RNA–Protein interactions for RNA: ENST00000216211.8

UPK3A-201, Transcript of uroplakin 3A, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene UPK3A, Length 1,051 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3A-201ENST00000216211 PPP1R27Q86WC6 154 aa11.58□□□□□ -0.56
UPK3A-201ENST00000216211 TCTEX1D1Q8N7M0 179 aa11.58□□□□□ -0.56
UPK3A-201ENST00000216211 MS4A10Q96PG2 267 aa11.58□□□□□ -0.56
UPK3A-201ENST00000216211 GHITMQ9H3K2 345 aa11.58□□□□□ -0.56
UPK3A-201ENST00000216211 IFT46Q9NQC8 304 aa11.58□□□□□ -0.56
UPK3A-201ENST00000216211 MCUBQ9NWR8 336 aa11.58□□□□□ -0.56
UPK3A-201ENST00000216211 MGAT4AQ9UM21 535 aa11.58□□□□□ -0.56
UPK3A-201ENST00000216211 CA2P00918 260 aa11.57□□□□□ -0.56
UPK3A-201ENST00000216211 IGKV1-16P04430 117 aa11.57□□□□□ -0.56
UPK3A-201ENST00000216211 ARFRP1Q13795 201 aa11.57□□□□□ -0.56
UPK3A-201ENST00000216211 ACTBL2Q562R1 376 aa11.57□□□□□ -0.56
UPK3A-201ENST00000216211 FAAP20Q6NZ36 180 aa11.57□□□□□ -0.56
UPK3A-201ENST00000216211 AKAP14Q86UN6 197 aa11.57□□□□□ -0.56
UPK3A-201ENST00000216211 LFNGQ8NES3 379 aa11.57□□□□□ -0.56
UPK3A-201ENST00000216211 OR4D10Q8NGI6 311 aa11.57□□□□□ -0.56
UPK3A-201ENST00000216211 ARPC1AQ92747 370 aa11.57□□□□□ -0.56
UPK3A-201ENST00000216211 RNF5Q99942 180 aa11.57□□□□□ -0.56
UPK3A-201ENST00000216211 CMSS1Q9BQ75 279 aaKnown RBP11.57□□□□□ -0.56
UPK3A-201ENST00000216211 C20orf85Q9H1P6 137 aa11.57□□□□□ -0.56
UPK3A-201ENST00000216211 C12orf4Q9NQ89 552 aa11.57□□□□□ -0.56
UPK3A-201ENST00000216211 STAB2Q8WWQ8 2551 aa11.56□□□□□ -0.56
UPK3A-201ENST00000216211 IGKV1-6A0A0C4DH72 117 aa11.56□□□□□ -0.56
UPK3A-201ENST00000216211 DISC1C4P0D8 188 aa11.56□□□□□ -0.56
UPK3A-201ENST00000216211 PRAF2O60831 178 aa11.56□□□□□ -0.56
UPK3A-201ENST00000216211 TPPP2P59282 170 aa11.56□□□□□ -0.56
UPK3A-201ENST00000216211 RPS16P62249 146 aaKnown RBP11.56□□□□□ -0.56
UPK3A-201ENST00000216211 RBMS2Q15434 407 aaKnown RBP11.56□□□□□ -0.56
UPK3A-201ENST00000216211 AKIRIN2Q53H80 203 aa11.56□□□□□ -0.56
UPK3A-201ENST00000216211 ACSM6Q6P461 480 aa11.56□□□□□ -0.56
UPK3A-201ENST00000216211 ZNF562Q6V9R5 426 aa11.56□□□□□ -0.56
UPK3A-201ENST00000216211 HOGA1Q86XE5 327 aa11.56□□□□□ -0.56
UPK3A-201ENST00000216211 GVQW1Q8N7I0 195 aa11.56□□□□□ -0.56
UPK3A-201ENST00000216211 ZNF383Q8NA42 475 aa11.56□□□□□ -0.56
UPK3A-201ENST00000216211 OR51S1Q8NGJ8 323 aa11.56□□□□□ -0.56
UPK3A-201ENST00000216211 TINAGL1Q9GZM7 467 aaPredicted RBP11.56□□□□□ -0.56
UPK3A-201ENST00000216211 SLC2A8Q9NY64 477 aa11.56□□□□□ -0.56
UPK3A-201ENST00000216211 ZNF221Q9UK13 617 aa11.56□□□□□ -0.56
UPK3A-201ENST00000216211 DYNC2H1Q8NCM8 4307 aaKnown RBP11.55□□□□□ -0.56
UPK3A-201ENST00000216211 M0QYG6 137 aa11.55□□□□□ -0.56
UPK3A-201ENST00000216211 HSPB1P04792 205 aaKnown RBP11.55□□□□□ -0.56
UPK3A-201ENST00000216211 IL5P05113 134 aa11.55□□□□□ -0.56
UPK3A-201ENST00000216211 GP9P14770 177 aa11.55□□□□□ -0.56
UPK3A-201ENST00000216211 RNASE10Q5GAN6 216 aaKnown RBP11.55□□□□□ -0.56
UPK3A-201ENST00000216211 OVCH2Q7RTZ1 564 aa11.55□□□□□ -0.56
UPK3A-201ENST00000216211 SBSPONQ8IVN8 264 aa11.55□□□□□ -0.56
UPK3A-201ENST00000216211 SNAPC3Q92966 411 aa11.55□□□□□ -0.56
UPK3A-201ENST00000216211 RHOVQ96L33 236 aa11.55□□□□□ -0.56
UPK3A-201ENST00000216211 TSNAXQ99598 290 aaKnown RBP11.55□□□□□ -0.56
UPK3A-201ENST00000216211 SLC25A21Q9BQT8 299 aaPredicted RBP11.55□□□□□ -0.56
UPK3A-201ENST00000216211 RDH8Q9NYR8 311 aa11.55□□□□□ -0.56
UPK3A-201ENST00000216211 SCP2D1Q9UJQ7 156 aa11.55□□□□□ -0.56
UPK3A-201ENST00000216211 LYSTQ99698 3801 aa11.54□□□□□ -0.56
UPK3A-201ENST00000216211 TRDCB7Z8K6 153 aa11.54□□□□□ -0.56
UPK3A-201ENST00000216211 M0R1X1 148 aa11.54□□□□□ -0.56
UPK3A-201ENST00000216211 ARPC1BO15143 372 aaKnown RBP11.54□□□□□ -0.56
UPK3A-201ENST00000216211 SLC25A17O43808 307 aa11.54□□□□□ -0.56
UPK3A-201ENST00000216211 CCNKO75909 580 aa11.54□□□□□ -0.56
UPK3A-201ENST00000216211 SPDEFO95238 335 aa11.54□□□□□ -0.56
UPK3A-201ENST00000216211 APOA2P02652 100 aa11.54□□□□□ -0.56
UPK3A-201ENST00000216211 FCER2P06734 321 aa11.54□□□□□ -0.56
UPK3A-201ENST00000216211 OR8U9P0C7N5 309 aa11.54□□□□□ -0.56
UPK3A-201ENST00000216211 DTYMKP23919 212 aa11.54□□□□□ -0.56
UPK3A-201ENST00000216211 RRAS2P62070 204 aaPredicted RBP11.54□□□□□ -0.56
UPK3A-201ENST00000216211 CD300CQ08708 224 aa11.54□□□□□ -0.56
UPK3A-201ENST00000216211 PDPNQ86YL7 162 aa11.54□□□□□ -0.56
UPK3A-201ENST00000216211 OR6F1Q8NGZ6 308 aa11.54□□□□□ -0.56
UPK3A-201ENST00000216211 GRPEL2Q8TAA5 225 aa11.54□□□□□ -0.56
UPK3A-201ENST00000216211 FLYWCH2Q96CP2 140 aaKnown RBP11.54□□□□□ -0.56
UPK3A-201ENST00000216211 PRRT1Q99946 306 aa11.54□□□□□ -0.56
UPK3A-201ENST00000216211 GINS4Q9BRT9 223 aa11.54□□□□□ -0.56
UPK3A-201ENST00000216211 ZNF355PQ9NSJ1 428 aa11.54□□□□□ -0.56
UPK3A-201ENST00000216211 FLVCR2Q9UPI3 526 aa11.54□□□□□ -0.56
UPK3A-201ENST00000216211 BOLA2-SMG1P6H3BVE0 249 aa11.53□□□□□ -0.56
UPK3A-201ENST00000216211 TRGV3P03979 118 aa11.53□□□□□ -0.56
UPK3A-201ENST00000216211 FRMD6-AS1P0C7T7 363 aa11.53□□□□□ -0.56
UPK3A-201ENST00000216211 FXYD3Q14802 87 aa11.53□□□□□ -0.56
UPK3A-201ENST00000216211 HAPLN4Q86UW8 402 aa11.53□□□□□ -0.56
UPK3A-201ENST00000216211 GIMAP1Q8WWP7 306 aa11.53□□□□□ -0.56
UPK3A-201ENST00000216211 ST6GAL2Q96JF0 529 aa11.53□□□□□ -0.56
UPK3A-201ENST00000216211 OR2D2Q9H210 308 aa11.53□□□□□ -0.56
UPK3A-201ENST00000216211 SLA2Q9H6Q3 261 aa11.53□□□□□ -0.56
UPK3A-201ENST00000216211 SLC35D1Q9NTN3 355 aa11.53□□□□□ -0.56
UPK3A-201ENST00000216211 RYR2Q92736 4967 aa11.53□□□□□ -0.56
UPK3A-201ENST00000216211 C3orf84H3BNL1 204 aa11.52□□□□□ -0.57
UPK3A-201ENST00000216211 BET1O15155 118 aa11.52□□□□□ -0.57
UPK3A-201ENST00000216211 HRH1P35367 487 aa11.52□□□□□ -0.57
UPK3A-201ENST00000216211 TAS2R46P59540 309 aa11.52□□□□□ -0.57
UPK3A-201ENST00000216211 PJVKQ0ZLH3 352 aa11.52□□□□□ -0.57
UPK3A-201ENST00000216211 SRSF7Q16629 238 aaKnown RBP eCLIP11.52□□□□□ -0.57
UPK3A-201ENST00000216211 IDO2Q6ZQW0 420 aa11.52□□□□□ -0.57
UPK3A-201ENST00000216211 ARRDC1Q8N5I2 433 aa11.52□□□□□ -0.57
UPK3A-201ENST00000216211 ZNF436-AS1Q8NC38 126 aaPredicted RBP11.52□□□□□ -0.57
UPK3A-201ENST00000216211 BEST4Q8NFU0 473 aa11.52□□□□□ -0.57
UPK3A-201ENST00000216211 OR5T1Q8NG75 326 aa11.52□□□□□ -0.57
UPK3A-201ENST00000216211 OR4A4PQ8NGN8 299 aa11.52□□□□□ -0.57
UPK3A-201ENST00000216211 RCHY1Q96PM5 261 aa11.52□□□□□ -0.57
UPK3A-201ENST00000216211 OR4C12Q96R67 309 aa11.52□□□□□ -0.57
UPK3A-201ENST00000216211 ST6GALNAC5Q9BVH7 336 aa11.52□□□□□ -0.57
UPK3A-201ENST00000216211 CSMD3Q7Z407 3707 aa11.51□□□□□ -0.57
UPK3A-201ENST00000216211 SNRPGP15A8MWD9 76 aa11.51□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms