RNA–Protein interactions for RNA: ENST00000641213.1

PHGDH-211, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 2,053 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-211ENST00000641213 PRR30Q53SZ7 412 aaPredicted RBP14.07□□□□□ -0.16
PHGDH-211ENST00000641213 C2CD4CQ8TF44 421 aa14.07□□□□□ -0.16
PHGDH-211ENST00000641213 SNRNP40Q96DI7 357 aaKnown RBP14.07□□□□□ -0.16
PHGDH-211ENST00000641213 TRAV3A0A0B4J244 114 aa14.06□□□□□ -0.16
PHGDH-211ENST00000641213 MDKP21741 143 aaPredicted RBP14.06□□□□□ -0.16
PHGDH-211ENST00000641213 PLA2G5P39877 138 aa14.06□□□□□ -0.16
PHGDH-211ENST00000641213 ERVK-16P61578 105 aa14.06□□□□□ -0.16
PHGDH-211ENST00000641213 RELBQ01201 579 aa14.06□□□□□ -0.16
PHGDH-211ENST00000641213 HABP2Q14520 560 aaPredicted RBP14.06□□□□□ -0.16
PHGDH-211ENST00000641213 ZNF436-AS1Q8NC38 126 aaPredicted RBP14.06□□□□□ -0.16
PHGDH-211ENST00000641213 ZNF439Q8NDP4 499 aa14.06□□□□□ -0.16
PHGDH-211ENST00000641213 ZNF251Q9BRH9 671 aa14.06□□□□□ -0.16
PHGDH-211ENST00000641213 SLC39A9Q9NUM3 307 aa14.06□□□□□ -0.16
PHGDH-211ENST00000641213 PRELID1Q9Y255 219 aa14.06□□□□□ -0.16
PHGDH-211ENST00000641213 ZNF729A6NN14 1252 aaPredicted RBP14.06□□□□□ -0.16
PHGDH-211ENST00000641213 C17orf100A8MU93 164 aa14.06□□□□□ -0.16
PHGDH-211ENST00000641213 ATXN7O15265 892 aaPredicted RBP14.06□□□□□ -0.16
PHGDH-211ENST00000641213 EIF3GO75821 320 aaKnown RBP eCLIP14.06□□□□□ -0.16
PHGDH-211ENST00000641213 TNFRSF1AP19438 455 aa14.06□□□□□ -0.16
PHGDH-211ENST00000641213 ZCCHC24Q8N2G6 241 aaKnown RBP14.06□□□□□ -0.16
PHGDH-211ENST00000641213 FAM24BQ8N5W8 94 aa14.06□□□□□ -0.16
PHGDH-211ENST00000641213 OR52E5Q8NH55 327 aa14.06□□□□□ -0.16
PHGDH-211ENST00000641213 CORO2AQ92828 525 aa14.06□□□□□ -0.16
PHGDH-211ENST00000641213 TVP23CQ96ET8 276 aa14.06□□□□□ -0.16
PHGDH-211ENST00000641213 NIPSNAP3BQ9BS92 247 aa14.06□□□□□ -0.16
PHGDH-211ENST00000641213 NPCDR1Q9BY65 106 aa14.06□□□□□ -0.16
PHGDH-211ENST00000641213 LINC00574Q9H8X3 128 aa14.06□□□□□ -0.16
PHGDH-211ENST00000641213 TMEM140Q9NV12 185 aa14.06□□□□□ -0.16
PHGDH-211ENST00000641213 IDI2-AS1Q9NZ38 188 aa14.06□□□□□ -0.16
PHGDH-211ENST00000641213 DCHS1Q96JQ0 3298 aa14.05□□□□□ -0.16
PHGDH-211ENST00000641213 K7ENP7 123 aa14.05□□□□□ -0.16
PHGDH-211ENST00000641213 LY86O95711 162 aa14.05□□□□□ -0.16
PHGDH-211ENST00000641213 DLK1P80370 383 aa14.05□□□□□ -0.16
PHGDH-211ENST00000641213 PDLIM3Q53GG5 364 aaPredicted RBP14.05□□□□□ -0.16
PHGDH-211ENST00000641213 FAM90A2PQ658T7 463 aa14.05□□□□□ -0.16
PHGDH-211ENST00000641213 OR4S2Q8NH73 311 aa14.05□□□□□ -0.16
PHGDH-211ENST00000641213 DIRC2Q96SL1 478 aa14.05□□□□□ -0.16
PHGDH-211ENST00000641213 BIN3Q9NQY0 253 aa14.05□□□□□ -0.16
PHGDH-211ENST00000641213 KLF2Q9Y5W3 355 aaPredicted RBP14.05□□□□□ -0.16
PHGDH-211ENST00000641213 MMP23AO75900 390 aa14.05□□□□□ -0.16
PHGDH-211ENST00000641213 OR2C1O95371 312 aa14.05□□□□□ -0.16
PHGDH-211ENST00000641213 TAGLN2P37802 199 aaKnown RBP14.05□□□□□ -0.16
PHGDH-211ENST00000641213 RAB5BP61020 215 aa14.05□□□□□ -0.16
PHGDH-211ENST00000641213 RAB11AP62491 216 aa14.05□□□□□ -0.16
PHGDH-211ENST00000641213 PMS2P11Q13670 270 aa14.05□□□□□ -0.16
PHGDH-211ENST00000641213 CA5BP1Q8WTZ4 195 aa14.05□□□□□ -0.16
PHGDH-211ENST00000641213 LHX4Q969G2 390 aa14.05□□□□□ -0.16
PHGDH-211ENST00000641213 MBP02144 154 aa14.04□□□□□ -0.16
PHGDH-211ENST00000641213 RAB5AP20339 215 aa14.04□□□□□ -0.16
PHGDH-211ENST00000641213 VDAC2P45880 294 aaPredicted RBP14.04□□□□□ -0.16
PHGDH-211ENST00000641213 THBS3P49746 956 aa14.04□□□□□ -0.16
PHGDH-211ENST00000641213 MRPS11P82912 194 aaKnown RBP14.04□□□□□ -0.16
PHGDH-211ENST00000641213 FFAR4Q5NUL3 377 aa14.04□□□□□ -0.16
PHGDH-211ENST00000641213 SLC35E3Q7Z769 313 aa14.04□□□□□ -0.16
PHGDH-211ENST00000641213 LYG1Q8N1E2 194 aa14.04□□□□□ -0.16
PHGDH-211ENST00000641213 OR10G9Q8NGN4 311 aa14.04□□□□□ -0.16
PHGDH-211ENST00000641213 OR10G7Q8NGN6 311 aa14.04□□□□□ -0.16
PHGDH-211ENST00000641213 YPEL4Q96NS1 127 aa14.04□□□□□ -0.16
PHGDH-211ENST00000641213 P2RX4Q99571 388 aa14.04□□□□□ -0.16
PHGDH-211ENST00000641213 VAX2Q9UIW0 290 aa14.04□□□□□ -0.16
PHGDH-211ENST00000641213 A0A087WWC5 75 aa14.03□□□□□ -0.16
PHGDH-211ENST00000641213 hCG_1809904A0A1W2PP81 198 aa14.03□□□□□ -0.16
PHGDH-211ENST00000641213 A0A1W2PR64 198 aa14.03□□□□□ -0.16
PHGDH-211ENST00000641213 A0A1W2PRV1 198 aa14.03□□□□□ -0.16
PHGDH-211ENST00000641213 C1orf196B1AJZ1 125 aa14.03□□□□□ -0.16
PHGDH-211ENST00000641213 TMPRSS2O15393 492 aa14.03□□□□□ -0.16
PHGDH-211ENST00000641213 TLE1Q04724 770 aa14.03□□□□□ -0.16
PHGDH-211ENST00000641213 ADAM5Q6NVV9 412 aa14.03□□□□□ -0.16
PHGDH-211ENST00000641213 ZNF709Q8N972 641 aa14.03□□□□□ -0.16
PHGDH-211ENST00000641213 ZNF383Q8NA42 475 aa14.03□□□□□ -0.16
PHGDH-211ENST00000641213 SLC25A22Q9H936 323 aa14.03□□□□□ -0.16
PHGDH-211ENST00000641213 CTXND1A0A1B0GTU2 59 aa14.03□□□□□ -0.16
PHGDH-211ENST00000641213 IFNA1P01562 189 aa14.03□□□□□ -0.16
PHGDH-211ENST00000641213 IFNA10P01566 189 aa14.03□□□□□ -0.16
PHGDH-211ENST00000641213 MAS1LP35410 378 aa14.03□□□□□ -0.16
PHGDH-211ENST00000641213 GNG10P50151 68 aa14.03□□□□□ -0.16
PHGDH-211ENST00000641213 RPP30P78346 268 aaKnown RBP14.03□□□□□ -0.16
PHGDH-211ENST00000641213 SSX8Q7RTT4 187 aa14.03□□□□□ -0.16
PHGDH-211ENST00000641213 HEYLQ9NQ87 328 aaPredicted RBP14.03□□□□□ -0.16
PHGDH-211ENST00000641213 RPUSD1Q9UJJ7 312 aaKnown RBP14.03□□□□□ -0.16
PHGDH-211ENST00000641213 ROS1P08922 2347 aa14.03□□□□□ -0.16
PHGDH-211ENST00000641213 NKX6-3A6NJ46 265 aa14.02□□□□□ -0.16
PHGDH-211ENST00000641213 ZNF727A8MUV8 499 aa14.02□□□□□ -0.16
PHGDH-211ENST00000641213 HMGB3O15347 200 aaKnown RBP14.02□□□□□ -0.16
PHGDH-211ENST00000641213 NDUFB7P17568 137 aa14.02□□□□□ -0.16
PHGDH-211ENST00000641213 AGAP20933 346 aa14.02□□□□□ -0.16
PHGDH-211ENST00000641213 CD1BP29016 333 aa14.02□□□□□ -0.16
PHGDH-211ENST00000641213 Q8N7P7 452 aa14.02□□□□□ -0.16
PHGDH-211ENST00000641213 ADTRPQ96IZ2 230 aa14.02□□□□□ -0.16
PHGDH-211ENST00000641213 RHOVQ96L33 236 aa14.02□□□□□ -0.16
PHGDH-211ENST00000641213 WFIKKN1Q96NZ8 548 aa14.02□□□□□ -0.16
PHGDH-211ENST00000641213 WDR83OSQ9Y284 106 aa14.02□□□□□ -0.16
PHGDH-211ENST00000641213 hADV38S2A0JD32 116 aa14.02□□□□□ -0.17
PHGDH-211ENST00000641213 C17orf112F2Z3M2 114 aa14.02□□□□□ -0.17
PHGDH-211ENST00000641213 RRHO14718 337 aa14.02□□□□□ -0.17
PHGDH-211ENST00000641213 GFRA3O60609 400 aa14.02□□□□□ -0.17
PHGDH-211ENST00000641213 TMEM30BQ3MIR4 351 aa14.02□□□□□ -0.17
PHGDH-211ENST00000641213 OR4A47Q6IF82 309 aa14.02□□□□□ -0.17
PHGDH-211ENST00000641213 SLC25A48Q6ZT89 311 aaKnown RBP14.02□□□□□ -0.17
PHGDH-211ENST00000641213 TMPRSS5Q9H3S3 457 aa14.02□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms