RNA–Protein interactions for RNA: ENST00000641847.1

PHGDH-228, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 692 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-228ENST00000641847 CFHR4Q92496 578 aa7.53□□□□□ -1.2
PHGDH-228ENST00000641847 RBMXL1Q96E39 390 aaKnown RBP7.53□□□□□ -1.2
PHGDH-228ENST00000641847 GPN1Q9HCN4 374 aaPredicted RBP7.53□□□□□ -1.2
PHGDH-228ENST00000641847 KCNIP3Q9Y2W7 256 aa7.53□□□□□ -1.2
PHGDH-228ENST00000641847 FAM96BQ9Y3D0 163 aa7.53□□□□□ -1.2
PHGDH-228ENST00000641847 C7orf66A4D0T2 115 aa7.52□□□□□ -1.21
PHGDH-228ENST00000641847 SNRPGP15A8MWD9 76 aa7.52□□□□□ -1.21
PHGDH-228ENST00000641847 RBFOX2O43251 390 aaKnown RBP eCLIP7.52□□□□□ -1.21
PHGDH-228ENST00000641847 S1PR2O95136 353 aa7.52□□□□□ -1.21
PHGDH-228ENST00000641847 NDUFA7O95182 113 aa7.52□□□□□ -1.21
PHGDH-228ENST00000641847 DUS4LO95620 317 aaKnown RBP7.52□□□□□ -1.21
PHGDH-228ENST00000641847 CRYZL1O95825 349 aa7.52□□□□□ -1.21
PHGDH-228ENST00000641847 SERPINE2P07093 398 aa7.52□□□□□ -1.21
PHGDH-228ENST00000641847 FBP1P09467 338 aa7.52□□□□□ -1.21
PHGDH-228ENST00000641847 RRASP10301 218 aa7.52□□□□□ -1.21
PHGDH-228ENST00000641847 UCP1P25874 307 aa7.52□□□□□ -1.21
PHGDH-228ENST00000641847 BRWD1-AS2P59051 145 aa7.52□□□□□ -1.21
PHGDH-228ENST00000641847 HABP2Q14520 560 aaPredicted RBP7.52□□□□□ -1.21
PHGDH-228ENST00000641847 TMEM187Q14656 261 aa7.52□□□□□ -1.21
PHGDH-228ENST00000641847 ANKRD55Q3KP44 614 aa7.52□□□□□ -1.21
PHGDH-228ENST00000641847 DHRS7BQ6IAN0 325 aaPredicted RBP7.52□□□□□ -1.21
PHGDH-228ENST00000641847 LIN54Q6MZP7 749 aa7.52□□□□□ -1.21
PHGDH-228ENST00000641847 LIAT1Q6ZQX7 453 aa7.52□□□□□ -1.21
PHGDH-228ENST00000641847 PDPNQ86YL7 162 aa7.52□□□□□ -1.21
PHGDH-228ENST00000641847 LGI3Q8N145 548 aa7.52□□□□□ -1.21
PHGDH-228ENST00000641847 TCTEX1D1Q8N7M0 179 aa7.52□□□□□ -1.21
PHGDH-228ENST00000641847 LHFPL5Q8TAF8 219 aa7.52□□□□□ -1.21
PHGDH-228ENST00000641847 CD300LFQ8TDQ1 290 aa7.52□□□□□ -1.21
PHGDH-228ENST00000641847 MITD1Q8WV92 249 aa7.52□□□□□ -1.21
PHGDH-228ENST00000641847 TAF15Q92804 592 aaKnown RBP eCLIP7.52□□□□□ -1.21
PHGDH-228ENST00000641847 PHB2Q99623 299 aa7.52□□□□□ -1.21
PHGDH-228ENST00000641847 TMEM222Q9H0R3 208 aa7.52□□□□□ -1.21
PHGDH-228ENST00000641847 SSNA1O43805 119 aa7.51□□□□□ -1.21
PHGDH-228ENST00000641847 IGKV1D-33P01593 117 aa7.51□□□□□ -1.21
PHGDH-228ENST00000641847 IGKV1-33P01594 117 aa7.51□□□□□ -1.21
PHGDH-228ENST00000641847 IGKV1-16P04430 117 aa7.51□□□□□ -1.21
PHGDH-228ENST00000641847 SNRNP70P08621 437 aaKnown RBP7.51□□□□□ -1.21
PHGDH-228ENST00000641847 CD24P25063 80 aa7.51□□□□□ -1.21
PHGDH-228ENST00000641847 CD1BP29016 333 aa7.51□□□□□ -1.21
PHGDH-228ENST00000641847 BRS3P32247 399 aa7.51□□□□□ -1.21
PHGDH-228ENST00000641847 MC5RP33032 325 aa7.51□□□□□ -1.21
PHGDH-228ENST00000641847 LPAR6P43657 344 aa7.51□□□□□ -1.21
PHGDH-228ENST00000641847 SRPXP78539 464 aa7.51□□□□□ -1.21
PHGDH-228ENST00000641847 LRRC75BQ2VPJ9 315 aa7.51□□□□□ -1.21
PHGDH-228ENST00000641847 DEFB112Q30KQ8 113 aa7.51□□□□□ -1.21
PHGDH-228ENST00000641847 ZNF585BQ52M93 769 aa7.51□□□□□ -1.21
PHGDH-228ENST00000641847 TMEM268Q5VZI3 342 aa7.51□□□□□ -1.21
PHGDH-228ENST00000641847 ZNF695Q8IW36 515 aa7.51□□□□□ -1.21
PHGDH-228ENST00000641847 SELENOHQ8IZQ5 122 aaKnown RBP7.51□□□□□ -1.21
PHGDH-228ENST00000641847 C12orf45Q8N5I9 185 aaPredicted RBP7.51□□□□□ -1.21
PHGDH-228ENST00000641847 GLYATL2Q8WU03 294 aa7.51□□□□□ -1.21
PHGDH-228ENST00000641847 TMEM56Q96MV1 263 aa7.51□□□□□ -1.21
PHGDH-228ENST00000641847 ZNF48Q96MX3 618 aaPredicted RBP7.51□□□□□ -1.21
PHGDH-228ENST00000641847 MEGF9Q9H1U4 602 aa7.51□□□□□ -1.21
PHGDH-228ENST00000641847 OR51J1Q9H342 316 aa7.51□□□□□ -1.21
PHGDH-228ENST00000641847 PLEKHA2Q9HB19 425 aa7.51□□□□□ -1.21
PHGDH-228ENST00000641847 FAM212BQ9NTI7 297 aaPredicted RBP7.51□□□□□ -1.21
PHGDH-228ENST00000641847 COMMD9Q9P000 198 aa7.51□□□□□ -1.21
PHGDH-228ENST00000641847 RNF114Q9Y508 228 aa7.51□□□□□ -1.21
PHGDH-228ENST00000641847 TMEM56-RWDD3S4R434 201 aa7.51□□□□□ -1.21
PHGDH-228ENST00000641847 BIRC6Q9NR09 4857 aa7.5□□□□□ -1.21
PHGDH-228ENST00000641847 hCG_2014768A0A024R1R8 64 aa7.5□□□□□ -1.21
PHGDH-228ENST00000641847 A0A0B4J2A0 478 aa7.5□□□□□ -1.21
PHGDH-228ENST00000641847 SHOXO15266 292 aa7.5□□□□□ -1.21
PHGDH-228ENST00000641847 HOXA3O43365 443 aaPredicted RBP7.5□□□□□ -1.21
PHGDH-228ENST00000641847 CDS2O95674 445 aa7.5□□□□□ -1.21
PHGDH-228ENST00000641847 HPRT1P00492 218 aa7.5□□□□□ -1.21
PHGDH-228ENST00000641847 IGKV1-39P01597 117 aa7.5□□□□□ -1.21
PHGDH-228ENST00000641847 IGKV1D-39P04432 117 aa7.5□□□□□ -1.21
PHGDH-228ENST00000641847 RPA2P15927 270 aa7.5□□□□□ -1.21
PHGDH-228ENST00000641847 DYNLT3P51808 116 aa7.5□□□□□ -1.21
PHGDH-228ENST00000641847 AKR1C2P52895 323 aa7.5□□□□□ -1.21
PHGDH-228ENST00000641847 RPL15P61313 204 aaKnown RBP7.5□□□□□ -1.21
PHGDH-228ENST00000641847 HES1Q14469 280 aa7.5□□□□□ -1.21
PHGDH-228ENST00000641847 BEAN1Q3B7T3 259 aa7.5□□□□□ -1.21
PHGDH-228ENST00000641847 TMEM177Q53S58 311 aa7.5□□□□□ -1.21
PHGDH-228ENST00000641847 SLC35G3Q8N808 338 aa7.5□□□□□ -1.21
PHGDH-228ENST00000641847 LRTM2Q8N967 370 aa7.5□□□□□ -1.21
PHGDH-228ENST00000641847 UXS1Q8NBZ7 420 aa7.5□□□□□ -1.21
PHGDH-228ENST00000641847 OR4C13Q8NGP0 309 aa7.5□□□□□ -1.21
PHGDH-228ENST00000641847 RNASE11Q8TAA1 199 aaKnown RBP7.5□□□□□ -1.21
PHGDH-228ENST00000641847 OSR1Q8TAX0 266 aaPredicted RBP7.5□□□□□ -1.21
PHGDH-228ENST00000641847 RBPMSQ93062 196 aaKnown RBP7.5□□□□□ -1.21
PHGDH-228ENST00000641847 IL22RA2Q969J5 263 aa7.5□□□□□ -1.21
PHGDH-228ENST00000641847 FLYWCH2Q96CP2 140 aaKnown RBP7.5□□□□□ -1.21
PHGDH-228ENST00000641847 R3HDM4Q96D70 268 aa7.5□□□□□ -1.21
PHGDH-228ENST00000641847 HARBI1Q96MB7 349 aa7.5□□□□□ -1.21
PHGDH-228ENST00000641847 SHPKQ9UHJ6 478 aa7.5□□□□□ -1.21
PHGDH-228ENST00000641847 COL7A1Q02388 2944 aa7.49□□□□□ -1.21
PHGDH-228ENST00000641847 A0A1B0GVG6 124 aa7.49□□□□□ -1.21
PHGDH-228ENST00000641847 MARCH11A6NNE9 402 aa7.49□□□□□ -1.21
PHGDH-228ENST00000641847 FAM90A9PA6NNJ1 464 aa7.49□□□□□ -1.21
PHGDH-228ENST00000641847 VGLL3A8MV65 326 aa7.49□□□□□ -1.21
PHGDH-228ENST00000641847 G3V4G9 280 aa7.49□□□□□ -1.21
PHGDH-228ENST00000641847 H3BUX3 64 aa7.49□□□□□ -1.21
PHGDH-228ENST00000641847 CCSO14618 274 aa7.49□□□□□ -1.21
PHGDH-228ENST00000641847 GOSR2O14653 212 aa7.49□□□□□ -1.21
PHGDH-228ENST00000641847 ATG12O94817 140 aa7.49□□□□□ -1.21
PHGDH-228ENST00000641847 TSPAN15O95858 294 aa7.49□□□□□ -1.21
PHGDH-228ENST00000641847 MOSP00540 346 aa7.49□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms