RNA–Protein interactions for RNA: ENST00000066544.7

CDC27-201, Transcript of cell division cycle 27, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CDC27, Length 5,801 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC27-201ENST00000066544 MBP02144 154 aa6.87□□□□□ -1.31
CDC27-201ENST00000066544 SNRPCP09234 159 aaKnown RBP6.87□□□□□ -1.31
CDC27-201ENST00000066544 ARL14EPLP0DKL9 152 aa6.87□□□□□ -1.31
CDC27-201ENST00000066544 GNB1P62873 340 aa6.87□□□□□ -1.31
CDC27-201ENST00000066544 C1orf229Q6ZS94 237 aaPredicted RBP6.87□□□□□ -1.31
CDC27-201ENST00000066544 TMEM140Q9NV12 185 aa6.87□□□□□ -1.31
CDC27-201ENST00000066544 TRAV17A0A0B4J275 112 aa6.87□□□□□ -1.31
CDC27-201ENST00000066544 C15orf65H3BRN8 121 aa6.87□□□□□ -1.31
CDC27-201ENST00000066544 MORN2Q502X0 79 aa6.87□□□□□ -1.31
CDC27-201ENST00000066544 SPATA31B1PQ5VZV4 182 aa6.87□□□□□ -1.31
CDC27-201ENST00000066544 TGIF2LYQ8IUE0 185 aa6.87□□□□□ -1.31
CDC27-201ENST00000066544 ZCCHC24Q8N2G6 241 aaKnown RBP6.87□□□□□ -1.31
CDC27-201ENST00000066544 CTDSP1Q9GZU7 261 aa6.87□□□□□ -1.31
CDC27-201ENST00000066544 SRD5A3Q9H8P0 318 aa6.87□□□□□ -1.31
CDC27-201ENST00000066544 SH3BGRL2Q9UJC5 107 aa6.87□□□□□ -1.31
CDC27-201ENST00000066544 TIMM9Q9Y5J7 89 aa6.87□□□□□ -1.31
CDC27-201ENST00000066544 TMEM250H0YL14 139 aa6.86□□□□□ -1.31
CDC27-201ENST00000066544 J3QW42 95 aa6.86□□□□□ -1.31
CDC27-201ENST00000066544 MOB3BQ86TA1 216 aa6.86□□□□□ -1.31
CDC27-201ENST00000066544 SPTAN1Q13813 2472 aaKnown RBP6.86□□□□□ -1.31
CDC27-201ENST00000066544 AMBPP02760 352 aa6.86□□□□□ -1.31
CDC27-201ENST00000066544 EIF4EBP1Q13541 118 aaPredicted RBP6.86□□□□□ -1.31
CDC27-201ENST00000066544 ACSF3Q4G176 576 aaPredicted RBP6.86□□□□□ -1.31
CDC27-201ENST00000066544 BHLHA15Q7RTS1 189 aaPredicted RBP6.86□□□□□ -1.31
CDC27-201ENST00000066544 TCF23Q7RTU1 214 aa6.86□□□□□ -1.31
CDC27-201ENST00000066544 HIPK2Q9H2X6 1198 aa6.86□□□□□ -1.31
CDC27-201ENST00000066544 RYDENQ9NUL5 291 aaKnown RBP6.86□□□□□ -1.31
CDC27-201ENST00000066544 PITPNC1Q9UKF7 332 aa6.86□□□□□ -1.31
CDC27-201ENST00000066544 WDR83OSQ9Y284 106 aa6.86□□□□□ -1.31
CDC27-201ENST00000066544 PXMP4Q9Y6I8 212 aa6.86□□□□□ -1.31
CDC27-201ENST00000066544 MUC6Q6W4X9 2439 aa6.86□□□□□ -1.31
CDC27-201ENST00000066544 ZNF729A6NN14 1252 aaPredicted RBP6.86□□□□□ -1.31
CDC27-201ENST00000066544 PRR33A8MZF0 331 aa6.86□□□□□ -1.31
CDC27-201ENST00000066544 HRASP01112 189 aa6.86□□□□□ -1.31
CDC27-201ENST00000066544 HIST1H1BP16401 226 aaKnown RBP6.86□□□□□ -1.31
CDC27-201ENST00000066544 STARD4Q96DR4 205 aa6.86□□□□□ -1.31
CDC27-201ENST00000066544 SPTBN1Q01082 2364 aaKnown RBP6.86□□□□□ -1.31
CDC27-201ENST00000066544 ELOA3CA0A087WX78 387 aaPredicted RBP6.86□□□□□ -1.31
CDC27-201ENST00000066544 SPINK4O60575 86 aa6.86□□□□□ -1.31
CDC27-201ENST00000066544 WNT2P09544 360 aa6.86□□□□□ -1.31
CDC27-201ENST00000066544 CD33P20138 364 aa6.86□□□□□ -1.31
CDC27-201ENST00000066544 GATA2P23769 480 aaPredicted RBP6.86□□□□□ -1.31
CDC27-201ENST00000066544 GNB2P62879 340 aa6.86□□□□□ -1.31
CDC27-201ENST00000066544 PMS2P11Q13670 270 aa6.86□□□□□ -1.31
CDC27-201ENST00000066544 TREML4Q6UXN2 200 aa6.86□□□□□ -1.31
CDC27-201ENST00000066544 RND1Q92730 232 aa6.86□□□□□ -1.31
CDC27-201ENST00000066544 TCF19Q9Y242 345 aa6.86□□□□□ -1.31
CDC27-201ENST00000066544 OR1P1Q8NH06 330 aa6.86□□□□□ -1.31
CDC27-201ENST00000066544 LURAP1Q96LR2 239 aa6.86□□□□□ -1.31
CDC27-201ENST00000066544 MANBALQ9NQG1 85 aa6.86□□□□□ -1.31
CDC27-201ENST00000066544 ZNF71Q9NQZ8 489 aaPredicted RBP6.86□□□□□ -1.31
CDC27-201ENST00000066544 TMEM242Q9NWH2 141 aa6.86□□□□□ -1.31
CDC27-201ENST00000066544 SCO2A0A1W2PP80 73 aa6.85□□□□□ -1.31
CDC27-201ENST00000066544 ADH4P08319 380 aa6.85□□□□□ -1.31
CDC27-201ENST00000066544 FTH1P19P0C7X4 201 aa6.85□□□□□ -1.31
CDC27-201ENST00000066544 GPX4P36969 197 aaPredicted RBP6.85□□□□□ -1.31
CDC27-201ENST00000066544 CALYQ9NYX4 217 aa6.85□□□□□ -1.31
CDC27-201ENST00000066544 MRPL41Q8IXM3 137 aaKnown RBP6.85□□□□□ -1.31
CDC27-201ENST00000066544 SGMS2Q8NHU3 365 aa6.85□□□□□ -1.31
CDC27-201ENST00000066544 CCL13Q99616 98 aa6.85□□□□□ -1.31
CDC27-201ENST00000066544 TRBV20OR9-2A0A075B6H5 130 aa6.85□□□□□ -1.31
CDC27-201ENST00000066544 MGST3O14880 152 aa6.85□□□□□ -1.31
CDC27-201ENST00000066544 TNFSF13O75888 250 aa6.85□□□□□ -1.31
CDC27-201ENST00000066544 HPRT1P00492 218 aa6.85□□□□□ -1.31
CDC27-201ENST00000066544 IGHG3P01860 377 aa6.85□□□□□ -1.31
CDC27-201ENST00000066544 FAM216BQ8N7L0 139 aa6.85□□□□□ -1.31
CDC27-201ENST00000066544 PPP1R35Q8TAP8 253 aa6.85□□□□□ -1.31
CDC27-201ENST00000066544 MGST2Q99735 147 aa6.85□□□□□ -1.31
CDC27-201ENST00000066544 DKK4Q9UBT3 224 aa6.85□□□□□ -1.31
CDC27-201ENST00000066544 SRRM5B3KS81 715 aa6.85□□□□□ -1.31
CDC27-201ENST00000066544 IGHV3-48P01763 117 aa6.85□□□□□ -1.31
CDC27-201ENST00000066544 KITLGP21583 273 aa6.85□□□□□ -1.31
CDC27-201ENST00000066544 IL3RAP26951 378 aa6.85□□□□□ -1.31
CDC27-201ENST00000066544 LINC01551Q86U37 167 aa6.85□□□□□ -1.31
CDC27-201ENST00000066544 SEPSECSQ9HD40 501 aaKnown RBP6.85□□□□□ -1.31
CDC27-201ENST00000066544 A0A087X0M5 115 aa6.84□□□□□ -1.31
CDC27-201ENST00000066544 A0A1B0GX30 115 aa6.84□□□□□ -1.31
CDC27-201ENST00000066544 SLC17A3O00476 420 aa6.84□□□□□ -1.31
CDC27-201ENST00000066544 RBFOX2O43251 390 aaKnown RBP eCLIP6.84□□□□□ -1.31
CDC27-201ENST00000066544 MMP23AO75900 390 aa6.84□□□□□ -1.31
CDC27-201ENST00000066544 NUBP1P53384 320 aa6.84□□□□□ -1.31
CDC27-201ENST00000066544 SPCS3P61009 180 aa6.84□□□□□ -1.31
CDC27-201ENST00000066544 TMEM183AQ8IXX5 376 aa6.84□□□□□ -1.31
CDC27-201ENST00000066544 Q8N7P7 452 aa6.84□□□□□ -1.31
CDC27-201ENST00000066544 TMEM170AQ8WVE7 144 aa6.84□□□□□ -1.31
CDC27-201ENST00000066544 GGTLC1Q9BX51 225 aa6.84□□□□□ -1.31
CDC27-201ENST00000066544 MRPL37Q9BZE1 423 aaKnown RBP6.84□□□□□ -1.31
CDC27-201ENST00000066544 IFI27L2Q9H2X8 130 aa6.84□□□□□ -1.31
CDC27-201ENST00000066544 WNK2Q9Y3S1 2297 aa6.84□□□□□ -1.31
CDC27-201ENST00000066544 GRIFINA4D1Z8 144 aa6.84□□□□□ -1.31
CDC27-201ENST00000066544 GFRA3O60609 400 aa6.84□□□□□ -1.31
CDC27-201ENST00000066544 FOXH1O75593 365 aa6.84□□□□□ -1.31
CDC27-201ENST00000066544 MLANAQ16655 118 aa6.84□□□□□ -1.31
CDC27-201ENST00000066544 CENPVQ7Z7K6 275 aaPredicted RBP6.84□□□□□ -1.31
CDC27-201ENST00000066544 IMMP2LQ96T52 175 aa6.84□□□□□ -1.31
CDC27-201ENST00000066544 ZMAT5Q9UDW3 170 aaKnown RBP6.84□□□□□ -1.31
CDC27-201ENST00000066544 ZNF292O60281 2723 aa6.84□□□□□ -1.31
CDC27-201ENST00000066544 CCL8P80075 99 aa6.84□□□□□ -1.31
CDC27-201ENST00000066544 USF2Q15853 346 aaPredicted RBP6.84□□□□□ -1.31
CDC27-201ENST00000066544 CT45A1Q5HYN5 189 aa6.84□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms