RNA–Protein interactions for RNA: ENST00000639501.1

PMS1-222, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 5 BASIC

Gene PMS1, Length 2,506 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-222ENST00000639501 CHRNB4P30926 498 aa17.11■□□□□ 0.33
PMS1-222ENST00000639501 IER3P46695 156 aa17.11■□□□□ 0.33
PMS1-222ENST00000639501 NRN1LQ496H8 165 aa17.11■□□□□ 0.33
PMS1-222ENST00000639501 OR2M7Q8NG81 312 aa17.11■□□□□ 0.33
PMS1-222ENST00000639501 OR52L2PQ8NGH6 319 aa17.11■□□□□ 0.33
PMS1-222ENST00000639501 YTHDF2Q9Y5A9 579 aaKnown RBP17.11■□□□□ 0.33
PMS1-222ENST00000639501 A0A1W2PPV4 95 aa17.11■□□□□ 0.33
PMS1-222ENST00000639501 SH2D1BO14796 132 aa17.11■□□□□ 0.33
PMS1-222ENST00000639501 KRTDAPP60985 99 aa17.11■□□□□ 0.33
PMS1-222ENST00000639501 RANP62826 216 aaKnown RBP17.11■□□□□ 0.33
PMS1-222ENST00000639501 COL5A1-AS1Q5SY13 56 aa17.11■□□□□ 0.33
PMS1-222ENST00000639501 QTRT1Q9BXR0 403 aaKnown RBP17.11■□□□□ 0.33
PMS1-222ENST00000639501 ZFP30Q9Y2G7 519 aa17.11■□□□□ 0.33
PMS1-222ENST00000639501 J3QT63 122 aa17.1■□□□□ 0.33
PMS1-222ENST00000639501 GDF1P27539 372 aa17.1■□□□□ 0.33
PMS1-222ENST00000639501 TUSC5Q8IXB3 177 aa17.1■□□□□ 0.33
PMS1-222ENST00000639501 RAB1CQ92928 201 aa17.1■□□□□ 0.33
PMS1-222ENST00000639501 TMEM45BQ96B21 275 aa17.1■□□□□ 0.33
PMS1-222ENST00000639501 IL36BQ9NZH7 164 aa17.1■□□□□ 0.33
PMS1-222ENST00000639501 FCN1O00602 326 aa17.1■□□□□ 0.33
PMS1-222ENST00000639501 NDUFB8O95169 186 aa17.1■□□□□ 0.33
PMS1-222ENST00000639501 CD1BP29016 333 aa17.1■□□□□ 0.33
PMS1-222ENST00000639501 CTRLP40313 264 aa17.1■□□□□ 0.33
PMS1-222ENST00000639501 STPG4Q8N801 248 aa17.1■□□□□ 0.33
PMS1-222ENST00000639501 PKIBQ9C010 78 aa17.1■□□□□ 0.33
PMS1-222ENST00000639501 FOXJ2Q9P0K8 574 aa17.1■□□□□ 0.33
PMS1-222ENST00000639501 YLPM1P49750 1951 aaKnown RBP17.09■□□□□ 0.33
PMS1-222ENST00000639501 NBEAQ8NFP9 2946 aa17.09■□□□□ 0.33
PMS1-222ENST00000639501 NEURL1O76050 574 aa17.09■□□□□ 0.33
PMS1-222ENST00000639501 LYSMD4Q5XG99 296 aa17.09■□□□□ 0.33
PMS1-222ENST00000639501 FBXW9Q5XUX1 488 aa17.09■□□□□ 0.33
PMS1-222ENST00000639501 GNB4Q9HAV0 340 aa17.09■□□□□ 0.33
PMS1-222ENST00000639501 WIPI2Q9Y4P8 454 aa17.09■□□□□ 0.33
PMS1-222ENST00000639501 MPC1Q9Y5U8 109 aa17.09■□□□□ 0.33
PMS1-222ENST00000639501 SNURFLB1AK76 121 aa17.09■□□□□ 0.33
PMS1-222ENST00000639501 GFRA1P56159 465 aa17.09■□□□□ 0.33
PMS1-222ENST00000639501 LGALS4P56470 323 aa17.09■□□□□ 0.33
PMS1-222ENST00000639501 CIB3Q96Q77 187 aaPredicted RBP17.09■□□□□ 0.33
PMS1-222ENST00000639501 LINC00473A8K010 186 aa17.08■□□□□ 0.33
PMS1-222ENST00000639501 CYC1P08574 325 aa17.08■□□□□ 0.33
PMS1-222ENST00000639501 TMEM249Q2WGJ8 235 aa17.08■□□□□ 0.33
PMS1-222ENST00000639501 PMS2CLQ68D20 193 aa17.08■□□□□ 0.33
PMS1-222ENST00000639501 H2BFWTQ7Z2G1 175 aa17.08■□□□□ 0.33
PMS1-222ENST00000639501 KMT2EQ8IZD2 1858 aa17.08■□□□□ 0.33
PMS1-222ENST00000639501 SLC35E1Q96K37 410 aa17.08■□□□□ 0.33
PMS1-222ENST00000639501 C12orf77C9JDV5 145 aa17.08■□□□□ 0.32
PMS1-222ENST00000639501 AQP7O14520 342 aa17.08■□□□□ 0.32
PMS1-222ENST00000639501 PSPNO60542 156 aa17.08■□□□□ 0.32
PMS1-222ENST00000639501 CLDN14O95500 239 aa17.08■□□□□ 0.32
PMS1-222ENST00000639501 TGFBR3Q03167 851 aa17.08■□□□□ 0.32
PMS1-222ENST00000639501 Q0VFX4 171 aa17.08■□□□□ 0.32
PMS1-222ENST00000639501 MIC13Q5XKP0 118 aa17.08■□□□□ 0.32
PMS1-222ENST00000639501 RCHY1Q96PM5 261 aa17.08■□□□□ 0.32
PMS1-222ENST00000639501 DIRC3C9JPN6 131 aa17.07■□□□□ 0.32
PMS1-222ENST00000639501 MT-CO3P00414 261 aa17.07■□□□□ 0.32
PMS1-222ENST00000639501 CCL4P13236 92 aa17.07■□□□□ 0.32
PMS1-222ENST00000639501 SPATA45Q537H7 98 aa17.07■□□□□ 0.32
PMS1-222ENST00000639501 SCCPDHQ8NBX0 429 aa17.07■□□□□ 0.32
PMS1-222ENST00000639501 ST6GALNAC3Q8NDV1 305 aa17.07■□□□□ 0.32
PMS1-222ENST00000639501 TBL2Q9Y4P3 447 aaKnown RBP17.07■□□□□ 0.32
PMS1-222ENST00000639501 RAB29O14966 203 aa17.07■□□□□ 0.32
PMS1-222ENST00000639501 SPINK4O60575 86 aa17.07■□□□□ 0.32
PMS1-222ENST00000639501 TFF1P04155 84 aa17.07■□□□□ 0.32
PMS1-222ENST00000639501 GPX1P07203 203 aa17.07■□□□□ 0.32
PMS1-222ENST00000639501 STAG3L2P0CL84 134 aa17.07■□□□□ 0.32
PMS1-222ENST00000639501 STAG3L3P0CL85 134 aa17.07■□□□□ 0.32
PMS1-222ENST00000639501 RPL31P62899 125 aaKnown RBP17.07■□□□□ 0.32
PMS1-222ENST00000639501 ZNF718Q3SXZ3 478 aa17.07■□□□□ 0.32
PMS1-222ENST00000639501 VASH2Q86V25 355 aa17.07■□□□□ 0.32
PMS1-222ENST00000639501 MGST2Q99735 147 aa17.07■□□□□ 0.32
PMS1-222ENST00000639501 RAC2P15153 192 aa17.06■□□□□ 0.32
PMS1-222ENST00000639501 ERVK11-1P61568 191 aa17.06■□□□□ 0.32
PMS1-222ENST00000639501 Q0VG73 95 aa17.06■□□□□ 0.32
PMS1-222ENST00000639501 SPATA31B1PQ5VZV4 182 aa17.06■□□□□ 0.32
PMS1-222ENST00000639501 SIGLECL1Q8N7X8 197 aa17.06■□□□□ 0.32
PMS1-222ENST00000639501 OR4B1Q8NGF8 309 aa17.06■□□□□ 0.32
PMS1-222ENST00000639501 LINC00470Q9BZP3 86 aa17.06■□□□□ 0.32
PMS1-222ENST00000639501 FAM186AA6NE01 2351 aa17.06■□□□□ 0.32
PMS1-222ENST00000639501 IGKV3D-15A0A087WSY6 115 aa17.06■□□□□ 0.32
PMS1-222ENST00000639501 CELA3AP09093 270 aa17.06■□□□□ 0.32
PMS1-222ENST00000639501 OR9G9P0C7N8 305 aa17.06■□□□□ 0.32
PMS1-222ENST00000639501 GNG10P50151 68 aa17.06■□□□□ 0.32
PMS1-222ENST00000639501 KIAA1644Q3SXP7 199 aa17.06■□□□□ 0.32
PMS1-222ENST00000639501 TREML4Q6UXN2 200 aa17.06■□□□□ 0.32
PMS1-222ENST00000639501 Q6ZVH6 145 aa17.06■□□□□ 0.32
PMS1-222ENST00000639501 CDIPTO14735 213 aa17.05■□□□□ 0.32
PMS1-222ENST00000639501 C1orf174Q8IYL3 243 aa17.05■□□□□ 0.32
PMS1-222ENST00000639501 OR8I2Q8N0Y5 310 aa17.05■□□□□ 0.32
PMS1-222ENST00000639501 OR2Y1Q8NGV0 311 aa17.05■□□□□ 0.32
PMS1-222ENST00000639501 ASCL3Q9NQ33 180 aa17.05■□□□□ 0.32
PMS1-222ENST00000639501 NXPH2O95156 264 aa17.05■□□□□ 0.32
PMS1-222ENST00000639501 CATR1Q13166 79 aa17.05■□□□□ 0.32
PMS1-222ENST00000639501 MMD2Q8IY49 270 aa17.05■□□□□ 0.32
PMS1-222ENST00000639501 GGTLC1Q9BX51 225 aa17.05■□□□□ 0.32
PMS1-222ENST00000639501 SLC45A2Q9UMX9 530 aa17.05■□□□□ 0.32
PMS1-222ENST00000639501 PTPRBP23467 1997 aa17.04■□□□□ 0.32
PMS1-222ENST00000639501 RNASE8Q8TDE3 154 aaKnown RBP17.04■□□□□ 0.32
PMS1-222ENST00000639501 GALMQ96C23 342 aa17.04■□□□□ 0.32
PMS1-222ENST00000639501 RNF2Q99496 336 aa17.04■□□□□ 0.32
PMS1-222ENST00000639501 MS4A5Q9H3V2 200 aa17.04■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms