RNA–Protein interactions for RNA: ENST00000640748.1

ERGIC3-220, Transcript of ERGIC and golgi 3, humanhuman

TSL 5 BASIC

Gene ERGIC3, Length 832 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERGIC3-220ENST00000640748 POMT1Q9Y6A1 747 aa9.66□□□□□ -0.86
ERGIC3-220ENST00000640748 PRKDCP78527 4128 aaKnown RBP9.66□□□□□ -0.86
ERGIC3-220ENST00000640748 CMYA5Q8N3K9 4069 aa9.66□□□□□ -0.86
ERGIC3-220ENST00000640748 IGHV3OR16-10A0A075B7F0 116 aa9.65□□□□□ -0.86
ERGIC3-220ENST00000640748 A0A1B0GU03 582 aa9.65□□□□□ -0.86
ERGIC3-220ENST00000640748 E5RGE8 158 aa9.65□□□□□ -0.86
ERGIC3-220ENST00000640748 M0R1X1 148 aa9.65□□□□□ -0.86
ERGIC3-220ENST00000640748 RAB29O14966 203 aa9.65□□□□□ -0.86
ERGIC3-220ENST00000640748 SLC31A2O15432 143 aa9.65□□□□□ -0.86
ERGIC3-220ENST00000640748 IGKV1-39P01597 117 aa9.65□□□□□ -0.86
ERGIC3-220ENST00000640748 IGKV1D-39P04432 117 aa9.65□□□□□ -0.86
ERGIC3-220ENST00000640748 CCL3L1P16619 93 aa9.65□□□□□ -0.86
ERGIC3-220ENST00000640748 MDKP21741 143 aaPredicted RBP9.65□□□□□ -0.86
ERGIC3-220ENST00000640748 NKX2-1P43699 371 aaPredicted RBP9.65□□□□□ -0.86
ERGIC3-220ENST00000640748 ZNF134P52741 427 aa9.65□□□□□ -0.86
ERGIC3-220ENST00000640748 AKR1C2P52895 323 aa9.65□□□□□ -0.86
ERGIC3-220ENST00000640748 CT45A1Q5HYN5 189 aa9.65□□□□□ -0.86
ERGIC3-220ENST00000640748 HEPN1Q6WQI6 88 aa9.65□□□□□ -0.86
ERGIC3-220ENST00000640748 SPAG16Q8N0X2 631 aa9.65□□□□□ -0.86
ERGIC3-220ENST00000640748 ZNF439Q8NDP4 499 aa9.65□□□□□ -0.86
ERGIC3-220ENST00000640748 ZNF680Q8NEM1 530 aa9.65□□□□□ -0.86
ERGIC3-220ENST00000640748 OR8B3Q8NGG8 313 aa9.65□□□□□ -0.86
ERGIC3-220ENST00000640748 CT45A3Q8NHU0 189 aa9.65□□□□□ -0.86
ERGIC3-220ENST00000640748 CD300LFQ8TDQ1 290 aa9.65□□□□□ -0.86
ERGIC3-220ENST00000640748 LEAP2Q969E1 77 aa9.65□□□□□ -0.86
ERGIC3-220ENST00000640748 NEIL1Q96FI4 390 aaPredicted RBP9.65□□□□□ -0.86
ERGIC3-220ENST00000640748 AQP10Q96PS8 301 aa9.65□□□□□ -0.86
ERGIC3-220ENST00000640748 OR8B2Q96RD0 313 aa9.65□□□□□ -0.86
ERGIC3-220ENST00000640748 ARPC5LQ9BPX5 153 aa9.65□□□□□ -0.86
ERGIC3-220ENST00000640748 PLEKHA2Q9HB19 425 aa9.65□□□□□ -0.86
ERGIC3-220ENST00000640748 NSG2Q9Y328 171 aa9.65□□□□□ -0.86
ERGIC3-220ENST00000640748 MDFIC2A0A1B0GVS7 189 aa9.64□□□□□ -0.87
ERGIC3-220ENST00000640748 A0A1W2PPH5 198 aa9.64□□□□□ -0.87
ERGIC3-220ENST00000640748 C17orf98A8MV24 154 aa9.64□□□□□ -0.87
ERGIC3-220ENST00000640748 MMP23AO75900 390 aa9.64□□□□□ -0.87
ERGIC3-220ENST00000640748 IGHV3-7P01780 117 aa9.64□□□□□ -0.87
ERGIC3-220ENST00000640748 PPIAL4GP0DN37 164 aa9.64□□□□□ -0.87
ERGIC3-220ENST00000640748 PVALBP20472 110 aaPredicted RBP9.64□□□□□ -0.87
ERGIC3-220ENST00000640748 DUTP33316 252 aaKnown RBP9.64□□□□□ -0.87
ERGIC3-220ENST00000640748 KIR2DS2P43631 304 aa9.64□□□□□ -0.87
ERGIC3-220ENST00000640748 GNG10P50151 68 aa9.64□□□□□ -0.87
ERGIC3-220ENST00000640748 OR2B11Q5JQS5 317 aa9.64□□□□□ -0.87
ERGIC3-220ENST00000640748 FAM219AQ8IW50 185 aa9.64□□□□□ -0.87
ERGIC3-220ENST00000640748 ADTRPQ96IZ2 230 aa9.64□□□□□ -0.87
ERGIC3-220ENST00000640748 MS4A7Q9GZW8 240 aaPredicted RBP9.64□□□□□ -0.87
ERGIC3-220ENST00000640748 ZC4H2Q9NQZ6 224 aa9.64□□□□□ -0.87
ERGIC3-220ENST00000640748 UBQLN2Q9UHD9 624 aa9.64□□□□□ -0.87
ERGIC3-220ENST00000640748 PRELID3BQ9Y3B1 194 aa9.64□□□□□ -0.87
ERGIC3-220ENST00000640748 MMP24Q9Y5R2 645 aa9.64□□□□□ -0.87
ERGIC3-220ENST00000640748 WNK1Q9H4A3 2382 aa9.63□□□□□ -0.87
ERGIC3-220ENST00000640748 A0A0G2JRQ6 117 aa9.63□□□□□ -0.87
ERGIC3-220ENST00000640748 A0A1W2PPE3 182 aa9.63□□□□□ -0.87
ERGIC3-220ENST00000640748 LINC00473A8K010 186 aa9.63□□□□□ -0.87
ERGIC3-220ENST00000640748 WRBO00258 174 aa9.63□□□□□ -0.87
ERGIC3-220ENST00000640748 IGKV1-5P01602 117 aa9.63□□□□□ -0.87
ERGIC3-220ENST00000640748 MMP9P14780 707 aa9.63□□□□□ -0.87
ERGIC3-220ENST00000640748 RPL12P30050 165 aaKnown RBP9.63□□□□□ -0.87
ERGIC3-220ENST00000640748 P2RY1P47900 373 aa9.63□□□□□ -0.87
ERGIC3-220ENST00000640748 THBS3P49746 956 aa9.63□□□□□ -0.87
ERGIC3-220ENST00000640748 ZNF816Q0VGE8 651 aaPredicted RBP9.63□□□□□ -0.87
ERGIC3-220ENST00000640748 EXOSC2Q13868 293 aaKnown RBP9.63□□□□□ -0.87
ERGIC3-220ENST00000640748 RPL39P5Q59GN2 51 aa9.63□□□□□ -0.87
ERGIC3-220ENST00000640748 ZNF841Q6ZN19 808 aa9.63□□□□□ -0.87
ERGIC3-220ENST00000640748 SLC25A48Q6ZT89 311 aaKnown RBP9.63□□□□□ -0.87
ERGIC3-220ENST00000640748 LYG1Q8N1E2 194 aa9.63□□□□□ -0.87
ERGIC3-220ENST00000640748 S1PR3Q99500 378 aa9.63□□□□□ -0.87
ERGIC3-220ENST00000640748 SSBP3Q9BWW4 388 aaPredicted RBP9.63□□□□□ -0.87
ERGIC3-220ENST00000640748 PRDM13Q9H4Q3 707 aa9.63□□□□□ -0.87
ERGIC3-220ENST00000640748 SAA2-SAA4A0A096LPE2 208 aa9.62□□□□□ -0.87
ERGIC3-220ENST00000640748 IGHV2-70DA0A0C4DH43 119 aa9.62□□□□□ -0.87
ERGIC3-220ENST00000640748 MSGN1A6NI15 193 aa9.62□□□□□ -0.87
ERGIC3-220ENST00000640748 TAAR5O14804 337 aa9.62□□□□□ -0.87
ERGIC3-220ENST00000640748 RBFOX2O43251 390 aaKnown RBP eCLIP9.62□□□□□ -0.87
ERGIC3-220ENST00000640748 GPR137BO60478 399 aa9.62□□□□□ -0.87
ERGIC3-220ENST00000640748 RAMP3O60896 148 aa9.62□□□□□ -0.87
ERGIC3-220ENST00000640748 FCGR3BO75015 233 aa9.62□□□□□ -0.87
ERGIC3-220ENST00000640748 PROP1O75360 226 aa9.62□□□□□ -0.87
ERGIC3-220ENST00000640748 PITX3O75364 302 aa9.62□□□□□ -0.87
ERGIC3-220ENST00000640748 S1PR2O95136 353 aa9.62□□□□□ -0.87
ERGIC3-220ENST00000640748 HPRT1P00492 218 aa9.62□□□□□ -0.87
ERGIC3-220ENST00000640748 CFDP00746 253 aaPredicted RBP9.62□□□□□ -0.87
ERGIC3-220ENST00000640748 SAA2P0DJI9 122 aaPredicted RBP9.62□□□□□ -0.87
ERGIC3-220ENST00000640748 HTR2BP41595 481 aa9.62□□□□□ -0.87
ERGIC3-220ENST00000640748 DLX6P56179 175 aa9.62□□□□□ -0.87
ERGIC3-220ENST00000640748 VAMP2P63027 116 aa9.62□□□□□ -0.87
ERGIC3-220ENST00000640748 ID3Q02535 119 aa9.62□□□□□ -0.87
ERGIC3-220ENST00000640748 MIDNQ504T8 468 aa9.62□□□□□ -0.87
ERGIC3-220ENST00000640748 GPR157Q5UAW9 335 aa9.62□□□□□ -0.87
ERGIC3-220ENST00000640748 WDR25Q64LD2 544 aaPredicted RBP9.62□□□□□ -0.87
ERGIC3-220ENST00000640748 NCR3LG1Q68D85 454 aa9.62□□□□□ -0.87
ERGIC3-220ENST00000640748 LINC00311Q8N616 119 aa9.62□□□□□ -0.87
ERGIC3-220ENST00000640748 C8orf31Q8N9H6 132 aa9.62□□□□□ -0.87
ERGIC3-220ENST00000640748 DMBX1Q8NFW5 382 aa9.62□□□□□ -0.87
ERGIC3-220ENST00000640748 C8orf46Q8TAG6 207 aa9.62□□□□□ -0.87
ERGIC3-220ENST00000640748 WFDC12Q8WWY7 111 aa9.62□□□□□ -0.87
ERGIC3-220ENST00000640748 ZNF471Q9BX82 626 aaPredicted RBP9.62□□□□□ -0.87
ERGIC3-220ENST00000640748 CACNG5Q9UF02 275 aa9.62□□□□□ -0.87
ERGIC3-220ENST00000640748 SESN1Q9Y6P5 492 aa9.62□□□□□ -0.87
ERGIC3-220ENST00000640748 TRAV40A0A0B4J280 105 aa9.61□□□□□ -0.87
ERGIC3-220ENST00000640748 HOXA3O43365 443 aaPredicted RBP9.61□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 58 ms