RNA–Protein interactions for RNA: ENSMUST00000131537.8

Lig3-204, Transcript of DNA ligase 3, mousemouse

TSL 1 (best) BASIC

Gene Lig3, Length 1,782 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Lig3-204ENSMUST00000131537 Rims4P60191 269 aa16.42■□□□□ 0.22
Lig3-204ENSMUST00000131537 Tmem88bQ3TYP4 173 aa16.42■□□□□ 0.22
Lig3-204ENSMUST00000131537 Zfp772Q3UQL6 416 aa16.42■□□□□ 0.22
Lig3-204ENSMUST00000131537 Lin54Q571G4 749 aa16.42■□□□□ 0.22
Lig3-204ENSMUST00000131537 Ifna15Q61718 190 aa16.42■□□□□ 0.22
Lig3-204ENSMUST00000131537 Zfp85Q7TMC9 473 aa16.42■□□□□ 0.22
Lig3-204ENSMUST00000131537 Q80X32 188 aaKnown RBP16.42■□□□□ 0.22
Lig3-204ENSMUST00000131537 Aifm2Q8BUE4 373 aa16.42■□□□□ 0.22
Lig3-204ENSMUST00000131537 Esco2Q8CIB9 592 aaKnown RBP16.42■□□□□ 0.22
Lig3-204ENSMUST00000131537 Vmn1r192Q8K4C9 300 aa16.42■□□□□ 0.22
Lig3-204ENSMUST00000131537 Tor2aQ8R1J9 321 aa16.42■□□□□ 0.22
Lig3-204ENSMUST00000131537 QprtQ91X91 299 aa16.42■□□□□ 0.22
Lig3-204ENSMUST00000131537 Exosc4Q921I9 245 aaKnown RBP16.42■□□□□ 0.22
Lig3-204ENSMUST00000131537 Prr30Q9D9B7 401 aa16.42■□□□□ 0.22
Lig3-204ENSMUST00000131537 Abhd5Q9DBL9 351 aa16.42■□□□□ 0.22
Lig3-204ENSMUST00000131537 Kcnk5Q9JK62 502 aa16.42■□□□□ 0.22
Lig3-204ENSMUST00000131537 Olfr548-ps1A0A1B0GSG0 314 aa16.41■□□□□ 0.22
Lig3-204ENSMUST00000131537 Gm27021M0QWE2 156 aa16.41■□□□□ 0.22
Lig3-204ENSMUST00000131537 Atp4bP50992 294 aa16.41■□□□□ 0.22
Lig3-204ENSMUST00000131537 Pax5Q02650 391 aa16.41■□□□□ 0.22
Lig3-204ENSMUST00000131537 Fxyd3Q61835 88 aa16.41■□□□□ 0.22
Lig3-204ENSMUST00000131537 Marveld1Q7TQJ1 173 aa16.41■□□□□ 0.22
Lig3-204ENSMUST00000131537 Ndufb7Q9CR61 137 aa16.41■□□□□ 0.22
Lig3-204ENSMUST00000131537 Ighv1-81A0A075B5Y4 117 aa16.41■□□□□ 0.22
Lig3-204ENSMUST00000131537 Trav7n-5A0A075B604 112 aa16.41■□□□□ 0.22
Lig3-204ENSMUST00000131537 Gm5239D3YYZ2 122 aa16.41■□□□□ 0.22
Lig3-204ENSMUST00000131537 Gm20815J3KMI0 227 aa16.41■□□□□ 0.22
Lig3-204ENSMUST00000131537 Gm20914J3QME2 227 aa16.41■□□□□ 0.22
Lig3-204ENSMUST00000131537 Arl6O88848 186 aa16.41■□□□□ 0.22
Lig3-204ENSMUST00000131537 KhkP97328 298 aa16.41■□□□□ 0.22
Lig3-204ENSMUST00000131537 FshbQ60687 130 aa16.41■□□□□ 0.22
Lig3-204ENSMUST00000131537 AgaQ64191 346 aa16.41■□□□□ 0.22
Lig3-204ENSMUST00000131537 Spin2cQ6NVE3 257 aa16.41■□□□□ 0.22
Lig3-204ENSMUST00000131537 Sat2Q6P8J2 170 aa16.41■□□□□ 0.22
Lig3-204ENSMUST00000131537 Gm21292Q78EE2 227 aa16.41■□□□□ 0.22
Lig3-204ENSMUST00000131537 Tspan9Q8BJU2 239 aa16.41■□□□□ 0.22
Lig3-204ENSMUST00000131537 Nhlrc3Q8CCH2 347 aa16.41■□□□□ 0.22
Lig3-204ENSMUST00000131537 Slc1a7Q8JZR4 559 aa16.41■□□□□ 0.22
Lig3-204ENSMUST00000131537 Fn3krpQ8K274 309 aa16.41■□□□□ 0.22
Lig3-204ENSMUST00000131537 Lrrtm1Q8K377 522 aa16.41■□□□□ 0.22
Lig3-204ENSMUST00000131537 Hoxc12Q8K5B8 280 aa16.41■□□□□ 0.22
Lig3-204ENSMUST00000131537 NepnQ9CQ76 512 aa16.41■□□□□ 0.22
Lig3-204ENSMUST00000131537 Sft2d3Q9CSV6 209 aa16.41■□□□□ 0.22
Lig3-204ENSMUST00000131537 Vmn1r47Q9EQ51 310 aa16.41■□□□□ 0.22
Lig3-204ENSMUST00000131537 PthQ9Z0L6 115 aa16.41■□□□□ 0.22
Lig3-204ENSMUST00000131537 Prrc2cQ3TLH4 2846 aaKnown RBP16.4■□□□□ 0.22
Lig3-204ENSMUST00000131537 Ankdd1aA0A1L1ST07 508 aa16.4■□□□□ 0.22
Lig3-204ENSMUST00000131537 Gm4884E9PVP9 694 aa16.4■□□□□ 0.22
Lig3-204ENSMUST00000131537 PomcP01193 235 aa16.4■□□□□ 0.22
Lig3-204ENSMUST00000131537 Cxcl5P50228 132 aa16.4■□□□□ 0.22
Lig3-204ENSMUST00000131537 Aqp2P56402 271 aa16.4■□□□□ 0.22
Lig3-204ENSMUST00000131537 Sult4a1P63046 284 aa16.4■□□□□ 0.22
Lig3-204ENSMUST00000131537 Foxf1Q61080 378 aa16.4■□□□□ 0.22
Lig3-204ENSMUST00000131537 Smim12Q78RX3 92 aa16.4■□□□□ 0.22
Lig3-204ENSMUST00000131537 Spink6Q8BT20 105 aa16.4■□□□□ 0.22
Lig3-204ENSMUST00000131537 Olfr720Q8VF37 316 aa16.4■□□□□ 0.22
Lig3-204ENSMUST00000131537 LitafQ9JLJ0 161 aa16.4■□□□□ 0.22
Lig3-204ENSMUST00000131537 Armcx4E9PWM3 2356 aa16.39■□□□□ 0.21
Lig3-204ENSMUST00000131537 Tomm5B1AXP6 51 aa16.39■□□□□ 0.21
Lig3-204ENSMUST00000131537 Olfr1154L7MU57 310 aa16.39■□□□□ 0.21
Lig3-204ENSMUST00000131537 P01798 113 aa16.39■□□□□ 0.21
Lig3-204ENSMUST00000131537 Igsf11P0C673 428 aa16.39■□□□□ 0.21
Lig3-204ENSMUST00000131537 Cyb5aP56395 134 aa16.39■□□□□ 0.21
Lig3-204ENSMUST00000131537 Shisa3Q3UPR0 238 aa16.39■□□□□ 0.21
Lig3-204ENSMUST00000131537 B020031M17RikQ3UT11 173 aa16.39■□□□□ 0.21
Lig3-204ENSMUST00000131537 Pld6Q5SWZ9 221 aa16.39■□□□□ 0.21
Lig3-204ENSMUST00000131537 Cbx5Q61686 191 aaKnown RBP16.39■□□□□ 0.21
Lig3-204ENSMUST00000131537 Olfr222Q7TS30 318 aa16.39■□□□□ 0.21
Lig3-204ENSMUST00000131537 Osbpl11Q8CI95 751 aa16.39■□□□□ 0.21
Lig3-204ENSMUST00000131537 B3gnt8Q8R3I9 389 aa16.39■□□□□ 0.21
Lig3-204ENSMUST00000131537 Ccdc167Q9D162 97 aa16.39■□□□□ 0.21
Lig3-204ENSMUST00000131537 Prkar1aQ9DBC7 381 aa16.39■□□□□ 0.21
Lig3-204ENSMUST00000131537 Cd200r1Q9ES57 326 aa16.39■□□□□ 0.21
Lig3-204ENSMUST00000131537 P2ry14Q9ESG6 338 aa16.39■□□□□ 0.21
Lig3-204ENSMUST00000131537 Mrpl39Q9JKF7 336 aa16.39■□□□□ 0.21
Lig3-204ENSMUST00000131537 Olfr1406E9Q8X1 310 aa16.38■□□□□ 0.21
Lig3-204ENSMUST00000131537 Iqcf6G3UWF2 157 aa16.38■□□□□ 0.21
Lig3-204ENSMUST00000131537 Crisp2P16563 243 aa16.38■□□□□ 0.21
Lig3-204ENSMUST00000131537 Zfp7Q3TFZ4 685 aa16.38■□□□□ 0.21
Lig3-204ENSMUST00000131537 Olfr1383Q7TQT2 311 aa16.38■□□□□ 0.21
Lig3-204ENSMUST00000131537 Actbl2Q8BFZ3 376 aa16.38■□□□□ 0.21
Lig3-204ENSMUST00000131537 Iqcf5Q9DAL7 148 aa16.38■□□□□ 0.21
Lig3-204ENSMUST00000131537 Ndrg3Q9QYF9 375 aa16.38■□□□□ 0.21
Lig3-204ENSMUST00000131537 Syt6Q9R0N8 511 aa16.38■□□□□ 0.21
Lig3-204ENSMUST00000131537 Ighv5-15A0A0A6YWC7 117 aa16.38■□□□□ 0.21
Lig3-204ENSMUST00000131537 Olfr1130A0A1L1SQT2 314 aa16.38■□□□□ 0.21
Lig3-204ENSMUST00000131537 Gm21761J3QK00 171 aa16.38■□□□□ 0.21
Lig3-204ENSMUST00000131537 Mdga2P60755 949 aa16.38■□□□□ 0.21
Lig3-204ENSMUST00000131537 Gm12258Q5NC63 627 aa16.38■□□□□ 0.21
Lig3-204ENSMUST00000131537 Adh7Q64437 374 aa16.38■□□□□ 0.21
Lig3-204ENSMUST00000131537 Zfp663Q6NXM6 656 aa16.38■□□□□ 0.21
Lig3-204ENSMUST00000131537 Tmem17Q8K0U3 198 aa16.38■□□□□ 0.21
Lig3-204ENSMUST00000131537 Ms4a4dQ99N05 225 aa16.38■□□□□ 0.21
Lig3-204ENSMUST00000131537 Mrps24Q9CQV5 167 aa16.38■□□□□ 0.21
Lig3-204ENSMUST00000131537 SdhcQ9CZB0 169 aaKnown RBP16.38■□□□□ 0.21
Lig3-204ENSMUST00000131537 Olfr951Q9EQ94 314 aa16.38■□□□□ 0.21
Lig3-204ENSMUST00000131537 Qrich2A0A140LIY9 2337 aa16.37■□□□□ 0.21
Lig3-204ENSMUST00000131537 Trav12-1A0N8R1 115 aa16.37■□□□□ 0.21
Lig3-204ENSMUST00000131537 A930017K11RikE0CXQ2 571 aa16.37■□□□□ 0.21
Lig3-204ENSMUST00000131537 Vmn1r129E9QA94 307 aa16.37■□□□□ 0.21
Retrieved 100 of 22,080 RNA–protein pairs in 43.2 ms