RNA–Protein interactions for RNA: ENST00000641272.1

PHGDH-213, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 758 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-213ENST00000641272 ADTRPQ96IZ2 230 aa12.68□□□□□ -0.38
PHGDH-213ENST00000641272 DCUN1D5Q9BTE7 237 aa12.68□□□□□ -0.38
PHGDH-213ENST00000641272 ATG5Q9H1Y0 275 aa12.68□□□□□ -0.38
PHGDH-213ENST00000641272 OR2J3O76001 311 aa12.67□□□□□ -0.38
PHGDH-213ENST00000641272 DIRAS3O95661 229 aa12.67□□□□□ -0.38
PHGDH-213ENST00000641272 RAB3BP20337 219 aa12.67□□□□□ -0.38
PHGDH-213ENST00000641272 RAB6AP20340 208 aa12.67□□□□□ -0.38
PHGDH-213ENST00000641272 NFYAP23511 347 aaPredicted RBP12.67□□□□□ -0.38
PHGDH-213ENST00000641272 PSMD7P51665 324 aa12.67□□□□□ -0.38
PHGDH-213ENST00000641272 CD81P60033 236 aa12.67□□□□□ -0.38
PHGDH-213ENST00000641272 C22orf42Q6IC83 251 aa12.67□□□□□ -0.38
PHGDH-213ENST00000641272 IZUMO2Q6UXV1 221 aa12.67□□□□□ -0.38
PHGDH-213ENST00000641272 VKORC1L1Q8N0U8 176 aa12.67□□□□□ -0.38
PHGDH-213ENST00000641272 TEX45Q8NA69 505 aa12.67□□□□□ -0.38
PHGDH-213ENST00000641272 NUDCD2Q8WVJ2 157 aa12.67□□□□□ -0.38
PHGDH-213ENST00000641272 NDUFB11Q9NX14 153 aa12.67□□□□□ -0.38
PHGDH-213ENST00000641272 TRAV1-2A0A0B4J238 106 aa12.66□□□□□ -0.38
PHGDH-213ENST00000641272 HMX3A6NHT5 357 aa12.66□□□□□ -0.38
PHGDH-213ENST00000641272 PPP5D1E7EU14 171 aa12.66□□□□□ -0.38
PHGDH-213ENST00000641272 TUSC2O75896 110 aa12.66□□□□□ -0.38
PHGDH-213ENST00000641272 ACTL6BO94805 426 aa12.66□□□□□ -0.38
PHGDH-213ENST00000641272 BRI3O95415 125 aa12.66□□□□□ -0.38
PHGDH-213ENST00000641272 HLA-AP01891 365 aaKnown RBP12.66□□□□□ -0.38
PHGDH-213ENST00000641272 RPL30P62888 115 aaKnown RBP12.66□□□□□ -0.38
PHGDH-213ENST00000641272 CDK10Q15131 360 aa12.66□□□□□ -0.38
PHGDH-213ENST00000641272 TATDN3Q17R31 274 aa12.66□□□□□ -0.38
PHGDH-213ENST00000641272 OSR1Q8TAX0 266 aaPredicted RBP12.66□□□□□ -0.38
PHGDH-213ENST00000641272 DYNLRB2Q8TF09 96 aa12.66□□□□□ -0.38
PHGDH-213ENST00000641272 SNAPC3Q92966 411 aa12.66□□□□□ -0.38
PHGDH-213ENST00000641272 PEMTQ9UBM1 199 aa12.66□□□□□ -0.38
PHGDH-213ENST00000641272 S4R3C0 116 aa12.66□□□□□ -0.38
PHGDH-213ENST00000641272 IGKV1D-13A0A0B4J2D9 117 aa12.65□□□□□ -0.38
PHGDH-213ENST00000641272 METTL21EPA6NDL7 271 aa12.65□□□□□ -0.38
PHGDH-213ENST00000641272 FAM223BA6NKX1 122 aa12.65□□□□□ -0.38
PHGDH-213ENST00000641272 IGHV3-23P01764 117 aa12.65□□□□□ -0.38
PHGDH-213ENST00000641272 CD7P09564 240 aa12.65□□□□□ -0.38
PHGDH-213ENST00000641272 IGKV1-13P0DP09 117 aa12.65□□□□□ -0.38
PHGDH-213ENST00000641272 RANBP1P43487 201 aa12.65□□□□□ -0.38
PHGDH-213ENST00000641272 ATP5G2Q06055 141 aa12.65□□□□□ -0.38
PHGDH-213ENST00000641272 CD300EQ496F6 205 aaPredicted RBP12.65□□□□□ -0.38
PHGDH-213ENST00000641272 FAM223AQ8IWN6 122 aa12.65□□□□□ -0.38
PHGDH-213ENST00000641272 ZNF645Q8N7E2 425 aa12.65□□□□□ -0.38
PHGDH-213ENST00000641272 ST6GALNAC5Q9BVH7 336 aa12.65□□□□□ -0.38
PHGDH-213ENST00000641272 CEPT1Q9Y6K0 416 aa12.65□□□□□ -0.38
PHGDH-213ENST00000641272 TMEM235A6NFC5 223 aa12.64□□□□□ -0.39
PHGDH-213ENST00000641272 IFNA6P05013 189 aa12.64□□□□□ -0.39
PHGDH-213ENST00000641272 DTYMKP23919 212 aa12.64□□□□□ -0.39
PHGDH-213ENST00000641272 C15orf32Q32M92 178 aa12.64□□□□□ -0.39
PHGDH-213ENST00000641272 CDNFQ49AH0 187 aa12.64□□□□□ -0.39
PHGDH-213ENST00000641272 Q6ZS49 121 aa12.64□□□□□ -0.39
PHGDH-213ENST00000641272 MMD2Q8IY49 270 aa12.64□□□□□ -0.39
PHGDH-213ENST00000641272 DEFB125Q8N687 156 aa12.64□□□□□ -0.39
PHGDH-213ENST00000641272 TCTEX1D2Q8WW35 142 aa12.64□□□□□ -0.39
PHGDH-213ENST00000641272 CACNG8Q8WXS5 425 aa12.64□□□□□ -0.39
PHGDH-213ENST00000641272 GPHA2Q96T91 129 aa12.64□□□□□ -0.39
PHGDH-213ENST00000641272 SPIN2AQ99865 258 aa12.64□□□□□ -0.39
PHGDH-213ENST00000641272 SPIN2BQ9BPZ2 258 aa12.64□□□□□ -0.39
PHGDH-213ENST00000641272 NEURL2Q9BR09 285 aa12.64□□□□□ -0.39
PHGDH-213ENST00000641272 SIGLEC8Q9NYZ4 499 aa12.64□□□□□ -0.39
PHGDH-213ENST00000641272 MRPS7Q9Y2R9 242 aaKnown RBP12.64□□□□□ -0.39
PHGDH-213ENST00000641272 RBMX2Q9Y388 322 aaKnown RBP12.64□□□□□ -0.39
PHGDH-213ENST00000641272 HYDINQ4G0P3 5121 aa12.64□□□□□ -0.39
PHGDH-213ENST00000641272 TRBV9A0A0B4J1U6 114 aa12.63□□□□□ -0.39
PHGDH-213ENST00000641272 TRDV1A0A1B0GX56 115 aa12.63□□□□□ -0.39
PHGDH-213ENST00000641272 TEX22C9J3V5 150 aa12.63□□□□□ -0.39
PHGDH-213ENST00000641272 CREBL2O60519 120 aaPredicted RBP12.63□□□□□ -0.39
PHGDH-213ENST00000641272 CD36P16671 472 aa12.63□□□□□ -0.39
PHGDH-213ENST00000641272 GUCA2BQ16661 112 aa12.63□□□□□ -0.39
PHGDH-213ENST00000641272 FYTTD1Q96QD9 318 aaKnown RBP12.63□□□□□ -0.39
PHGDH-213ENST00000641272 SPATA2Q9UM82 520 aa12.63□□□□□ -0.39
PHGDH-213ENST00000641272 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP12.62□□□□□ -0.39
PHGDH-213ENST00000641272 TPPPO94811 219 aa12.62□□□□□ -0.39
PHGDH-213ENST00000641272 IGLV2-14P01704 120 aa12.62□□□□□ -0.39
PHGDH-213ENST00000641272 MYOD1P15172 320 aa12.62□□□□□ -0.39
PHGDH-213ENST00000641272 SSX9Q7RTT3 188 aa12.62□□□□□ -0.39
PHGDH-213ENST00000641272 NECAP1Q8NC96 275 aa12.62□□□□□ -0.39
PHGDH-213ENST00000641272 LGALS14Q8TCE9 139 aa12.62□□□□□ -0.39
PHGDH-213ENST00000641272 WDR89Q96FK6 387 aaPredicted RBP12.62□□□□□ -0.39
PHGDH-213ENST00000641272 HIPK2Q9H2X6 1198 aa12.62□□□□□ -0.39
PHGDH-213ENST00000641272 SRD5A3Q9H8P0 318 aa12.62□□□□□ -0.39
PHGDH-213ENST00000641272 TAS2R8Q9NYW2 309 aa12.62□□□□□ -0.39
PHGDH-213ENST00000641272 BLOC1S6Q9UL45 172 aa12.62□□□□□ -0.39
PHGDH-213ENST00000641272 PRELID3BQ9Y3B1 194 aa12.62□□□□□ -0.39
PHGDH-213ENST00000641272 OR2W1Q9Y3N9 320 aa12.62□□□□□ -0.39
PHGDH-213ENST00000641272 BIRC6Q9NR09 4857 aa12.62□□□□□ -0.39
PHGDH-213ENST00000641272 ALMS1Q8TCU4 4167 aa12.61□□□□□ -0.39
PHGDH-213ENST00000641272 A0A1B0GW64 132 aa12.61□□□□□ -0.39
PHGDH-213ENST00000641272 DPPA5A6NC42 116 aa12.61□□□□□ -0.39
PHGDH-213ENST00000641272 C2orf70A6NJV1 201 aa12.61□□□□□ -0.39
PHGDH-213ENST00000641272 SSX5O60225 188 aa12.61□□□□□ -0.39
PHGDH-213ENST00000641272 KBTBD11O94819 623 aa12.61□□□□□ -0.39
PHGDH-213ENST00000641272 REG1AP05451 166 aa12.61□□□□□ -0.39
PHGDH-213ENST00000641272 AREGP15514 252 aa12.61□□□□□ -0.39
PHGDH-213ENST00000641272 PSMB9P28065 219 aa12.61□□□□□ -0.39
PHGDH-213ENST00000641272 RPL27AP46776 148 aaKnown RBP12.61□□□□□ -0.39
PHGDH-213ENST00000641272 MECP2P51608 486 aaKnown RBP12.61□□□□□ -0.39
PHGDH-213ENST00000641272 GNG2P59768 71 aa12.61□□□□□ -0.39
PHGDH-213ENST00000641272 HACD4Q5VWC8 232 aa12.61□□□□□ -0.39
PHGDH-213ENST00000641272 TTC9CQ8N5M4 171 aa12.61□□□□□ -0.39
PHGDH-213ENST00000641272 OR2K2Q8NGT1 345 aa12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 113.4 ms