RNA–Protein interactions for RNA: ENST00000241704.7

COPA-201, Transcript of coatomer protein complex subunit alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COPA, Length 4,789 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPA-201ENST00000241704 J3QR89 54 aa9.34□□□□□ -0.91
COPA-201ENST00000241704 COX7A2P2O60397 106 aa9.34□□□□□ -0.91
COPA-201ENST00000241704 UCP3P55916 312 aa9.34□□□□□ -0.91
COPA-201ENST00000241704 LHFPL1Q86WI0 220 aa9.34□□□□□ -0.91
COPA-201ENST00000241704 BCL2L2Q92843 193 aaPredicted RBP9.34□□□□□ -0.91
COPA-201ENST00000241704 COL25A1Q9BXS0 654 aaPredicted RBP9.34□□□□□ -0.91
COPA-201ENST00000241704 CCL28Q9NRJ3 127 aa9.34□□□□□ -0.91
COPA-201ENST00000241704 SCN8AQ9UQD0 1980 aa9.34□□□□□ -0.91
COPA-201ENST00000241704 TRAV39A0A0B4J263 110 aa9.34□□□□□ -0.91
COPA-201ENST00000241704 PAGE4O60829 102 aa9.34□□□□□ -0.91
COPA-201ENST00000241704 CLPSP04118 112 aa9.34□□□□□ -0.91
COPA-201ENST00000241704 PDLIM4P50479 330 aa9.34□□□□□ -0.91
COPA-201ENST00000241704 NRN1LQ496H8 165 aa9.34□□□□□ -0.91
COPA-201ENST00000241704 FFAR4Q5NUL3 377 aa9.34□□□□□ -0.91
COPA-201ENST00000241704 RPRMQ9NS64 109 aa9.34□□□□□ -0.91
COPA-201ENST00000241704 WASHC3Q9Y3C0 194 aa9.34□□□□□ -0.91
COPA-201ENST00000241704 NOTCH3Q9UM47 2321 aa9.34□□□□□ -0.91
COPA-201ENST00000241704 CXorf66Q5JRM2 361 aaPredicted RBP9.34□□□□□ -0.91
COPA-201ENST00000241704 TIMM23BQ5SRD1 257 aa9.34□□□□□ -0.91
COPA-201ENST00000241704 LDLRAD2Q5SZI1 272 aa9.34□□□□□ -0.91
COPA-201ENST00000241704 VWA1Q6PCB0 445 aa9.34□□□□□ -0.91
COPA-201ENST00000241704 IMMP2LQ96T52 175 aa9.34□□□□□ -0.91
COPA-201ENST00000241704 WDR61Q9GZS3 305 aaKnown RBP9.34□□□□□ -0.91
COPA-201ENST00000241704 FBLN5Q9UBX5 448 aa9.34□□□□□ -0.91
COPA-201ENST00000241704 CTXND1A0A1B0GTU2 59 aa9.33□□□□□ -0.92
COPA-201ENST00000241704 KIR2DS2P43631 304 aa9.33□□□□□ -0.92
COPA-201ENST00000241704 AESQ08117 197 aa9.33□□□□□ -0.92
COPA-201ENST00000241704 PMCHL1Q16048 86 aa9.33□□□□□ -0.92
COPA-201ENST00000241704 GRAMD2BQ96HH9 432 aa9.33□□□□□ -0.92
COPA-201ENST00000241704 SNURFLB1AK76 121 aa9.33□□□□□ -0.92
COPA-201ENST00000241704 B9A039 149 aa9.33□□□□□ -0.92
COPA-201ENST00000241704 J3QW42 95 aa9.33□□□□□ -0.92
COPA-201ENST00000241704 SMAD7O15105 426 aaKnown RBP9.33□□□□□ -0.92
COPA-201ENST00000241704 RPEL1Q2QD12 228 aa9.33□□□□□ -0.92
COPA-201ENST00000241704 IFNL4K9M1U5 179 aa9.33□□□□□ -0.92
COPA-201ENST00000241704 PDE6DO43924 150 aa9.33□□□□□ -0.92
COPA-201ENST00000241704 RPL23P62829 140 aaKnown RBP9.33□□□□□ -0.92
COPA-201ENST00000241704 HIST3H3Q16695 136 aa9.33□□□□□ -0.92
COPA-201ENST00000241704 PKIBQ9C010 78 aa9.33□□□□□ -0.92
COPA-201ENST00000241704 MGST3O14880 152 aa9.33□□□□□ -0.92
COPA-201ENST00000241704 VENTXO95231 258 aa9.33□□□□□ -0.92
COPA-201ENST00000241704 IER3P46695 156 aa9.33□□□□□ -0.92
COPA-201ENST00000241704 COX19Q49B96 90 aa9.33□□□□□ -0.92
COPA-201ENST00000241704 ACTL10Q5JWF8 245 aa9.33□□□□□ -0.92
COPA-201ENST00000241704 SPSB3Q6PJ21 355 aa9.33□□□□□ -0.92
COPA-201ENST00000241704 OR52L2PQ8NGH6 319 aa9.33□□□□□ -0.92
COPA-201ENST00000241704 AURKAIP1Q9NWT8 199 aaPredicted RBP9.33□□□□□ -0.92
COPA-201ENST00000241704 NIT1Q86X76 327 aa9.32□□□□□ -0.92
COPA-201ENST00000241704 TMEM222Q9H0R3 208 aa9.32□□□□□ -0.92
COPA-201ENST00000241704 MRPL18Q9H0U6 180 aaKnown RBP9.32□□□□□ -0.92
COPA-201ENST00000241704 ZNF835Q9Y2P0 537 aa9.32□□□□□ -0.92
COPA-201ENST00000241704 SYNGR2O43760 224 aa9.32□□□□□ -0.92
COPA-201ENST00000241704 FAM162BQ5T6X4 162 aa9.32□□□□□ -0.92
COPA-201ENST00000241704 SAXO1Q8IYX7 474 aa9.32□□□□□ -0.92
COPA-201ENST00000241704 TPRX1Q8N7U7 411 aa9.32□□□□□ -0.92
COPA-201ENST00000241704 ZBTB34Q8NCN2 500 aa9.32□□□□□ -0.92
COPA-201ENST00000241704 OR51G1Q8NGK1 321 aa9.32□□□□□ -0.92
COPA-201ENST00000241704 MRGPRFQ96AM1 343 aa9.32□□□□□ -0.92
COPA-201ENST00000241704 CDC42EP3Q9UKI2 254 aa9.32□□□□□ -0.92
COPA-201ENST00000241704 MSRB2Q9Y3D2 182 aa9.32□□□□□ -0.92
COPA-201ENST00000241704 KIR2DL5BA0A0G2JN68 375 aa9.32□□□□□ -0.92
COPA-201ENST00000241704 KIR2DL5BA0A0G2JPC4 375 aa9.32□□□□□ -0.92
COPA-201ENST00000241704 ZNF826PQ6ZT77 177 aa9.32□□□□□ -0.92
COPA-201ENST00000241704 KIR2DL5AQ8N109 375 aa9.32□□□□□ -0.92
COPA-201ENST00000241704 KLF14Q8TD94 323 aaPredicted RBP9.32□□□□□ -0.92
COPA-201ENST00000241704 HSD17B10Q99714 261 aaKnown RBP9.32□□□□□ -0.92
COPA-201ENST00000241704 ZNF430Q9H8G1 570 aaPredicted RBP9.32□□□□□ -0.92
COPA-201ENST00000241704 DEPPQ9NTK1 212 aa9.32□□□□□ -0.92
COPA-201ENST00000241704 TIMM9Q9Y5J7 89 aa9.32□□□□□ -0.92
COPA-201ENST00000241704 CEACAM18A8MTB9 384 aa9.32□□□□□ -0.92
COPA-201ENST00000241704 USF1P22415 310 aaPredicted RBP9.32□□□□□ -0.92
COPA-201ENST00000241704 PERPQ96FX8 193 aa9.32□□□□□ -0.92
COPA-201ENST00000241704 Q96M66 194 aa9.32□□□□□ -0.92
COPA-201ENST00000241704 MTCH1Q9NZJ7 389 aa9.32□□□□□ -0.92
COPA-201ENST00000241704 CLCF1Q9UBD9 225 aa9.32□□□□□ -0.92
COPA-201ENST00000241704 SYNGR1O43759 233 aa9.31□□□□□ -0.92
COPA-201ENST00000241704 APOBEC3AP31941 199 aaPredicted RBP9.31□□□□□ -0.92
COPA-201ENST00000241704 CDC34P49427 236 aaPredicted RBP9.31□□□□□ -0.92
COPA-201ENST00000241704 GFRA1P56159 465 aa9.31□□□□□ -0.92
COPA-201ENST00000241704 FLYWCH2Q96CP2 140 aaKnown RBP9.31□□□□□ -0.92
COPA-201ENST00000241704 HARBI1Q96MB7 349 aa9.31□□□□□ -0.92
COPA-201ENST00000241704 ZNF714Q96N38 554 aa9.31□□□□□ -0.92
COPA-201ENST00000241704 GSX1Q9H4S2 264 aaPredicted RBP9.31□□□□□ -0.92
COPA-201ENST00000241704 TICRRQ7Z2Z1 1910 aa9.31□□□□□ -0.92
COPA-201ENST00000241704 NEURL1O76050 574 aa9.31□□□□□ -0.92
COPA-201ENST00000241704 CLDN14O95500 239 aa9.31□□□□□ -0.92
COPA-201ENST00000241704 TBR1Q16650 682 aa9.31□□□□□ -0.92
COPA-201ENST00000241704 ACSF3Q4G176 576 aaPredicted RBP9.31□□□□□ -0.92
COPA-201ENST00000241704 MED13LQ71F56 2210 aa9.31□□□□□ -0.92
COPA-201ENST00000241704 TRAV1-1A0A0B4J248 108 aa9.31□□□□□ -0.92
COPA-201ENST00000241704 EFNA2O43921 213 aa9.31□□□□□ -0.92
COPA-201ENST00000241704 SLC25A6P12236 298 aa9.31□□□□□ -0.92
COPA-201ENST00000241704 LHX2P50458 406 aa9.31□□□□□ -0.92
COPA-201ENST00000241704 AARDQ4LEZ3 155 aa9.31□□□□□ -0.92
COPA-201ENST00000241704 ZNF837Q96EG3 531 aaPredicted RBP9.31□□□□□ -0.92
COPA-201ENST00000241704 PSMG3Q9BT73 122 aaPredicted RBP9.31□□□□□ -0.92
COPA-201ENST00000241704 TMEM147Q9BVK8 224 aa9.31□□□□□ -0.92
COPA-201ENST00000241704 PLA2G2EQ9NZK7 142 aa9.31□□□□□ -0.92
COPA-201ENST00000241704 TDGF1P13385 188 aa9.31□□□□□ -0.92
COPA-201ENST00000241704 CLDN18P56856 261 aa9.31□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms