RNA–Protein interactions for RNA: ENST00000230085.12

SNX3-201, Transcript of sorting nexin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX3, Length 1,755 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3-201ENST00000230085 SNRPCP09234 159 aaKnown RBP17.1■□□□□ 0.33
SNX3-201ENST00000230085 TUBG1P23258 451 aa17.1■□□□□ 0.33
SNX3-201ENST00000230085 NPPCP23582 126 aa17.1■□□□□ 0.33
SNX3-201ENST00000230085 CATR1Q13166 79 aa17.1■□□□□ 0.33
SNX3-201ENST00000230085 USF2Q15853 346 aaPredicted RBP17.1■□□□□ 0.33
SNX3-201ENST00000230085 OR8G2PQ6IF36 304 aa17.1■□□□□ 0.33
SNX3-201ENST00000230085 MRPL41Q8IXM3 137 aaKnown RBP17.1■□□□□ 0.33
SNX3-201ENST00000230085 ZNF709Q8N972 641 aa17.1■□□□□ 0.33
SNX3-201ENST00000230085 OR1K1Q8NGR3 316 aa17.1■□□□□ 0.33
SNX3-201ENST00000230085 ZNF488Q96MN9 340 aa17.1■□□□□ 0.33
SNX3-201ENST00000230085 RTL8AQ9BWD3 113 aa17.1■□□□□ 0.33
SNX3-201ENST00000230085 C12orf49Q9H741 205 aa17.1■□□□□ 0.33
SNX3-201ENST00000230085 WDR83OSQ9Y284 106 aa17.1■□□□□ 0.33
SNX3-201ENST00000230085 SPTBN1Q01082 2364 aaKnown RBP17.09■□□□□ 0.33
SNX3-201ENST00000230085 USP9XQ93008 2570 aaPredicted RBP17.09■□□□□ 0.33
SNX3-201ENST00000230085 A0A1W2PR80 420 aa17.09■□□□□ 0.33
SNX3-201ENST00000230085 ZNF705GA8MUZ8 300 aaPredicted RBP17.09■□□□□ 0.33
SNX3-201ENST00000230085 C11orf94C9JXX5 98 aa17.09■□□□□ 0.33
SNX3-201ENST00000230085 EREGO14944 169 aa17.09■□□□□ 0.33
SNX3-201ENST00000230085 OR2H2O95918 312 aa17.09■□□□□ 0.33
SNX3-201ENST00000230085 CHRNB4P30926 498 aa17.09■□□□□ 0.33
SNX3-201ENST00000230085 ITLN2Q8WWU7 325 aaPredicted RBP17.09■□□□□ 0.33
SNX3-201ENST00000230085 SFXN3Q9BWM7 321 aa17.09■□□□□ 0.33
SNX3-201ENST00000230085 SNHG12Q9BXW3 62 aa17.09■□□□□ 0.33
SNX3-201ENST00000230085 TRAPPC2LQ9UL33 140 aa17.09■□□□□ 0.33
SNX3-201ENST00000230085 KCNS2Q9ULS6 477 aa17.09■□□□□ 0.33
SNX3-201ENST00000230085 TENM4Q6N022 2769 aa17.08■□□□□ 0.33
SNX3-201ENST00000230085 ODAMA1E959 279 aa17.08■□□□□ 0.33
SNX3-201ENST00000230085 PAGE4O60829 102 aa17.08■□□□□ 0.33
SNX3-201ENST00000230085 CDC34P49427 236 aaPredicted RBP17.08■□□□□ 0.33
SNX3-201ENST00000230085 DTD1Q8TEA8 209 aa17.08■□□□□ 0.33
SNX3-201ENST00000230085 TMEM68Q96MH6 324 aa17.08■□□□□ 0.33
SNX3-201ENST00000230085 C20orf144Q9BQM9 153 aa17.08■□□□□ 0.33
SNX3-201ENST00000230085 FASNP49327 2511 aaKnown RBP17.08■□□□□ 0.32
SNX3-201ENST00000230085 CGAP01215 116 aa17.07■□□□□ 0.32
SNX3-201ENST00000230085 CCNOP22674 350 aa17.07■□□□□ 0.32
SNX3-201ENST00000230085 WNT5AP41221 380 aa17.07■□□□□ 0.32
SNX3-201ENST00000230085 PAFAH1B2P68402 229 aa17.07■□□□□ 0.32
SNX3-201ENST00000230085 NAGKQ9UJ70 344 aa17.07■□□□□ 0.32
SNX3-201ENST00000230085 RBM7Q9Y580 266 aaKnown RBP17.07■□□□□ 0.32
SNX3-201ENST00000230085 OR4A8P0C604 315 aa17.07■□□□□ 0.32
SNX3-201ENST00000230085 TEX38Q6PEX7 206 aa17.07■□□□□ 0.32
SNX3-201ENST00000230085 FIP1L1Q6UN15 594 aaKnown RBP17.07■□□□□ 0.32
SNX3-201ENST00000230085 HES4Q9HCC6 221 aa17.07■□□□□ 0.32
SNX3-201ENST00000230085 PLSCR4Q9NRQ2 329 aa17.07■□□□□ 0.32
SNX3-201ENST00000230085 ELOVL5Q9NYP7 299 aa17.07■□□□□ 0.32
SNX3-201ENST00000230085 LY96Q9Y6Y9 160 aa17.07■□□□□ 0.32
SNX3-201ENST00000230085 A0A096LPE4 126 aa17.06■□□□□ 0.32
SNX3-201ENST00000230085 A0A1W2PPZ6 126 aa17.06■□□□□ 0.32
SNX3-201ENST00000230085 SH2D1BO14796 132 aa17.06■□□□□ 0.32
SNX3-201ENST00000230085 YPEL1O60688 119 aa17.06■□□□□ 0.32
SNX3-201ENST00000230085 RHBDL1O75783 438 aa17.06■□□□□ 0.32
SNX3-201ENST00000230085 GNB1P62873 340 aa17.06■□□□□ 0.32
SNX3-201ENST00000230085 GABRA6Q16445 453 aa17.06■□□□□ 0.32
SNX3-201ENST00000230085 PDLIM3Q53GG5 364 aaPredicted RBP17.06■□□□□ 0.32
SNX3-201ENST00000230085 SLC35E4Q6ICL7 350 aa17.06■□□□□ 0.32
SNX3-201ENST00000230085 APH1AQ96BI3 265 aa17.06■□□□□ 0.32
SNX3-201ENST00000230085 YPEL2Q96QA6 119 aa17.06■□□□□ 0.32
SNX3-201ENST00000230085 TMEM204Q9BSN7 226 aa17.06■□□□□ 0.32
SNX3-201ENST00000230085 OPN3Q9H1Y3 402 aaPredicted RBP17.06■□□□□ 0.32
SNX3-201ENST00000230085 POLR3KQ9Y2Y1 108 aaPredicted RBP17.06■□□□□ 0.32
SNX3-201ENST00000230085 TRAPPC1Q9Y5R8 145 aa17.06■□□□□ 0.32
SNX3-201ENST00000230085 FAM90A27PA6NNH2 459 aa17.05■□□□□ 0.32
SNX3-201ENST00000230085 LILRA1O75019 489 aa17.05■□□□□ 0.32
SNX3-201ENST00000230085 IGHV3-9P01782 118 aa17.05■□□□□ 0.32
SNX3-201ENST00000230085 CCL2P13500 99 aa17.05■□□□□ 0.32
SNX3-201ENST00000230085 GAGE1Q13065 139 aa17.05■□□□□ 0.32
SNX3-201ENST00000230085 ZNF808Q8N4W9 903 aaPredicted RBP17.05■□□□□ 0.32
SNX3-201ENST00000230085 GATAD1Q8WUU5 269 aa17.05■□□□□ 0.32
SNX3-201ENST00000230085 PROCRQ9UNN8 238 aa17.05■□□□□ 0.32
SNX3-201ENST00000230085 TMEM30CPA0ZSE6 113 aa17.05■□□□□ 0.32
SNX3-201ENST00000230085 ZNF16P17020 682 aaPredicted RBP17.05■□□□□ 0.32
SNX3-201ENST00000230085 TFF3Q07654 80 aa17.05■□□□□ 0.32
SNX3-201ENST00000230085 FAM78BQ5VT40 261 aa17.05■□□□□ 0.32
SNX3-201ENST00000230085 OR1L1Q8NH94 360 aa17.05■□□□□ 0.32
SNX3-201ENST00000230085 BRWD1-AS2P59051 145 aa17.04■□□□□ 0.32
SNX3-201ENST00000230085 TEX43Q6ZNM6 134 aa17.04■□□□□ 0.32
SNX3-201ENST00000230085 C5orf30Q96GV9 206 aa17.04■□□□□ 0.32
SNX3-201ENST00000230085 SFRP2Q96HF1 295 aa17.04■□□□□ 0.32
SNX3-201ENST00000230085 OOEPA6NGQ2 149 aa17.03■□□□□ 0.32
SNX3-201ENST00000230085 A8MXE2 369 aa17.03■□□□□ 0.32
SNX3-201ENST00000230085 RAC2P15153 192 aa17.03■□□□□ 0.32
SNX3-201ENST00000230085 OPRK1P41145 380 aa17.03■□□□□ 0.32
SNX3-201ENST00000230085 FOXG1P55316 489 aaPredicted RBP17.03■□□□□ 0.32
SNX3-201ENST00000230085 RANP62826 216 aaKnown RBP17.03■□□□□ 0.32
SNX3-201ENST00000230085 WDR86Q86TI4 376 aa17.03■□□□□ 0.32
SNX3-201ENST00000230085 SCCPDHQ8NBX0 429 aa17.03■□□□□ 0.32
SNX3-201ENST00000230085 NANOS1Q8WY41 292 aaKnown RBP17.03■□□□□ 0.32
SNX3-201ENST00000230085 GALMQ96C23 342 aa17.03■□□□□ 0.32
SNX3-201ENST00000230085 JKAMPQ9P055 326 aa17.03■□□□□ 0.32
SNX3-201ENST00000230085 CLN8Q9UBY8 286 aa17.03■□□□□ 0.32
SNX3-201ENST00000230085 GCN1Q92616 2671 aaKnown RBP17.03■□□□□ 0.32
SNX3-201ENST00000230085 A0A0U1RQK1 487 aa17.02■□□□□ 0.32
SNX3-201ENST00000230085 ZNF320A2RRD8 509 aa17.02■□□□□ 0.32
SNX3-201ENST00000230085 C15orf62A8K5M9 175 aa17.02■□□□□ 0.32
SNX3-201ENST00000230085 RAMP3O60896 148 aa17.02■□□□□ 0.32
SNX3-201ENST00000230085 CA6P23280 308 aa17.02■□□□□ 0.32
SNX3-201ENST00000230085 RPL30P62888 115 aaKnown RBP17.02■□□□□ 0.32
SNX3-201ENST00000230085 ZNF474Q6S9Z5 364 aaPredicted RBP17.02■□□□□ 0.32
SNX3-201ENST00000230085 HSD17B10Q99714 261 aaKnown RBP17.02■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms