RNA–Protein interactions for RNA: ENST00000224807.9

SFXN3-201, Transcript of sideroflexin 3, humanhuman

TSL 5 BASIC

Gene SFXN3, Length 3,089 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN3-201ENST00000224807 SCCPDHQ8NBX0 429 aa11.99□□□□□ -0.49
SFXN3-201ENST00000224807 MS4A5Q9H3V2 200 aa11.99□□□□□ -0.49
SFXN3-201ENST00000224807 DMXL2Q8TDJ6 3036 aa11.99□□□□□ -0.49
SFXN3-201ENST00000224807 LYSMD4Q5XG99 296 aa11.98□□□□□ -0.49
SFXN3-201ENST00000224807 C5orf30Q96GV9 206 aa11.98□□□□□ -0.49
SFXN3-201ENST00000224807 SSBP4Q9BWG4 385 aaPredicted RBP11.98□□□□□ -0.49
SFXN3-201ENST00000224807 PCNX1Q96RV3 2341 aa11.98□□□□□ -0.49
SFXN3-201ENST00000224807 MED13Q9UHV7 2174 aa11.98□□□□□ -0.49
SFXN3-201ENST00000224807 TOX3O15405 576 aaPredicted RBP11.98□□□□□ -0.49
SFXN3-201ENST00000224807 PLXNB1O43157 2135 aa11.98□□□□□ -0.49
SFXN3-201ENST00000224807 NEURL1O76050 574 aa11.98□□□□□ -0.49
SFXN3-201ENST00000224807 IL6RP08887 468 aaPredicted RBP11.98□□□□□ -0.49
SFXN3-201ENST00000224807 OR9G9P0C7N8 305 aa11.98□□□□□ -0.49
SFXN3-201ENST00000224807 PLGLB1Q02325 96 aa11.98□□□□□ -0.49
SFXN3-201ENST00000224807 PSG5Q15238 335 aa11.98□□□□□ -0.49
SFXN3-201ENST00000224807 ZNF439Q8NDP4 499 aa11.98□□□□□ -0.49
SFXN3-201ENST00000224807 OR4A16Q8NH70 328 aa11.98□□□□□ -0.49
SFXN3-201ENST00000224807 TECTBQ96PL2 329 aa11.98□□□□□ -0.49
SFXN3-201ENST00000224807 TECRQ9NZ01 308 aaKnown RBP11.98□□□□□ -0.49
SFXN3-201ENST00000224807 METRNQ9UJH8 293 aa11.98□□□□□ -0.49
SFXN3-201ENST00000224807 A8MXE2 369 aa11.97□□□□□ -0.49
SFXN3-201ENST00000224807 PATE3B3GLJ2 98 aa11.97□□□□□ -0.49
SFXN3-201ENST00000224807 CATR1Q13166 79 aa11.97□□□□□ -0.49
SFXN3-201ENST00000224807 RNASEKQ6P5S7 137 aaKnown RBP11.97□□□□□ -0.49
SFXN3-201ENST00000224807 BORCS7Q96B45 105 aa11.97□□□□□ -0.49
SFXN3-201ENST00000224807 VPS25Q9BRG1 176 aa11.97□□□□□ -0.49
SFXN3-201ENST00000224807 PLEKHA3Q9HB20 300 aa11.97□□□□□ -0.49
SFXN3-201ENST00000224807 LAMTOR2Q9Y2Q5 125 aa11.97□□□□□ -0.49
SFXN3-201ENST00000224807 ATMQ13315 3056 aa11.97□□□□□ -0.49
SFXN3-201ENST00000224807 SNAI2O43623 268 aa11.97□□□□□ -0.49
SFXN3-201ENST00000224807 PDE6DO43924 150 aa11.97□□□□□ -0.49
SFXN3-201ENST00000224807 FOLR3P41439 243 aa11.97□□□□□ -0.49
SFXN3-201ENST00000224807 MAGEA5P43359 124 aa11.97□□□□□ -0.49
SFXN3-201ENST00000224807 RANP62826 216 aaKnown RBP11.97□□□□□ -0.49
SFXN3-201ENST00000224807 OR4C5Q8NGB2 326 aa11.97□□□□□ -0.49
SFXN3-201ENST00000224807 LINC00479Q96M42 142 aa11.97□□□□□ -0.49
SFXN3-201ENST00000224807 HSD17B10Q99714 261 aaKnown RBP11.97□□□□□ -0.49
SFXN3-201ENST00000224807 PHF7Q9BWX1 381 aaPredicted RBP11.97□□□□□ -0.49
SFXN3-201ENST00000224807 ASCL3Q9NQ33 180 aa11.97□□□□□ -0.49
SFXN3-201ENST00000224807 SMG1Q96Q15 3661 aaKnown RBP11.97□□□□□ -0.49
SFXN3-201ENST00000224807 M0R1X1 148 aa11.97□□□□□ -0.49
SFXN3-201ENST00000224807 VENTXO95231 258 aa11.97□□□□□ -0.49
SFXN3-201ENST00000224807 FABP6P51161 128 aa11.97□□□□□ -0.49
SFXN3-201ENST00000224807 B3GALT5-AS1P59052 145 aa11.97□□□□□ -0.49
SFXN3-201ENST00000224807 SF3B5Q9BWJ5 86 aaKnown RBP11.97□□□□□ -0.49
SFXN3-201ENST00000224807 PRDM14Q9GZV8 571 aa11.97□□□□□ -0.49
SFXN3-201ENST00000224807 HSPB7Q9UBY9 170 aa11.97□□□□□ -0.49
SFXN3-201ENST00000224807 ZNF391Q9UJN7 358 aa11.97□□□□□ -0.49
SFXN3-201ENST00000224807 SH2D7A6NKC9 451 aaPredicted RBP11.96□□□□□ -0.49
SFXN3-201ENST00000224807 SRD5A2P31213 254 aa11.96□□□□□ -0.49
SFXN3-201ENST00000224807 GFRA1P56159 465 aa11.96□□□□□ -0.49
SFXN3-201ENST00000224807 RPEL1Q2QD12 228 aa11.96□□□□□ -0.49
SFXN3-201ENST00000224807 RPL39P5Q59GN2 51 aa11.96□□□□□ -0.49
SFXN3-201ENST00000224807 WDR86Q86TI4 376 aa11.96□□□□□ -0.49
SFXN3-201ENST00000224807 SMRP1Q8NCR6 262 aa11.96□□□□□ -0.49
SFXN3-201ENST00000224807 STRADBQ9C0K7 418 aa11.96□□□□□ -0.49
SFXN3-201ENST00000224807 HYPMO75409 117 aa11.96□□□□□ -0.5
SFXN3-201ENST00000224807 TYMSP04818 313 aa11.96□□□□□ -0.5
SFXN3-201ENST00000224807 KRTAP27-1Q3LI81 207 aa11.96□□□□□ -0.5
SFXN3-201ENST00000224807 CENPWQ5EE01 88 aa11.96□□□□□ -0.5
SFXN3-201ENST00000224807 PMCHL2Q9BQD1 86 aa11.96□□□□□ -0.5
SFXN3-201ENST00000224807 C15orf62A8K5M9 175 aa11.95□□□□□ -0.5
SFXN3-201ENST00000224807 MLNRO43193 412 aa11.95□□□□□ -0.5
SFXN3-201ENST00000224807 KLF7O75840 302 aaPredicted RBP11.95□□□□□ -0.5
SFXN3-201ENST00000224807 LYZL6O75951 148 aa11.95□□□□□ -0.5
SFXN3-201ENST00000224807 C3orf79P0CE67 100 aa11.95□□□□□ -0.5
SFXN3-201ENST00000224807 CYB561P49447 251 aa11.95□□□□□ -0.5
SFXN3-201ENST00000224807 GNG4P50150 75 aa11.95□□□□□ -0.5
SFXN3-201ENST00000224807 DUSP3P51452 185 aaPredicted RBP11.95□□□□□ -0.5
SFXN3-201ENST00000224807 MRPL14Q6P1L8 145 aaKnown RBP11.95□□□□□ -0.5
SFXN3-201ENST00000224807 Q6ZS49 121 aa11.95□□□□□ -0.5
SFXN3-201ENST00000224807 TMEM144Q7Z5S9 345 aa11.95□□□□□ -0.5
SFXN3-201ENST00000224807 AGBL5Q8NDL9 886 aa11.95□□□□□ -0.5
SFXN3-201ENST00000224807 ZFP30Q9Y2G7 519 aa11.95□□□□□ -0.5
SFXN3-201ENST00000224807 CACNA1BQ00975 2339 aa11.95□□□□□ -0.5
SFXN3-201ENST00000224807 PLCE1Q9P212 2302 aa11.95□□□□□ -0.5
SFXN3-201ENST00000224807 A0A1W2PN81 502 aa11.95□□□□□ -0.5
SFXN3-201ENST00000224807 DPRXA6NFQ7 191 aa11.95□□□□□ -0.5
SFXN3-201ENST00000224807 HAND1O96004 215 aa11.95□□□□□ -0.5
SFXN3-201ENST00000224807 TEX43Q6ZNM6 134 aa11.95□□□□□ -0.5
SFXN3-201ENST00000224807 MIR17HGQ75NE6 70 aa11.95□□□□□ -0.5
SFXN3-201ENST00000224807 MDP1Q86V88 176 aa11.95□□□□□ -0.5
SFXN3-201ENST00000224807 SLC24A4Q8NFF2 622 aa11.95□□□□□ -0.5
SFXN3-201ENST00000224807 IMMP1LQ96LU5 166 aa11.95□□□□□ -0.5
SFXN3-201ENST00000224807 DEFB127Q9H1M4 99 aa11.95□□□□□ -0.5
SFXN3-201ENST00000224807 ARL2-SNX15V9GYD0 113 aa11.95□□□□□ -0.5
SFXN3-201ENST00000224807 RNF212BA8MTL3 300 aa11.95□□□□□ -0.5
SFXN3-201ENST00000224807 AHRRA9YTQ3 701 aa11.95□□□□□ -0.5
SFXN3-201ENST00000224807 HSBP1O75506 76 aa11.95□□□□□ -0.5
SFXN3-201ENST00000224807 TOX4O94842 621 aa11.95□□□□□ -0.5
SFXN3-201ENST00000224807 NDUFB8O95169 186 aa11.95□□□□□ -0.5
SFXN3-201ENST00000224807 PLAUP00749 431 aa11.95□□□□□ -0.5
SFXN3-201ENST00000224807 ARG2P78540 354 aa11.95□□□□□ -0.5
SFXN3-201ENST00000224807 MLANAQ16655 118 aa11.95□□□□□ -0.5
SFXN3-201ENST00000224807 CLEC5AQ9NY25 188 aa11.95□□□□□ -0.5
SFXN3-201ENST00000224807 GPX1P07203 203 aa11.94□□□□□ -0.5
SFXN3-201ENST00000224807 FOXA3P55318 350 aaPredicted RBP11.94□□□□□ -0.5
SFXN3-201ENST00000224807 PAFAH1B2P68402 229 aa11.94□□□□□ -0.5
SFXN3-201ENST00000224807 Q6P435 159 aa11.94□□□□□ -0.5
SFXN3-201ENST00000224807 VHLLQ6RSH7 139 aa11.94□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms