RNA–Protein interactions for RNA: ENST00000229265.10

CDCA3-201, Transcript of cell division cycle associated 3, humanhuman

TSL 2 BASIC

Gene CDCA3, Length 1,047 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3-201ENST00000229265 RTL8BQ17RB0 113 aa8.73□□□□□ -1.01
CDCA3-201ENST00000229265 VWC2Q2TAL6 325 aa8.73□□□□□ -1.01
CDCA3-201ENST00000229265 FAM201AQ5SY85 155 aa8.73□□□□□ -1.01
CDCA3-201ENST00000229265 C1orf122Q6ZSJ8 110 aa8.73□□□□□ -1.01
CDCA3-201ENST00000229265 ZNF833PQ6ZTB9 187 aa8.73□□□□□ -1.01
CDCA3-201ENST00000229265 DTX2Q86UW9 622 aa8.73□□□□□ -1.01
CDCA3-201ENST00000229265 PRIMA1Q86XR5 153 aa8.73□□□□□ -1.01
CDCA3-201ENST00000229265 VSTM2AQ8TAG5 236 aa8.73□□□□□ -1.01
CDCA3-201ENST00000229265 UBALD1Q8TB05 177 aa8.73□□□□□ -1.01
CDCA3-201ENST00000229265 DTD1Q8TEA8 209 aa8.73□□□□□ -1.01
CDCA3-201ENST00000229265 PCNPQ8WW12 178 aaKnown RBP8.73□□□□□ -1.01
CDCA3-201ENST00000229265 RAB1CQ92928 201 aa8.73□□□□□ -1.01
CDCA3-201ENST00000229265 RBMXL1Q96E39 390 aaKnown RBP8.73□□□□□ -1.01
CDCA3-201ENST00000229265 SMIM3Q9BZL3 60 aa8.73□□□□□ -1.01
CDCA3-201ENST00000229265 UQCC1Q9NVA1 299 aa8.73□□□□□ -1.01
CDCA3-201ENST00000229265 PRNDQ9UKY0 176 aa8.73□□□□□ -1.01
CDCA3-201ENST00000229265 CARHSP1Q9Y2V2 147 aaKnown RBP8.73□□□□□ -1.01
CDCA3-201ENST00000229265 ARFGEF3Q5TH69 2177 aa8.73□□□□□ -1.01
CDCA3-201ENST00000229265 CHD3Q12873 2000 aaKnown RBP8.72□□□□□ -1.01
CDCA3-201ENST00000229265 OVOL3O00110 214 aa8.72□□□□□ -1.01
CDCA3-201ENST00000229265 DVL1O14640 695 aa8.72□□□□□ -1.01
CDCA3-201ENST00000229265 SMAD7O15105 426 aaKnown RBP8.72□□□□□ -1.01
CDCA3-201ENST00000229265 TSPAN9O75954 239 aa8.72□□□□□ -1.01
CDCA3-201ENST00000229265 CST7O76096 145 aa8.72□□□□□ -1.01
CDCA3-201ENST00000229265 LY6HO94772 140 aa8.72□□□□□ -1.01
CDCA3-201ENST00000229265 PRH1P02810 166 aa8.72□□□□□ -1.01
CDCA3-201ENST00000229265 IL3RAP26951 378 aa8.72□□□□□ -1.01
CDCA3-201ENST00000229265 TAGLN2P37802 199 aaKnown RBP8.72□□□□□ -1.01
CDCA3-201ENST00000229265 SNCAP37840 140 aa8.72□□□□□ -1.01
CDCA3-201ENST00000229265 LGALS7P47929 136 aa8.72□□□□□ -1.01
CDCA3-201ENST00000229265 CAMLGP49069 296 aa8.72□□□□□ -1.01
CDCA3-201ENST00000229265 HSPE1P61604 102 aaKnown RBP8.72□□□□□ -1.01
CDCA3-201ENST00000229265 RELBQ01201 579 aa8.72□□□□□ -1.01
CDCA3-201ENST00000229265 ZNF816Q0VGE8 651 aaPredicted RBP8.72□□□□□ -1.01
CDCA3-201ENST00000229265 AKR1C8PQ5T2L2 129 aa8.72□□□□□ -1.01
CDCA3-201ENST00000229265 Q6ZRG5 221 aa8.72□□□□□ -1.01
CDCA3-201ENST00000229265 TCF23Q7RTU1 214 aa8.72□□□□□ -1.01
CDCA3-201ENST00000229265 SVBPQ8N300 66 aa8.72□□□□□ -1.01
CDCA3-201ENST00000229265 FAM216BQ8N7L0 139 aa8.72□□□□□ -1.01
CDCA3-201ENST00000229265 BPIFCQ8NFQ6 507 aa8.72□□□□□ -1.01
CDCA3-201ENST00000229265 OR5AN1Q8NGI8 311 aa8.72□□□□□ -1.01
CDCA3-201ENST00000229265 OR9G1Q8NH87 305 aa8.72□□□□□ -1.01
CDCA3-201ENST00000229265 MBD3L1Q8WWY6 194 aa8.72□□□□□ -1.01
CDCA3-201ENST00000229265 TIMD4Q96H15 378 aa8.72□□□□□ -1.01
CDCA3-201ENST00000229265 RNF5Q99942 180 aa8.72□□□□□ -1.01
CDCA3-201ENST00000229265 HRH4Q9H3N8 390 aa8.72□□□□□ -1.01
CDCA3-201ENST00000229265 UNKLQ9H9P5 680 aaKnown RBP8.72□□□□□ -1.01
CDCA3-201ENST00000229265 C19orf12Q9NSK7 152 aa8.72□□□□□ -1.01
CDCA3-201ENST00000229265 BET1LQ9NYM9 111 aa8.72□□□□□ -1.01
CDCA3-201ENST00000229265 FOXA2Q9Y261 457 aaPredicted RBP8.72□□□□□ -1.01
CDCA3-201ENST00000229265 FBXO7Q9Y3I1 522 aa8.72□□□□□ -1.01
CDCA3-201ENST00000229265 SONP18583 2426 aaKnown RBP8.71□□□□□ -1.01
CDCA3-201ENST00000229265 A0A096LNT2 108 aa8.71□□□□□ -1.02
CDCA3-201ENST00000229265 SAA2-SAA4A0A096LPE2 208 aa8.71□□□□□ -1.02
CDCA3-201ENST00000229265 PMS2P5A8MQ11 134 aa8.71□□□□□ -1.02
CDCA3-201ENST00000229265 J3QR06 171 aa8.71□□□□□ -1.02
CDCA3-201ENST00000229265 IGHV2-70P01814 119 aa8.71□□□□□ -1.02
CDCA3-201ENST00000229265 IGHV4-39P01824 125 aa8.71□□□□□ -1.02
CDCA3-201ENST00000229265 TFF1P04155 84 aa8.71□□□□□ -1.02
CDCA3-201ENST00000229265 SAA2P0DJI9 122 aaPredicted RBP8.71□□□□□ -1.02
CDCA3-201ENST00000229265 DLX6P56179 175 aa8.71□□□□□ -1.02
CDCA3-201ENST00000229265 RAB11AP62491 216 aa8.71□□□□□ -1.02
CDCA3-201ENST00000229265 TMEM177Q53S58 311 aa8.71□□□□□ -1.02
CDCA3-201ENST00000229265 SPANXN5Q5MJ07 72 aa8.71□□□□□ -1.02
CDCA3-201ENST00000229265 C11orf71Q6IPW1 123 aa8.71□□□□□ -1.02
CDCA3-201ENST00000229265 SLC25A24Q6NUK1 477 aa8.71□□□□□ -1.02
CDCA3-201ENST00000229265 BTNL3Q6UXE8 466 aa8.71□□□□□ -1.02
CDCA3-201ENST00000229265 PDPNQ86YL7 162 aa8.71□□□□□ -1.02
CDCA3-201ENST00000229265 LYG1Q8N1E2 194 aa8.71□□□□□ -1.02
CDCA3-201ENST00000229265 ZNF525Q8N782 197 aa8.71□□□□□ -1.02
CDCA3-201ENST00000229265 BSCL2Q96G97 398 aaPredicted RBP8.71□□□□□ -1.02
CDCA3-201ENST00000229265 RHOVQ96L33 236 aa8.71□□□□□ -1.02
CDCA3-201ENST00000229265 CCL19Q99731 98 aa8.71□□□□□ -1.02
CDCA3-201ENST00000229265 WDR61Q9GZS3 305 aaKnown RBP8.71□□□□□ -1.02
CDCA3-201ENST00000229265 PLA2G2EQ9NZK7 142 aa8.71□□□□□ -1.02
CDCA3-201ENST00000229265 HEATR1Q9H583 2144 aaKnown RBP8.71□□□□□ -1.02
CDCA3-201ENST00000229265 CEBPZOSA8MTT3 80 aa8.7□□□□□ -1.02
CDCA3-201ENST00000229265 C17orf112F2Z3M2 114 aa8.7□□□□□ -1.02
CDCA3-201ENST00000229265 RBMXL2O75526 392 aaKnown RBP8.7□□□□□ -1.02
CDCA3-201ENST00000229265 CRYZL1O95825 349 aa8.7□□□□□ -1.02
CDCA3-201ENST00000229265 IFNA17P01571 189 aa8.7□□□□□ -1.02
CDCA3-201ENST00000229265 APOA2P02652 100 aa8.7□□□□□ -1.02
CDCA3-201ENST00000229265 H2AFB1P0C5Y9 115 aa8.7□□□□□ -1.02
CDCA3-201ENST00000229265 CT45A6P0DMU7 189 aa8.7□□□□□ -1.02
CDCA3-201ENST00000229265 CT45A5P0DMU8 189 aa8.7□□□□□ -1.02
CDCA3-201ENST00000229265 CT45A7P0DMV0 189 aa8.7□□□□□ -1.02
CDCA3-201ENST00000229265 MDKP21741 143 aaPredicted RBP8.7□□□□□ -1.02
CDCA3-201ENST00000229265 NFYBP25208 207 aa8.7□□□□□ -1.02
CDCA3-201ENST00000229265 RAB13P51153 203 aa8.7□□□□□ -1.02
CDCA3-201ENST00000229265 HOXA4Q00056 320 aaPredicted RBP8.7□□□□□ -1.02
CDCA3-201ENST00000229265 CLINT1Q14677 625 aa8.7□□□□□ -1.02
CDCA3-201ENST00000229265 LTC4SQ16873 150 aa8.7□□□□□ -1.02
CDCA3-201ENST00000229265 TMEM249Q2WGJ8 235 aa8.7□□□□□ -1.02
CDCA3-201ENST00000229265 PRAMEF5Q5TYX0 476 aa8.7□□□□□ -1.02
CDCA3-201ENST00000229265 ZNF841Q6ZN19 808 aa8.7□□□□□ -1.02
CDCA3-201ENST00000229265 ZCCHC24Q8N2G6 241 aaKnown RBP8.7□□□□□ -1.02
CDCA3-201ENST00000229265 LILRB2Q8N423 598 aa8.7□□□□□ -1.02
CDCA3-201ENST00000229265 HSD17B11Q8NBQ5 300 aa8.7□□□□□ -1.02
CDCA3-201ENST00000229265 LY6G5BQ8NDX9 201 aa8.7□□□□□ -1.02
CDCA3-201ENST00000229265 BEND2Q8NDZ0 799 aa8.7□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms