RNA–Protein interactions for RNA: ENST00000249007.4

RFPL3-201, Transcript of ret finger protein like 3, humanhuman

TSL 1 (best) BASIC

Gene RFPL3, Length 1,488 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFPL3-201ENST00000249007 TPTE2P1Q5T6R2 138 aa9.29□□□□□ -0.92
RFPL3-201ENST00000249007 C16orf54Q6UWD8 224 aa9.29□□□□□ -0.92
RFPL3-201ENST00000249007 BTNL8Q6UX41 500 aa9.29□□□□□ -0.92
RFPL3-201ENST00000249007 RTN4RL2Q86UN3 420 aa9.29□□□□□ -0.92
RFPL3-201ENST00000249007 BATF2Q8N1L9 274 aa9.29□□□□□ -0.92
RFPL3-201ENST00000249007 OR2D3Q8NGH3 330 aa9.29□□□□□ -0.92
RFPL3-201ENST00000249007 OR5A2Q8NGI9 324 aa9.29□□□□□ -0.92
RFPL3-201ENST00000249007 OR52J3Q8NH60 311 aa9.29□□□□□ -0.92
RFPL3-201ENST00000249007 COMMD4Q9H0A8 199 aa9.29□□□□□ -0.92
RFPL3-201ENST00000249007 ATG5Q9H1Y0 275 aa9.29□□□□□ -0.92
RFPL3-201ENST00000249007 OR52A1Q9UKL2 312 aa9.29□□□□□ -0.92
RFPL3-201ENST00000249007 LINC01548A6NM66 108 aa9.28□□□□□ -0.92
RFPL3-201ENST00000249007 A8MZ25 164 aa9.28□□□□□ -0.92
RFPL3-201ENST00000249007 H3BSH0 61 aa9.28□□□□□ -0.92
RFPL3-201ENST00000249007 AKAIN1P0CW23 69 aa9.28□□□□□ -0.92
RFPL3-201ENST00000249007 SULT1A2P50226 295 aa9.28□□□□□ -0.92
RFPL3-201ENST00000249007 HES1Q14469 280 aa9.28□□□□□ -0.92
RFPL3-201ENST00000249007 COA6Q5JTJ3 125 aaKnown RBP9.28□□□□□ -0.92
RFPL3-201ENST00000249007 ASPHD1Q5U4P2 390 aa9.28□□□□□ -0.92
RFPL3-201ENST00000249007 LYPD6Q86Y78 171 aa9.28□□□□□ -0.92
RFPL3-201ENST00000249007 FAM71E2Q8N5Q1 922 aa9.28□□□□□ -0.92
RFPL3-201ENST00000249007 TPRX1Q8N7U7 411 aa9.28□□□□□ -0.92
RFPL3-201ENST00000249007 OR52I2Q8NH67 350 aa9.28□□□□□ -0.92
RFPL3-201ENST00000249007 RNF133Q8WVZ7 376 aa9.28□□□□□ -0.92
RFPL3-201ENST00000249007 MTFP1Q9UDX5 166 aa9.28□□□□□ -0.92
RFPL3-201ENST00000249007 POLDIP2Q9Y2S7 368 aa9.28□□□□□ -0.92
RFPL3-201ENST00000249007 PKHD1P08F94 4074 aa9.28□□□□□ -0.92
RFPL3-201ENST00000249007 TRBV4-1A0A0J9YWV2 114 aa9.28□□□□□ -0.92
RFPL3-201ENST00000249007 SMIM30A4D0T7 59 aa9.28□□□□□ -0.92
RFPL3-201ENST00000249007 FAM90A18PA6NE21 464 aa9.28□□□□□ -0.92
RFPL3-201ENST00000249007 FAM90A16PA6NEW6 464 aa9.28□□□□□ -0.92
RFPL3-201ENST00000249007 FAM90A20PA6NIJ5 464 aa9.28□□□□□ -0.92
RFPL3-201ENST00000249007 FAM90A9PA6NNJ1 464 aa9.28□□□□□ -0.92
RFPL3-201ENST00000249007 FAM90A12PA8MX19 464 aa9.28□□□□□ -0.92
RFPL3-201ENST00000249007 FAM90A5PA8MXJ8 464 aa9.28□□□□□ -0.92
RFPL3-201ENST00000249007 OOSP1A8MZH6 123 aa9.28□□□□□ -0.92
RFPL3-201ENST00000249007 BUB1B-PAK6H3BSN5 160 aa9.28□□□□□ -0.92
RFPL3-201ENST00000249007 J3QT63 122 aa9.28□□□□□ -0.92
RFPL3-201ENST00000249007 OVOL1O14753 267 aa9.28□□□□□ -0.92
RFPL3-201ENST00000249007 UCHL1P09936 223 aa9.28□□□□□ -0.92
RFPL3-201ENST00000249007 FAM90A15PP0C7V4 464 aa9.28□□□□□ -0.92
RFPL3-201ENST00000249007 FAM90A13PP0C7W8 464 aa9.28□□□□□ -0.92
RFPL3-201ENST00000249007 FAM90A14PP0C7W9 464 aa9.28□□□□□ -0.92
RFPL3-201ENST00000249007 FAM90A24PP0C7X0 464 aa9.28□□□□□ -0.92
RFPL3-201ENST00000249007 SULT1A1P50225 295 aa9.28□□□□□ -0.92
RFPL3-201ENST00000249007 CLDN12P56749 244 aa9.28□□□□□ -0.92
RFPL3-201ENST00000249007 ZNF616Q08AN1 781 aa9.28□□□□□ -0.92
RFPL3-201ENST00000249007 UBE2V2Q15819 145 aa9.28□□□□□ -0.92
RFPL3-201ENST00000249007 AKIRIN2Q53H80 203 aa9.28□□□□□ -0.92
RFPL3-201ENST00000249007 LY6G6FQ5SQ64 297 aa9.28□□□□□ -0.92
RFPL3-201ENST00000249007 PRAMEF5Q5TYX0 476 aa9.28□□□□□ -0.92
RFPL3-201ENST00000249007 PLCXD3Q63HM9 321 aa9.28□□□□□ -0.92
RFPL3-201ENST00000249007 TRAPPC6BQ86SZ2 158 aa9.28□□□□□ -0.92
RFPL3-201ENST00000249007 THNSL2Q86YJ6 484 aa9.28□□□□□ -0.92
RFPL3-201ENST00000249007 SGPP2Q8IWX5 399 aa9.28□□□□□ -0.92
RFPL3-201ENST00000249007 Q8N1Y9 231 aa9.28□□□□□ -0.92
RFPL3-201ENST00000249007 RPP25LQ8N5L8 163 aaKnown RBP9.28□□□□□ -0.92
RFPL3-201ENST00000249007 LFNGQ8NES3 379 aa9.28□□□□□ -0.92
RFPL3-201ENST00000249007 OR1N2Q8NGR9 330 aa9.28□□□□□ -0.92
RFPL3-201ENST00000249007 OR10R2Q8NGX6 335 aa9.28□□□□□ -0.92
RFPL3-201ENST00000249007 HES4Q9HCC6 221 aa9.28□□□□□ -0.92
RFPL3-201ENST00000249007 RD3LP0DJH9 198 aa9.27□□□□□ -0.93
RFPL3-201ENST00000249007 CNTFRP26992 372 aa9.27□□□□□ -0.93
RFPL3-201ENST00000249007 G0S2P27469 103 aa9.27□□□□□ -0.93
RFPL3-201ENST00000249007 TSPAN31Q12999 210 aa9.27□□□□□ -0.93
RFPL3-201ENST00000249007 MADCAM1Q13477 382 aa9.27□□□□□ -0.93
RFPL3-201ENST00000249007 RBM39Q14498 530 aaKnown RBP9.27□□□□□ -0.93
RFPL3-201ENST00000249007 HLA-DRB5Q30154 266 aa9.27□□□□□ -0.93
RFPL3-201ENST00000249007 SCGB2B2Q4G0G5 96 aa9.27□□□□□ -0.93
RFPL3-201ENST00000249007 DHRS11Q6UWP2 260 aa9.27□□□□□ -0.93
RFPL3-201ENST00000249007 CEACAM19Q7Z692 300 aa9.27□□□□□ -0.93
RFPL3-201ENST00000249007 LRRTM1Q86UE6 522 aa9.27□□□□□ -0.93
RFPL3-201ENST00000249007 CCDC54Q8NEL0 328 aa9.27□□□□□ -0.93
RFPL3-201ENST00000249007 ASB17Q8WXJ9 295 aa9.27□□□□□ -0.93
RFPL3-201ENST00000249007 DCUN1D4Q92564 292 aa9.27□□□□□ -0.93
RFPL3-201ENST00000249007 ABHD6Q9BV23 337 aa9.27□□□□□ -0.93
RFPL3-201ENST00000249007 H2AFY2Q9P0M6 372 aaPredicted RBP9.27□□□□□ -0.93
RFPL3-201ENST00000249007 B4DEV8 164 aa9.26□□□□□ -0.93
RFPL3-201ENST00000249007 PPP5D1E7EU14 171 aa9.26□□□□□ -0.93
RFPL3-201ENST00000249007 LY6LH3BQJ8 138 aa9.26□□□□□ -0.93
RFPL3-201ENST00000249007 XRCC3O43542 346 aa9.26□□□□□ -0.93
RFPL3-201ENST00000249007 YIF1AO95070 293 aa9.26□□□□□ -0.93
RFPL3-201ENST00000249007 GYPBP06028 91 aa9.26□□□□□ -0.93
RFPL3-201ENST00000249007 H2BFMP0C1H6 154 aa9.26□□□□□ -0.93
RFPL3-201ENST00000249007 ATF1P18846 271 aa9.26□□□□□ -0.93
RFPL3-201ENST00000249007 TBPP20226 339 aa9.26□□□□□ -0.93
RFPL3-201ENST00000249007 CDK2P24941 298 aa9.26□□□□□ -0.93
RFPL3-201ENST00000249007 GPR12P47775 334 aa9.26□□□□□ -0.93
RFPL3-201ENST00000249007 NDUFA6P56556 154 aa9.26□□□□□ -0.93
RFPL3-201ENST00000249007 RANP62826 216 aaKnown RBP9.26□□□□□ -0.93
RFPL3-201ENST00000249007 KHDC3LQ587J8 217 aa9.26□□□□□ -0.93
RFPL3-201ENST00000249007 DMKNQ6E0U4 476 aaPredicted RBP9.26□□□□□ -0.93
RFPL3-201ENST00000249007 SLC25A24Q6NUK1 477 aa9.26□□□□□ -0.93
RFPL3-201ENST00000249007 ZNF529Q6P280 563 aa9.26□□□□□ -0.93
RFPL3-201ENST00000249007 CFAP161Q6P656 301 aa9.26□□□□□ -0.93
RFPL3-201ENST00000249007 OR6K6Q8NGW6 343 aa9.26□□□□□ -0.93
RFPL3-201ENST00000249007 RPEQ96AT9 228 aa9.26□□□□□ -0.93
RFPL3-201ENST00000249007 PACRGQ96M98 296 aaPredicted RBP9.26□□□□□ -0.93
RFPL3-201ENST00000249007 RSRP1Q9BUV0 290 aa9.26□□□□□ -0.93
RFPL3-201ENST00000249007 PBDC1Q9BVG4 233 aa9.26□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms