RNA–Protein interactions for RNA: ENST00000639856.1

TRIM3-215, Transcript of tripartite motif containing 3, humanhuman

TSL 5 BASIC

Gene TRIM3, Length 2,137 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM3-215ENST00000639856 CENPVQ7Z7K6 275 aaPredicted RBP12.44□□□□□ -0.42
TRIM3-215ENST00000639856 DIRC2Q96SL1 478 aa12.44□□□□□ -0.42
TRIM3-215ENST00000639856 PRELID3BQ9Y3B1 194 aa12.44□□□□□ -0.42
TRIM3-215ENST00000639856 TIMM9Q9Y5J7 89 aa12.44□□□□□ -0.42
TRIM3-215ENST00000639856 FAM90A9PA6NNJ1 464 aa12.44□□□□□ -0.42
TRIM3-215ENST00000639856 RBFOX2O43251 390 aaKnown RBP eCLIP12.44□□□□□ -0.42
TRIM3-215ENST00000639856 IGHV3-7P01780 117 aa12.44□□□□□ -0.42
TRIM3-215ENST00000639856 IRF2P14316 349 aa12.44□□□□□ -0.42
TRIM3-215ENST00000639856 RPL39P5Q59GN2 51 aa12.44□□□□□ -0.42
TRIM3-215ENST00000639856 TMEM41BQ5BJD5 291 aa12.44□□□□□ -0.42
TRIM3-215ENST00000639856 FAM216BQ8N7L0 139 aa12.44□□□□□ -0.42
TRIM3-215ENST00000639856 OR10P1Q8NGE3 313 aa12.44□□□□□ -0.42
TRIM3-215ENST00000639856 RCC1LQ96I51 464 aaKnown RBP12.44□□□□□ -0.42
TRIM3-215ENST00000639856 GAFA1Q96PS6 74 aa12.44□□□□□ -0.42
TRIM3-215ENST00000639856 CCL13Q99616 98 aa12.44□□□□□ -0.42
TRIM3-215ENST00000639856 TMEM147Q9BVK8 224 aa12.44□□□□□ -0.42
TRIM3-215ENST00000639856 EGLN1Q9GZT9 426 aa12.44□□□□□ -0.42
TRIM3-215ENST00000639856 DYNLRB1Q9NP97 96 aa12.44□□□□□ -0.42
TRIM3-215ENST00000639856 GAB2Q9UQC2 676 aa12.44□□□□□ -0.42
TRIM3-215ENST00000639856 PUS1Q9Y606 427 aaKnown RBP eCLIP12.44□□□□□ -0.42
TRIM3-215ENST00000639856 KBTBD11-OT1A0A1B0GTJ5 212 aa12.43□□□□□ -0.42
TRIM3-215ENST00000639856 CEBPZOSA8MTT3 80 aa12.43□□□□□ -0.42
TRIM3-215ENST00000639856 VSTM5A8MXK1 200 aa12.43□□□□□ -0.42
TRIM3-215ENST00000639856 OR9G9P0C7N8 305 aa12.43□□□□□ -0.42
TRIM3-215ENST00000639856 RAB7AP51149 207 aa12.43□□□□□ -0.42
TRIM3-215ENST00000639856 AARDQ4LEZ3 155 aa12.43□□□□□ -0.42
TRIM3-215ENST00000639856 ZNF787Q6DD87 383 aa12.43□□□□□ -0.42
TRIM3-215ENST00000639856 GFOD1Q9NXC2 390 aa12.43□□□□□ -0.42
TRIM3-215ENST00000639856 CISD1Q9NZ45 108 aaKnown RBP12.43□□□□□ -0.42
TRIM3-215ENST00000639856 TRGV10A0A0A0MS01 117 aa12.43□□□□□ -0.42
TRIM3-215ENST00000639856 APOBEC3AP31941 199 aaPredicted RBP12.43□□□□□ -0.42
TRIM3-215ENST00000639856 ZNF788Q6ZQV5 615 aa12.43□□□□□ -0.42
TRIM3-215ENST00000639856 QTRT1Q9BXR0 403 aaKnown RBP12.43□□□□□ -0.42
TRIM3-215ENST00000639856 FAM234AQ9H0X4 552 aa12.43□□□□□ -0.42
TRIM3-215ENST00000639856 ZNF665Q9H7R5 613 aa12.43□□□□□ -0.42
TRIM3-215ENST00000639856 GNG13Q9P2W3 67 aa12.43□□□□□ -0.42
TRIM3-215ENST00000639856 LOC102723971A0A1B0GUV8 181 aa12.42□□□□□ -0.42
TRIM3-215ENST00000639856 SLC31A2O15432 143 aa12.42□□□□□ -0.42
TRIM3-215ENST00000639856 FOLR2P14207 255 aa12.42□□□□□ -0.42
TRIM3-215ENST00000639856 DAOP14920 347 aa12.42□□□□□ -0.42
TRIM3-215ENST00000639856 GNLYP22749 145 aa12.42□□□□□ -0.42
TRIM3-215ENST00000639856 TEX36Q5VZQ5 186 aa12.42□□□□□ -0.42
TRIM3-215ENST00000639856 LCN15Q6UWW0 184 aa12.42□□□□□ -0.42
TRIM3-215ENST00000639856 SSX7Q7RTT5 188 aa12.42□□□□□ -0.42
TRIM3-215ENST00000639856 CYB561D1Q8N8Q1 229 aa12.42□□□□□ -0.42
TRIM3-215ENST00000639856 CCL17Q92583 94 aa12.42□□□□□ -0.42
TRIM3-215ENST00000639856 S1PR3Q99500 378 aa12.42□□□□□ -0.42
TRIM3-215ENST00000639856 H3BQ15 152 aa12.41□□□□□ -0.42
TRIM3-215ENST00000639856 FBP1P09467 338 aa12.41□□□□□ -0.42
TRIM3-215ENST00000639856 LOXP28300 417 aaPredicted RBP12.41□□□□□ -0.42
TRIM3-215ENST00000639856 KIR2DS2P43631 304 aa12.41□□□□□ -0.42
TRIM3-215ENST00000639856 RAB13P51153 203 aa12.41□□□□□ -0.42
TRIM3-215ENST00000639856 ELLP55199 621 aaPredicted RBP12.41□□□□□ -0.42
TRIM3-215ENST00000639856 OR2B8PP59922 312 aa12.41□□□□□ -0.42
TRIM3-215ENST00000639856 GNB2P62879 340 aa12.41□□□□□ -0.42
TRIM3-215ENST00000639856 CTAG1AP78358 180 aa12.41□□□□□ -0.42
TRIM3-215ENST00000639856 EFNB3Q15768 340 aa12.41□□□□□ -0.42
TRIM3-215ENST00000639856 SPINK9Q5DT21 86 aa12.41□□□□□ -0.42
TRIM3-215ENST00000639856 CT45A1Q5HYN5 189 aa12.41□□□□□ -0.42
TRIM3-215ENST00000639856 UTF1Q5T230 341 aa12.41□□□□□ -0.42
TRIM3-215ENST00000639856 PRAMEF5Q5TYX0 476 aa12.41□□□□□ -0.42
TRIM3-215ENST00000639856 CT45A3Q8NHU0 189 aa12.41□□□□□ -0.42
TRIM3-215ENST00000639856 DDB2Q92466 427 aa12.41□□□□□ -0.42
TRIM3-215ENST00000639856 LEAP2Q969E1 77 aa12.41□□□□□ -0.42
TRIM3-215ENST00000639856 HIST1H2BAQ96A08 127 aa12.41□□□□□ -0.42
TRIM3-215ENST00000639856 LY86O95711 162 aa12.41□□□□□ -0.42
TRIM3-215ENST00000639856 IFNA17P01571 189 aa12.41□□□□□ -0.42
TRIM3-215ENST00000639856 MT-ND4LP03901 98 aa12.41□□□□□ -0.42
TRIM3-215ENST00000639856 NQO2P16083 231 aa12.41□□□□□ -0.42
TRIM3-215ENST00000639856 CEBPGP53567 150 aa12.41□□□□□ -0.42
TRIM3-215ENST00000639856 ERVK-16P61578 105 aa12.41□□□□□ -0.42
TRIM3-215ENST00000639856 VWC2Q2TAL6 325 aa12.41□□□□□ -0.42
TRIM3-215ENST00000639856 SSX9Q7RTT3 188 aa12.41□□□□□ -0.42
TRIM3-215ENST00000639856 TCF23Q7RTU1 214 aa12.41□□□□□ -0.42
TRIM3-215ENST00000639856 ZNF436-AS1Q8NC38 126 aaPredicted RBP12.41□□□□□ -0.42
TRIM3-215ENST00000639856 OR10G4Q8NGN3 311 aa12.41□□□□□ -0.42
TRIM3-215ENST00000639856 ISOC2Q96AB3 205 aa12.41□□□□□ -0.42
TRIM3-215ENST00000639856 DCHS2Q6V1P9 2916 aa12.41□□□□□ -0.42
TRIM3-215ENST00000639856 CACNA1BQ00975 2339 aa12.4□□□□□ -0.42
TRIM3-215ENST00000639856 ZFP92A6NM28 416 aa12.4□□□□□ -0.42
TRIM3-215ENST00000639856 TMEM178BH3BS89 294 aa12.4□□□□□ -0.42
TRIM3-215ENST00000639856 BCL2P10415 239 aa12.4□□□□□ -0.42
TRIM3-215ENST00000639856 FGF8P55075 233 aaPredicted RBP12.4□□□□□ -0.42
TRIM3-215ENST00000639856 C1orf229Q6ZS94 237 aaPredicted RBP12.4□□□□□ -0.42
TRIM3-215ENST00000639856 RPP25LQ8N5L8 163 aaKnown RBP12.4□□□□□ -0.42
TRIM3-215ENST00000639856 OR4A16Q8NH70 328 aa12.4□□□□□ -0.42
TRIM3-215ENST00000639856 LINC00574Q9H8X3 128 aa12.4□□□□□ -0.42
TRIM3-215ENST00000639856 ZFYVE26Q68DK2 2539 aa12.4□□□□□ -0.42
TRIM3-215ENST00000639856 MAP1LC3B2A6NCE7 125 aa12.4□□□□□ -0.43
TRIM3-215ENST00000639856 ZNF729A6NN14 1252 aaPredicted RBP12.4□□□□□ -0.43
TRIM3-215ENST00000639856 C15orf62A8K5M9 175 aa12.4□□□□□ -0.43
TRIM3-215ENST00000639856 B9A039 149 aa12.4□□□□□ -0.43
TRIM3-215ENST00000639856 TMPRSS2O15393 492 aa12.4□□□□□ -0.43
TRIM3-215ENST00000639856 IGKV1D-33P01593 117 aa12.4□□□□□ -0.43
TRIM3-215ENST00000639856 IGKV1-33P01594 117 aa12.4□□□□□ -0.43
TRIM3-215ENST00000639856 FGF7P21781 194 aa12.4□□□□□ -0.43
TRIM3-215ENST00000639856 SPCS3P61009 180 aa12.4□□□□□ -0.43
TRIM3-215ENST00000639856 RNF212Q495C1 297 aa12.4□□□□□ -0.43
TRIM3-215ENST00000639856 ZNF672Q499Z4 452 aaPredicted RBP12.4□□□□□ -0.43
TRIM3-215ENST00000639856 ZNF429Q86V71 674 aa12.4□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 97.3 ms