RNA–Protein interactions for RNA: ENSMUST00000028280.13

Col5a1-201, Transcript of Collagen alpha-1(V) chain, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Col5a1, Length 8,406 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col5a1-201ENSMUST00000028280 Rps19bp1Q8C6B9 143 aaKnown RBP12.44□□□□□ -0.42
Col5a1-201ENSMUST00000028280 Cst6Q9D1B1 149 aa12.44□□□□□ -0.42
Col5a1-201ENSMUST00000028280 Fbxo25Q9D2Y6 357 aa12.44□□□□□ -0.42
Col5a1-201ENSMUST00000028280 Srsf10Q9R0U0 262 aaKnown RBP12.44□□□□□ -0.42
Col5a1-201ENSMUST00000028280 Sp3O70494 783 aa12.44□□□□□ -0.42
Col5a1-201ENSMUST00000028280 Gng3P63216 75 aa12.44□□□□□ -0.42
Col5a1-201ENSMUST00000028280 Sfrp2P97299 295 aa12.44□□□□□ -0.42
Col5a1-201ENSMUST00000028280 Ndufb6Q3UIU2 128 aa12.44□□□□□ -0.42
Col5a1-201ENSMUST00000028280 Slc16a11Q5NC32 447 aa12.44□□□□□ -0.42
Col5a1-201ENSMUST00000028280 Olfr5Q60889 312 aa12.44□□□□□ -0.42
Col5a1-201ENSMUST00000028280 Tmem25Q9DCF1 365 aa12.44□□□□□ -0.42
Col5a1-201ENSMUST00000028280 MpgQ04841 333 aaKnown RBP12.43□□□□□ -0.42
Col5a1-201ENSMUST00000028280 Olfr324Q5NCC7 333 aa12.43□□□□□ -0.42
Col5a1-201ENSMUST00000028280 Olfr527Q7TRT9 305 aa12.43□□□□□ -0.42
Col5a1-201ENSMUST00000028280 Fbxl14Q8BID8 400 aa12.43□□□□□ -0.42
Col5a1-201ENSMUST00000028280 Tmed6Q9CQG0 239 aa12.43□□□□□ -0.42
Col5a1-201ENSMUST00000028280 Psmg3Q9CZH3 122 aa12.43□□□□□ -0.42
Col5a1-201ENSMUST00000028280 Gm19410A0A140LJC7 2098 aa12.43□□□□□ -0.42
Col5a1-201ENSMUST00000028280 Gm7849D3YX03 116 aa12.43□□□□□ -0.42
Col5a1-201ENSMUST00000028280 Scand1Q2M4I6 142 aa12.43□□□□□ -0.42
Col5a1-201ENSMUST00000028280 Kcnab1P63143 401 aa12.43□□□□□ -0.42
Col5a1-201ENSMUST00000028280 Ppp1r3cQ7TMB3 317 aa12.43□□□□□ -0.42
Col5a1-201ENSMUST00000028280 Parp16Q7TMM8 322 aa12.43□□□□□ -0.42
Col5a1-201ENSMUST00000028280 Olfr536Q8VFE9 307 aa12.43□□□□□ -0.42
Col5a1-201ENSMUST00000028280 Ammecr1Q9JHT5 344 aaKnown RBP12.43□□□□□ -0.42
Col5a1-201ENSMUST00000028280 Sned1Q70E20 1403 aa12.43□□□□□ -0.42
Col5a1-201ENSMUST00000028280 Gm14444A2ARW3 426 aa12.43□□□□□ -0.42
Col5a1-201ENSMUST00000028280 Bcl7cO08664 217 aa12.43□□□□□ -0.42
Col5a1-201ENSMUST00000028280 Coq2Q66JT7 374 aa12.43□□□□□ -0.42
Col5a1-201ENSMUST00000028280 MfngO09008 321 aa12.43□□□□□ -0.42
Col5a1-201ENSMUST00000028280 Mmp9P41245 730 aa12.43□□□□□ -0.42
Col5a1-201ENSMUST00000028280 MepeQ8K4L6 441 aa12.43□□□□□ -0.42
Col5a1-201ENSMUST00000028280 Fahd1Q8R0F8 227 aa12.43□□□□□ -0.42
Col5a1-201ENSMUST00000028280 Fbxl17Q9QZN1 701 aa12.43□□□□□ -0.42
Col5a1-201ENSMUST00000028280 Gm10644Q3TZG3 87 aa12.43□□□□□ -0.42
Col5a1-201ENSMUST00000028280 Dock6Q8VDR9 2080 aa12.43□□□□□ -0.42
Col5a1-201ENSMUST00000028280 Olfr1368Q8VFG3 314 aa12.43□□□□□ -0.42
Col5a1-201ENSMUST00000028280 Mdp1Q9D967 164 aa12.43□□□□□ -0.42
Col5a1-201ENSMUST00000028280 Tmem27Q9ESG4 222 aa12.43□□□□□ -0.42
Col5a1-201ENSMUST00000028280 Dbx1P52950 335 aa12.42□□□□□ -0.42
Col5a1-201ENSMUST00000028280 Slc25a33Q3TZX3 320 aa12.42□□□□□ -0.42
Col5a1-201ENSMUST00000028280 Pafah1b2Q61206 229 aa12.42□□□□□ -0.42
Col5a1-201ENSMUST00000028280 Tnfsf15Q5UBV8 252 aa12.42□□□□□ -0.42
Col5a1-201ENSMUST00000028280 BsxQ810B3 232 aa12.42□□□□□ -0.42
Col5a1-201ENSMUST00000028280 Cypt1Q8CH20 168 aa12.42□□□□□ -0.42
Col5a1-201ENSMUST00000028280 Olfr1440Q8VFV4 315 aa12.42□□□□□ -0.42
Col5a1-201ENSMUST00000028280 Mrpl20Q9CQL4 149 aa12.42□□□□□ -0.42
Col5a1-201ENSMUST00000028280 Mlf1Q9QWV4 267 aa12.42□□□□□ -0.42
Col5a1-201ENSMUST00000028280 Olfr1118A0A0J9YUE7 307 aa12.42□□□□□ -0.42
Col5a1-201ENSMUST00000028280 Igkv1-131A0A140T8M8 120 aa12.42□□□□□ -0.42
Col5a1-201ENSMUST00000028280 Cited2O35740 269 aa12.42□□□□□ -0.42
Col5a1-201ENSMUST00000028280 ThbdP15306 577 aa12.42□□□□□ -0.42
Col5a1-201ENSMUST00000028280 P2ry1P49650 373 aa12.42□□□□□ -0.42
Col5a1-201ENSMUST00000028280 Agbl4Q09LZ8 540 aa12.42□□□□□ -0.42
Col5a1-201ENSMUST00000028280 Olfr149Q60888 311 aa12.42□□□□□ -0.42
Col5a1-201ENSMUST00000028280 Rer1Q9CQU3 196 aaKnown RBP12.42□□□□□ -0.42
Col5a1-201ENSMUST00000028280 Ankrd65F6YK91 380 aa12.42□□□□□ -0.42
Col5a1-201ENSMUST00000028280 Gm20815J3KMI0 227 aa12.42□□□□□ -0.42
Col5a1-201ENSMUST00000028280 Gm20914J3QME2 227 aa12.42□□□□□ -0.42
Col5a1-201ENSMUST00000028280 Slc6a12P31651 614 aa12.42□□□□□ -0.42
Col5a1-201ENSMUST00000028280 Prrx2Q06348 247 aa12.42□□□□□ -0.42
Col5a1-201ENSMUST00000028280 Gm21292Q78EE2 227 aa12.42□□□□□ -0.42
Col5a1-201ENSMUST00000028280 Olfr1535Q7TQU0 326 aa12.42□□□□□ -0.42
Col5a1-201ENSMUST00000028280 Olfr1079Q8VF52 315 aa12.42□□□□□ -0.42
Col5a1-201ENSMUST00000028280 Olfr816Q8VFU2 312 aa12.42□□□□□ -0.42
Col5a1-201ENSMUST00000028280 Zfp688E9Q5M9 274 aa12.42□□□□□ -0.42
Col5a1-201ENSMUST00000028280 9130019O22RikG3X941 543 aa12.42□□□□□ -0.42
Col5a1-201ENSMUST00000028280 EllO08856 602 aa12.42□□□□□ -0.42
Col5a1-201ENSMUST00000028280 Gcm2O09102 504 aa12.42□□□□□ -0.42
Col5a1-201ENSMUST00000028280 Aqp7O54794 303 aa12.42□□□□□ -0.42
Col5a1-201ENSMUST00000028280 Shc1P98083 579 aa12.42□□□□□ -0.42
Col5a1-201ENSMUST00000028280 Tcfl5Q32NY8 489 aa12.42□□□□□ -0.42
Col5a1-201ENSMUST00000028280 Btf3Q64152 204 aaKnown RBP12.42□□□□□ -0.42
Col5a1-201ENSMUST00000028280 Nubp1Q9R060 320 aa12.42□□□□□ -0.42
Col5a1-201ENSMUST00000028280 RbpjlO08674 515 aa12.42□□□□□ -0.42
Col5a1-201ENSMUST00000028280 Itln1O88310 313 aa12.42□□□□□ -0.42
Col5a1-201ENSMUST00000028280 Cnr1P47746 473 aa12.42□□□□□ -0.42
Col5a1-201ENSMUST00000028280 PmelQ60696 626 aa12.42□□□□□ -0.42
Col5a1-201ENSMUST00000028280 Lefty1Q64280 368 aa12.42□□□□□ -0.42
Col5a1-201ENSMUST00000028280 Cdhr3Q8BL00 831 aa12.42□□□□□ -0.42
Col5a1-201ENSMUST00000028280 Cbln4Q8BME9 198 aa12.42□□□□□ -0.42
Col5a1-201ENSMUST00000028280 Muc20Q8BUE7 656 aa12.42□□□□□ -0.42
Col5a1-201ENSMUST00000028280 Rhbdd2Q8VEK2 361 aa12.42□□□□□ -0.42
Col5a1-201ENSMUST00000028280 Mrps18bQ99N84 254 aa12.42□□□□□ -0.42
Col5a1-201ENSMUST00000028280 E030030I06RikJ3QML9 246 aa12.41□□□□□ -0.42
Col5a1-201ENSMUST00000028280 OtpO09113 325 aa12.41□□□□□ -0.42
Col5a1-201ENSMUST00000028280 Gsx1P31315 261 aa12.41□□□□□ -0.42
Col5a1-201ENSMUST00000028280 Pax4P32115 349 aa12.41□□□□□ -0.42
Col5a1-201ENSMUST00000028280 Bpifb3Q80ZU7 473 aa12.41□□□□□ -0.42
Col5a1-201ENSMUST00000028280 Fgfrl1Q91V87 529 aa12.41□□□□□ -0.42
Col5a1-201ENSMUST00000028280 1700025F22RikQ9D9Y7 111 aa12.41□□□□□ -0.42
Col5a1-201ENSMUST00000028280 Trav1A0A075B5Z4 110 aa12.41□□□□□ -0.42
Col5a1-201ENSMUST00000028280 Prrt2E9PUL5 346 aa12.41□□□□□ -0.42
Col5a1-201ENSMUST00000028280 Defa16P50714 93 aa12.41□□□□□ -0.42
Col5a1-201ENSMUST00000028280 Q8C784 167 aa12.41□□□□□ -0.42
Col5a1-201ENSMUST00000028280 Rcc1lQ9CYF5 461 aa12.41□□□□□ -0.42
Col5a1-201ENSMUST00000028280 Mfap5Q9QZJ6 164 aa12.41□□□□□ -0.42
Col5a1-201ENSMUST00000028280 Gm21746J3QMM6 180 aa12.41□□□□□ -0.42
Col5a1-201ENSMUST00000028280 Irs3O54718 495 aa12.41□□□□□ -0.42
Col5a1-201ENSMUST00000028280 Evx1P23683 416 aa12.41□□□□□ -0.42
Retrieved 100 of 22,080 RNA–protein pairs in 32.4 ms