RNA–Protein interactions for RNA: ENST00000254231.4

LIN28A-201, Transcript of lin-28 homolog A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIN28A, Length 3,458 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN28A-201ENST00000254231 HEXA-AS1Q9H8Q6 139 aa9.51□□□□□ -0.89
LIN28A-201ENST00000254231 ZNF107Q9UII5 783 aaPredicted RBP9.51□□□□□ -0.89
LIN28A-201ENST00000254231 TMED3Q9Y3Q3 217 aa9.51□□□□□ -0.89
LIN28A-201ENST00000254231 J3QKU1 62 aa9.51□□□□□ -0.89
LIN28A-201ENST00000254231 ATG12O94817 140 aa9.51□□□□□ -0.89
LIN28A-201ENST00000254231 NMBP08949 121 aa9.51□□□□□ -0.89
LIN28A-201ENST00000254231 GATA4P43694 442 aa9.51□□□□□ -0.89
LIN28A-201ENST00000254231 EFNA4P52798 201 aa9.51□□□□□ -0.89
LIN28A-201ENST00000254231 SURF2Q15527 256 aaPredicted RBP9.51□□□□□ -0.89
LIN28A-201ENST00000254231 FLYWCH2Q96CP2 140 aaKnown RBP9.51□□□□□ -0.89
LIN28A-201ENST00000254231 ARPC5LQ9BPX5 153 aa9.51□□□□□ -0.89
LIN28A-201ENST00000254231 AGMATQ9BSE5 352 aa9.51□□□□□ -0.89
LIN28A-201ENST00000254231 GSX1Q9H4S2 264 aaPredicted RBP9.51□□□□□ -0.89
LIN28A-201ENST00000254231 IGHV3-49A0A0A0MS15 119 aa9.5□□□□□ -0.89
LIN28A-201ENST00000254231 A0A1W2PPH5 198 aa9.5□□□□□ -0.89
LIN28A-201ENST00000254231 SRRM4A7MD48 611 aaKnown RBP9.5□□□□□ -0.89
LIN28A-201ENST00000254231 LIPFP07098 398 aa9.5□□□□□ -0.89
LIN28A-201ENST00000254231 RPL23AP62750 156 aaKnown RBP9.5□□□□□ -0.89
LIN28A-201ENST00000254231 ECSCRQ19T08 205 aa9.5□□□□□ -0.89
LIN28A-201ENST00000254231 ZNF251Q9BRH9 671 aa9.5□□□□□ -0.89
LIN28A-201ENST00000254231 hCG_1809904A0A1W2PP81 198 aa9.5□□□□□ -0.89
LIN28A-201ENST00000254231 A0A1W2PPE2 198 aa9.5□□□□□ -0.89
LIN28A-201ENST00000254231 RPS10-NUDT3A0A1W2PQS6 291 aa9.5□□□□□ -0.89
LIN28A-201ENST00000254231 A0A1W2PR64 198 aa9.5□□□□□ -0.89
LIN28A-201ENST00000254231 A0A1W2PRV1 198 aa9.5□□□□□ -0.89
LIN28A-201ENST00000254231 FAM74A7A6NL05 159 aa9.5□□□□□ -0.89
LIN28A-201ENST00000254231 RNF212BA8MTL3 300 aa9.5□□□□□ -0.89
LIN28A-201ENST00000254231 S100A6P06703 90 aa9.5□□□□□ -0.89
LIN28A-201ENST00000254231 TMEM11P17152 192 aa9.5□□□□□ -0.89
LIN28A-201ENST00000254231 MSMO1Q15800 293 aa9.5□□□□□ -0.89
LIN28A-201ENST00000254231 RTL8BQ17RB0 113 aa9.5□□□□□ -0.89
LIN28A-201ENST00000254231 FAM74A3Q4VXF1 159 aa9.5□□□□□ -0.89
LIN28A-201ENST00000254231 FAM122CQ6P4D5 195 aa9.5□□□□□ -0.89
LIN28A-201ENST00000254231 SCGB1C1Q8TD33 95 aa9.5□□□□□ -0.89
LIN28A-201ENST00000254231 MISP3Q96FF7 219 aa9.5□□□□□ -0.89
LIN28A-201ENST00000254231 PBDC1Q9BVG4 233 aa9.5□□□□□ -0.89
LIN28A-201ENST00000254231 LINC00312Q9Y6C7 94 aa9.5□□□□□ -0.89
LIN28A-201ENST00000254231 IGSF23A1L1A6 192 aa9.5□□□□□ -0.89
LIN28A-201ENST00000254231 J3QR06 171 aa9.5□□□□□ -0.89
LIN28A-201ENST00000254231 TIMM23O14925 209 aa9.5□□□□□ -0.89
LIN28A-201ENST00000254231 IGKV1D-33P01593 117 aa9.5□□□□□ -0.89
LIN28A-201ENST00000254231 IGKV1-33P01594 117 aa9.5□□□□□ -0.89
LIN28A-201ENST00000254231 OR13C7P0DN81 318 aa9.5□□□□□ -0.89
LIN28A-201ENST00000254231 ECI1P42126 302 aa9.5□□□□□ -0.89
LIN28A-201ENST00000254231 F2RL1P55085 397 aa9.5□□□□□ -0.89
LIN28A-201ENST00000254231 PRSS54Q6PEW0 395 aa9.5□□□□□ -0.89
LIN28A-201ENST00000254231 KCNRGQ8N5I3 272 aa9.5□□□□□ -0.89
LIN28A-201ENST00000254231 RBKSQ9H477 322 aa9.5□□□□□ -0.89
LIN28A-201ENST00000254231 RPH3ALQ9UNE2 315 aa9.5□□□□□ -0.89
LIN28A-201ENST00000254231 IGHV2-26A0A0B4J1V2 119 aa9.49□□□□□ -0.89
LIN28A-201ENST00000254231 ZNF729A6NN14 1252 aaPredicted RBP9.49□□□□□ -0.89
LIN28A-201ENST00000254231 H0Y980 276 aa9.49□□□□□ -0.89
LIN28A-201ENST00000254231 M0R036 132 aa9.49□□□□□ -0.89
LIN28A-201ENST00000254231 CAMLGP49069 296 aa9.49□□□□□ -0.89
LIN28A-201ENST00000254231 UBE2KP61086 200 aa9.49□□□□□ -0.89
LIN28A-201ENST00000254231 CLEC12BQ2HXU8 276 aa9.49□□□□□ -0.89
LIN28A-201ENST00000254231 VMO1Q7Z5L0 202 aa9.49□□□□□ -0.89
LIN28A-201ENST00000254231 DTD1Q8TEA8 209 aa9.49□□□□□ -0.89
LIN28A-201ENST00000254231 C20orf24Q9BUV8 137 aa9.49□□□□□ -0.89
LIN28A-201ENST00000254231 JPT1Q9UK76 154 aa9.49□□□□□ -0.89
LIN28A-201ENST00000254231 TNFSF18Q9UNG2 199 aa9.49□□□□□ -0.89
LIN28A-201ENST00000254231 HAX1O00165 279 aa9.49□□□□□ -0.89
LIN28A-201ENST00000254231 FBXL19-AS1Q494R0 122 aa9.49□□□□□ -0.89
LIN28A-201ENST00000254231 CBLN2Q8IUK8 224 aa9.49□□□□□ -0.89
LIN28A-201ENST00000254231 OR2G3Q8NGZ4 309 aa9.49□□□□□ -0.89
LIN28A-201ENST00000254231 CTNNBIP1Q9NSA3 81 aaPredicted RBP9.49□□□□□ -0.89
LIN28A-201ENST00000254231 HIF1ANQ9NWT6 349 aa9.49□□□□□ -0.89
LIN28A-201ENST00000254231 TPPPO94811 219 aa9.48□□□□□ -0.89
LIN28A-201ENST00000254231 CT45A6P0DMU7 189 aa9.48□□□□□ -0.89
LIN28A-201ENST00000254231 CT45A5P0DMU8 189 aa9.48□□□□□ -0.89
LIN28A-201ENST00000254231 CT45A7P0DMV0 189 aa9.48□□□□□ -0.89
LIN28A-201ENST00000254231 UCP1P25874 307 aa9.48□□□□□ -0.89
LIN28A-201ENST00000254231 EWSR1Q01844 656 aaKnown RBP eCLIP9.48□□□□□ -0.89
LIN28A-201ENST00000254231 OR4A47Q6IF82 309 aa9.48□□□□□ -0.89
LIN28A-201ENST00000254231 TMEM252Q8N6L7 170 aa9.48□□□□□ -0.89
LIN28A-201ENST00000254231 EIF5A2Q9GZV4 153 aaKnown RBP9.48□□□□□ -0.89
LIN28A-201ENST00000254231 TMEM133Q9H2Q1 129 aa9.48□□□□□ -0.89
LIN28A-201ENST00000254231 MIOXQ9UGB7 285 aa9.48□□□□□ -0.89
LIN28A-201ENST00000254231 E5RGE8 158 aa9.48□□□□□ -0.89
LIN28A-201ENST00000254231 RD3LP0DJH9 198 aa9.48□□□□□ -0.89
LIN28A-201ENST00000254231 HKR1P10072 659 aa9.48□□□□□ -0.89
LIN28A-201ENST00000254231 SLC51BQ86UW2 128 aa9.48□□□□□ -0.89
LIN28A-201ENST00000254231 BPIFCQ8NFQ6 507 aa9.48□□□□□ -0.89
LIN28A-201ENST00000254231 TMUB1Q9BVT8 246 aa9.48□□□□□ -0.89
LIN28A-201ENST00000254231 PATZ1Q9HBE1 687 aaKnown RBP9.48□□□□□ -0.89
LIN28A-201ENST00000254231 KRBOX1C9JBD0 128 aa9.48□□□□□ -0.89
LIN28A-201ENST00000254231 FCN1O00602 326 aa9.48□□□□□ -0.89
LIN28A-201ENST00000254231 NQO2P16083 231 aa9.48□□□□□ -0.89
LIN28A-201ENST00000254231 BRWD1-AS2P59051 145 aa9.48□□□□□ -0.89
LIN28A-201ENST00000254231 HEPN1Q6WQI6 88 aa9.48□□□□□ -0.89
LIN28A-201ENST00000254231 SFT2D1Q8WV19 159 aa9.48□□□□□ -0.89
LIN28A-201ENST00000254231 CLEC7AQ9BXN2 247 aa9.48□□□□□ -0.89
LIN28A-201ENST00000254231 IFNA5P01569 189 aa9.47□□□□□ -0.89
LIN28A-201ENST00000254231 SAA1P0DJI8 122 aaPredicted RBP9.47□□□□□ -0.89
LIN28A-201ENST00000254231 HNF1AP20823 631 aa9.47□□□□□ -0.89
LIN28A-201ENST00000254231 HTR1DP28221 377 aa9.47□□□□□ -0.89
LIN28A-201ENST00000254231 PPOXP50336 477 aa9.47□□□□□ -0.89
LIN28A-201ENST00000254231 EFNB3Q15768 340 aa9.47□□□□□ -0.89
LIN28A-201ENST00000254231 BAP18Q8IXM2 172 aa9.47□□□□□ -0.89
LIN28A-201ENST00000254231 OR10A7Q8NGE5 316 aa9.47□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms