM9 219 aa7.48□□□□□ -1.21
CKAP2-201ENST00000258607 MOB1BQ7L9L4 216 aa7.48□□□□□ -1.21
CKAP2-201ENST00000258607 ZNF525Q8N782 197 aa7.48□□□□□ -1.21
CKAP2-201ENST00000258607 OR2T6Q8NHC8 308 aa7.48□□□□□ -1.21
CKAP2-201ENST00000258607 BLNKQ8WV28 456 aa7.48□□□□□ -1.21
CKAP2-201ENST00000258607 ZCCHC14Q8WYQ9 949 aaKnown RBP7.48□□□□□ -1.21
CKAP2-201ENST00000258607 FRZBQ92765 325 aa7.48□□□□□ -1.21
CKAP2-201ENST00000258607 TAF15Q92804 592 aaKnown RBP eCLIP7.48□□□□□ -1.21
CKAP2-201ENST00000258607 RAB39BQ96DA2 213 aa7.48□□□□□ -1.21
CKAP2-201ENST00000258607 GAFA1Q96PS6 74 aa7.48□□□□□ -1.21
CKAP2-201ENST00000258607 ARV1Q9H2C2 271 aa7.48□□□□□ -1.21
CKAP2-201ENST00000258607 TGIF2-C20orf24A0A0A6YYL0 155 aa7.47□□□□□ -1.21
CKAP2-201ENST00000258607 FAM90A10PA6NDY2 464 aa7.47□□□□□ -1.21
CKAP2-201ENST00000258607 FAM90A18PA6NE21 464 aa7.47□□□□□ -1.21
CKAP2-201ENST00000258607 FAM90A16PA6NEW6 464 aa7.47□□□□□ -1.21
CKAP2-201ENST00000258607 FAM90A20PA6NIJ5 464 aa7.47□□□□□ -1.21
CKAP2-201ENST00000258607 FAM90A8PA6NJQ4 464 aa7.47□□□□□ -1.21
CKAP2-201ENST00000258607 FAM90A7PA6NKC0 464 aa7.47□□□□□ -1.21
CKAP2-201ENST00000258607 FAM90A22PA8MWA6 464 aa7.47□□□□□ -1.21
CKAP2-201ENST00000258607 FAM90A12PA8MX19 464 aa7.47□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms