RNA–Protein interactions for RNA: ENST00000215793.12

SF3A1-201, Transcript of splicing factor 3a subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SF3A1, Length 5,143 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-201ENST00000215793 C1orf162Q8NEQ5 155 aaPredicted RBP11.53□□□□□ -0.56
SF3A1-201ENST00000215793 OR10S1Q8NGN2 331 aa11.53□□□□□ -0.56
SF3A1-201ENST00000215793 DOCK5Q9H7D0 1870 aa11.53□□□□□ -0.56
SF3A1-201ENST00000215793 LOC107984156A0A0G2JMH3 177 aa11.53□□□□□ -0.56
SF3A1-201ENST00000215793 NAT1P18440 290 aa11.53□□□□□ -0.56
SF3A1-201ENST00000215793 Q5BKY6 102 aa11.53□□□□□ -0.56
SF3A1-201ENST00000215793 ARL17AQ8IVW1 177 aa11.53□□□□□ -0.56
SF3A1-201ENST00000215793 VKORC1L1Q8N0U8 176 aa11.53□□□□□ -0.56
SF3A1-201ENST00000215793 ZNF436-AS1Q8NC38 126 aaPredicted RBP11.53□□□□□ -0.56
SF3A1-201ENST00000215793 ZNRF1Q8ND25 227 aa11.53□□□□□ -0.56
SF3A1-201ENST00000215793 SFRP2Q96HF1 295 aa11.53□□□□□ -0.56
SF3A1-201ENST00000215793 RTN4RQ9BZR6 473 aa11.53□□□□□ -0.56
SF3A1-201ENST00000215793 FDCSPQ8NFU4 85 aa11.53□□□□□ -0.56
SF3A1-201ENST00000215793 RPRMQ9NS64 109 aa11.53□□□□□ -0.56
SF3A1-201ENST00000215793 RAXQ9Y2V3 346 aa11.53□□□□□ -0.56
SF3A1-201ENST00000215793 CACNA1EQ15878 2313 aa11.53□□□□□ -0.56
SF3A1-201ENST00000215793 PLXNB2O15031 1838 aa11.53□□□□□ -0.56
SF3A1-201ENST00000215793 A0A0B4J293 547 aa11.52□□□□□ -0.56
SF3A1-201ENST00000215793 TM4SF5O14894 197 aa11.52□□□□□ -0.56
SF3A1-201ENST00000215793 IL4P05112 153 aa11.52□□□□□ -0.56
SF3A1-201ENST00000215793 REG1AP05451 166 aa11.52□□□□□ -0.56
SF3A1-201ENST00000215793 IFITM2Q01629 132 aa11.52□□□□□ -0.56
SF3A1-201ENST00000215793 ZNF506Q5JVG8 444 aa11.52□□□□□ -0.56
SF3A1-201ENST00000215793 GOLT1AQ6ZVE7 132 aa11.52□□□□□ -0.56
SF3A1-201ENST00000215793 CNOT1A5YKK6 2376 aaKnown RBP11.52□□□□□ -0.56
SF3A1-201ENST00000215793 TCF21O43680 179 aa11.52□□□□□ -0.57
SF3A1-201ENST00000215793 UCP1P25874 307 aa11.52□□□□□ -0.57
SF3A1-201ENST00000215793 GPX4P36969 197 aaPredicted RBP11.52□□□□□ -0.57
SF3A1-201ENST00000215793 CIRBPQ14011 172 aaKnown RBP11.52□□□□□ -0.57
SF3A1-201ENST00000215793 KIR2DL4Q99706 377 aa11.52□□□□□ -0.57
SF3A1-201ENST00000215793 PLSCR2Q9NRY7 297 aa11.52□□□□□ -0.57
SF3A1-201ENST00000215793 COL4A5P29400 1685 aa11.52□□□□□ -0.57
SF3A1-201ENST00000215793 C12orf77C9JDV5 145 aa11.52□□□□□ -0.57
SF3A1-201ENST00000215793 PRSS2P07478 247 aa11.52□□□□□ -0.57
SF3A1-201ENST00000215793 RFPL3SP0C7P2 107 aa11.52□□□□□ -0.57
SF3A1-201ENST00000215793 TCTAP57738 103 aa11.52□□□□□ -0.57
SF3A1-201ENST00000215793 SNRPD3P62318 126 aaKnown RBP11.52□□□□□ -0.57
SF3A1-201ENST00000215793 SMUG1Q53HV7 270 aa11.52□□□□□ -0.57
SF3A1-201ENST00000215793 ACP7Q6ZNF0 438 aa11.52□□□□□ -0.57
SF3A1-201ENST00000215793 GPR82Q96P67 336 aa11.52□□□□□ -0.57
SF3A1-201ENST00000215793 FOXJ2Q9P0K8 574 aa11.52□□□□□ -0.57
SF3A1-201ENST00000215793 MPTX1A8MV57 137 aa11.52□□□□□ -0.57
SF3A1-201ENST00000215793 ATXN7O15265 892 aaPredicted RBP11.52□□□□□ -0.57
SF3A1-201ENST00000215793 SIGLEC5O15389 551 aa11.52□□□□□ -0.57
SF3A1-201ENST00000215793 HINT1P49773 126 aaPredicted RBP11.52□□□□□ -0.57
SF3A1-201ENST00000215793 KLRB1Q12918 225 aa11.52□□□□□ -0.57
SF3A1-201ENST00000215793 CLDND2Q8NHS1 167 aa11.52□□□□□ -0.57
SF3A1-201ENST00000215793 NEU1Q99519 415 aa11.52□□□□□ -0.57
SF3A1-201ENST00000215793 MOB4Q9Y3A3 225 aa11.52□□□□□ -0.57
SF3A1-201ENST00000215793 ESPL1Q14674 2120 aa11.51□□□□□ -0.57
SF3A1-201ENST00000215793 IGKV3D-15A0A087WSY6 115 aa11.51□□□□□ -0.57
SF3A1-201ENST00000215793 RAMP1O60894 148 aa11.51□□□□□ -0.57
SF3A1-201ENST00000215793 IGKV3-15P01624 115 aa11.51□□□□□ -0.57
SF3A1-201ENST00000215793 FHITP49789 147 aa11.51□□□□□ -0.57
SF3A1-201ENST00000215793 MBNL2Q5VZF2 373 aaKnown RBP11.51□□□□□ -0.57
SF3A1-201ENST00000215793 TDRD15B5MCY1 1934 aaKnown RBP11.51□□□□□ -0.57
SF3A1-201ENST00000215793 KIF13BQ9NQT8 1826 aa11.51□□□□□ -0.57
SF3A1-201ENST00000215793 C1QTNF12Q5T7M4 302 aa11.51□□□□□ -0.57
SF3A1-201ENST00000215793 RCC1LQ96I51 464 aaKnown RBP11.51□□□□□ -0.57
SF3A1-201ENST00000215793 HIST1H4GQ99525 98 aa11.51□□□□□ -0.57
SF3A1-201ENST00000215793 TMEM106BQ9NUM4 274 aa11.51□□□□□ -0.57
SF3A1-201ENST00000215793 IGHV3OR16-12A0A075B7B8 117 aa11.51□□□□□ -0.57
SF3A1-201ENST00000215793 CYP2G1PQ6ZSU1 146 aa11.51□□□□□ -0.57
SF3A1-201ENST00000215793 POLR2AP24928 1970 aaKnown RBP11.51□□□□□ -0.57
SF3A1-201ENST00000215793 SHISA3A0PJX4 238 aa11.51□□□□□ -0.57
SF3A1-201ENST00000215793 RRHO14718 337 aa11.51□□□□□ -0.57
SF3A1-201ENST00000215793 CECR9P0C854 216 aa11.51□□□□□ -0.57
SF3A1-201ENST00000215793 LGALS3P17931 250 aaKnown RBP11.51□□□□□ -0.57
SF3A1-201ENST00000215793 PRSS8Q16651 343 aa11.51□□□□□ -0.57
SF3A1-201ENST00000215793 CENPWQ5EE01 88 aa11.51□□□□□ -0.57
SF3A1-201ENST00000215793 C1QL2Q7Z5L3 287 aa11.51□□□□□ -0.57
SF3A1-201ENST00000215793 DPM3Q9P2X0 92 aa11.51□□□□□ -0.57
SF3A1-201ENST00000215793 IGLV3-19P01714 112 aa11.5□□□□□ -0.57
SF3A1-201ENST00000215793 INTS1Q8N201 2190 aaKnown RBP11.5□□□□□ -0.57
SF3A1-201ENST00000215793 LNP1A1A4G5 178 aa11.5□□□□□ -0.57
SF3A1-201ENST00000215793 IL6RP08887 468 aaPredicted RBP11.5□□□□□ -0.57
SF3A1-201ENST00000215793 DDTP30046 118 aa11.5□□□□□ -0.57
SF3A1-201ENST00000215793 UQCRFS1P47985 274 aa11.5□□□□□ -0.57
SF3A1-201ENST00000215793 DLX6P56179 175 aa11.5□□□□□ -0.57
SF3A1-201ENST00000215793 HBBP68871 147 aa11.5□□□□□ -0.57
SF3A1-201ENST00000215793 KIAA1644Q3SXP7 199 aa11.5□□□□□ -0.57
SF3A1-201ENST00000215793 LINC00305Q7Z4B0 112 aa11.5□□□□□ -0.57
SF3A1-201ENST00000215793 IFI27L2Q9H2X8 130 aa11.5□□□□□ -0.57
SF3A1-201ENST00000215793 LY6EQ16553 131 aa11.5□□□□□ -0.57
SF3A1-201ENST00000215793 FAM159AQ6UWV7 190 aa11.5□□□□□ -0.57
SF3A1-201ENST00000215793 C1QTNF5Q9BXJ0 243 aa11.5□□□□□ -0.57
SF3A1-201ENST00000215793 NPCDR1Q9BY65 106 aa11.5□□□□□ -0.57
SF3A1-201ENST00000215793 LOC102724200A0A096LPH7 203 aaPredicted RBP11.5□□□□□ -0.57
SF3A1-201ENST00000215793 LCN2P80188 198 aa11.5□□□□□ -0.57
SF3A1-201ENST00000215793 RPL39P5Q59GN2 51 aa11.5□□□□□ -0.57
SF3A1-201ENST00000215793 SIGLEC12Q96PQ1 595 aa11.5□□□□□ -0.57
SF3A1-201ENST00000215793 ARFGEF1Q9Y6D6 1849 aa11.49□□□□□ -0.57
SF3A1-201ENST00000215793 H3BTX0 84 aa11.49□□□□□ -0.57
SF3A1-201ENST00000215793 CSRP2Q16527 193 aa11.49□□□□□ -0.57
SF3A1-201ENST00000215793 REPIN1Q9BWE0 567 aaKnown RBP11.49□□□□□ -0.57
SF3A1-201ENST00000215793 GFRA3O60609 400 aa11.49□□□□□ -0.57
SF3A1-201ENST00000215793 EIF3GO75821 320 aaKnown RBP eCLIP11.49□□□□□ -0.57
SF3A1-201ENST00000215793 NBEAP1P0C6P0 100 aa11.49□□□□□ -0.57
SF3A1-201ENST00000215793 C19orf48Q6RUI8 117 aa11.49□□□□□ -0.57
SF3A1-201ENST00000215793 A0A0G2JK05 382 aa11.49□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms